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2 changes: 1 addition & 1 deletion docs/copying.html
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<html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
<head>
<meta http-equiv="content-type" content="text/html; charset=utf-8" />
<meta name="date" content="2024-05-13"/>
<meta name="date" content="2024-05-16"/>
<meta name="generator" content="generate_html 0.3.3" />
<meta name="author" content="Andrew Penn" />
<meta name="description" content="A package for statistical analysis using resampling methods." />
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6 changes: 3 additions & 3 deletions docs/description.json
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@@ -1,14 +1,14 @@
{
"generator": "generate_html",
"generator_version": "0.3.3",
"date_generated": "2024-05-13",
"date_generated": "2024-05-16",
"package":
{
"name": "statistics-resampling",
"version": "5.5.11",
"version": "5.5.12",
"description": "The statistics-resampling package is an Octave package and Matlab toolbox that can be used to perform a wide variety of statistics tasks using non-parametric resampling methods. In particular, the functions included can be used to estimate bias, uncertainty (standard errors and confidence intervals), prediction error, and calculate p-values for null hypothesis significance tests. Variations of the resampling methods are included that improve the accuracy of the statistics for small samples and samples with complex dependence structures.",
"shortdescription": "The statistics-resampling package is an Octave package and Matlab toolbox that can be used to perform a wide variety of statistics tasks using non-parametric resampling methods",
"date": "2024-05-13",
"date": "2024-05-15",
"title": "A statistics package with a variety of resampling tools",
"author": "Andrew Penn <[email protected]>",
"maintainer": "Andrew Penn <[email protected]>",
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2 changes: 1 addition & 1 deletion docs/function/boot.html
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<html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
<head>
<meta http-equiv="content-type" content="text/html; charset=utf-8" />
<meta name="date" content="2024-05-13"/>
<meta name="date" content="2024-05-16"/>
<meta name="generator" content="generate_html 0.3.3" />
<meta name="author" content="Andrew Penn" />
<meta name="description" content="A package for statistical analysis using resampling methods." />
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6 changes: 3 additions & 3 deletions docs/function/boot1way.html
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<html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
<head>
<meta http-equiv="content-type" content="text/html; charset=utf-8" />
<meta name="date" content="2024-05-13"/>
<meta name="date" content="2024-05-16"/>
<meta name="generator" content="generate_html 0.3.3" />
<meta name="author" content="Andrew Penn" />
<meta name="description" content="A package for statistical analysis using resampling methods." />
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-----------------------------------------------------------------------------
| Comparison | Test # | Ref # | Difference | t | p |
|------------|------------|------------|------------|------------|----------|
| 1 | 2 | 1 | -0.3684 | -0.63 | .564 |
| 1 | 2 | 1 | +0.8304 | +1.63 | .161 |

-----------------------------------------------------------------------------
| GROUP # | GROUP label | N |
Expand Down Expand Up @@ -574,7 +574,7 @@ <h3><a name="8">Demonstration 8</a></h3>
-----------------------------------------------------------------------------
| Comparison | Test # | Ref # | Difference | t | p |
|------------|------------|------------|------------|------------|----------|
| 1 | 2 | 1 | +0.3039 | +0.44 | .600 |
| 1 | 2 | 1 | +0.6446 | +1.33 | .078 |

-----------------------------------------------------------------------------
| GROUP # | GROUP label | N |
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8 changes: 4 additions & 4 deletions docs/function/bootbayes.html
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<html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
<head>
<meta http-equiv="content-type" content="text/html; charset=utf-8" />
<meta name="date" content="2024-05-13"/>
<meta name="date" content="2024-05-16"/>
<meta name="generator" content="generate_html 0.3.3" />
<meta name="author" content="Andrew Penn" />
<meta name="description" content="A package for statistical analysis using resampling methods." />
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Posterior Statistics:
original bias median stdev CI_lower CI_upper
+184.5 +0.01529 +184.5 1.351 +181.7 +187.2</pre>
+184.5 -0.02210 +184.5 1.240 +182.1 +186.9</pre>
</div>

<h3><a name="2">Demonstration 2</a></h3>
Expand Down Expand Up @@ -228,8 +228,8 @@ <h3><a name="2">Demonstration 2</a></h3>

Posterior Statistics:
original bias median stdev CI_lower CI_upper
+175.5 -0.07775 +175.4 2.287 +171.1 +179.9
+0.1904 +0.002169 +0.1929 0.07622 +0.03454 +0.3340</pre>
+175.5 +0.03532 +175.5 2.384 +171.1 +180.3
+0.1904 -0.001074 +0.1909 0.07912 +0.04160 +0.3442</pre>
</div>

<p>Package: <a href="../index.html">statistics-resampling</a></p>
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2 changes: 1 addition & 1 deletion docs/function/bootcdf.html
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<html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
<head>
<meta http-equiv="content-type" content="text/html; charset=utf-8" />
<meta name="date" content="2024-05-13"/>
<meta name="date" content="2024-05-16"/>
<meta name="generator" content="generate_html 0.3.3" />
<meta name="author" content="Andrew Penn" />
<meta name="description" content="A package for statistical analysis using resampling methods." />
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6 changes: 3 additions & 3 deletions docs/function/bootci.html
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<html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
<head>
<meta http-equiv="content-type" content="text/html; charset=utf-8" />
<meta name="date" content="2024-05-13"/>
<meta name="date" content="2024-05-16"/>
<meta name="generator" content="generate_html 0.3.3" />
<meta name="author" content="Andrew Penn" />
<meta name="description" content="A package for statistical analysis using resampling methods." />
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<p>Produces the following output</p>
<pre class="example">ci =

-0.13896 -0.72921
0.7127 0.31607</pre>
-0.74781 -0.35862
0.276 0.50962</pre>
</div>

<h3><a name="11">Demonstration 11</a></h3>
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18 changes: 9 additions & 9 deletions docs/function/bootclust.html
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<html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
<head>
<meta http-equiv="content-type" content="text/html; charset=utf-8" />
<meta name="date" content="2024-05-13"/>
<meta name="date" content="2024-05-16"/>
<meta name="generator" content="generate_html 0.3.3" />
<meta name="author" content="Andrew Penn" />
<meta name="description" content="A package for statistical analysis using resampling methods." />
Expand Down Expand Up @@ -43,10 +43,10 @@ <h2>bootclust</h2>
cluster/block (i.e. no clustering or blocking). The means of the resamples
are then computed and the following statistics are displayed:
- original: the original estimate(s) calculated by BOOTFUN and the DATA
- bias: bootstrap bias of the estimate(s)
- std_error: bootstrap standard error of the estimate(s)
- CI_lower: lower bound(s) of the 95% bootstrap confidence interval
- CI_upper: upper bound(s) of the 95% bootstrap confidence interval
- bias: bootstrap estimate of the bias of the sampling distribution(s)
- std_error: bootstrap estimate(s) of the standard error(s)
- CI_lower: lower bound(s) of the 95% bootstrap confidence interval(s)
- CI_upper: upper bound(s) of the 95% bootstrap confidence interval(s)

'bootclust (DATA, NBOOT)' specifies the number of bootstrap resamples,
where NBOOT is a scalar, positive integer corresponding to the number
Expand Down Expand Up @@ -376,8 +376,8 @@ <h3><a name="7">Demonstration 7</a></h3>

Bootstrap Statistics:
original bias std_error CI_lower CI_upper
+0.3052 -0.01557 +0.2059 -0.007480 +0.6725
-0.1663 +0.02261 +0.1710 -0.4057 +0.1247</pre>
+0.3625 -0.01706 +0.2193 +0.01007 +0.7266
+0.2251 +0.001246 +0.2250 -0.1672 +0.5763</pre>
</div>

<h3><a name="8">Demonstration 8</a></h3>
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Bootstrap Statistics:
original bias std_error CI_lower CI_upper
+0.1401 +0.006113 +0.2929 -0.4786 +0.5297
+0.04985 +0.009865 +0.1333 -0.1655 +0.2615</pre>
+0.1434 +0.02090 +0.1595 -0.03552 +0.4799
-0.1623 +0.01750 +0.1080 -0.3331 +0.005695</pre>
</div>

<h3><a name="9">Demonstration 9</a></h3>
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2 changes: 1 addition & 1 deletion docs/function/bootint.html
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<html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
<head>
<meta http-equiv="content-type" content="text/html; charset=utf-8" />
<meta name="date" content="2024-05-13"/>
<meta name="date" content="2024-05-16"/>
<meta name="generator" content="generate_html 0.3.3" />
<meta name="author" content="Andrew Penn" />
<meta name="description" content="A package for statistical analysis using resampling methods." />
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14 changes: 7 additions & 7 deletions docs/function/bootknife.html
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<html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
<head>
<meta http-equiv="content-type" content="text/html; charset=utf-8" />
<meta name="date" content="2024-05-13"/>
<meta name="date" content="2024-05-16"/>
<meta name="generator" content="generate_html 0.3.3" />
<meta name="author" content="Andrew Penn" />
<meta name="description" content="A package for statistical analysis using resampling methods." />
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(column vector or matrix) and compute their means and display the
following statistics:
- original: the original estimate(s) calculated by BOOTFUN and the DATA
- bias: bootstrap bias of the estimate(s)
- std_error: bootstrap standard error of the estimate(s)
- CI_lower: lower bound(s) of the 95% bootstrap confidence interval
- CI_upper: upper bound(s) of the 95% bootstrap confidence interval
- bias: bootstrap estimate of the bias of the sampling distribution(s)
- std_error: bootstrap estimate(s) of the standard error(s)
- CI_lower: lower bound(s) of the 95% bootstrap confidence interval(s)
- CI_upper: upper bound(s) of the 95% bootstrap confidence interval(s)

'bootknife (DATA, NBOOT)' specifies the number of bootstrap resamples,
where NBOOT can be either:
Expand Down Expand Up @@ -442,8 +442,8 @@ <h3><a name="8">Demonstration 8</a></h3>

Bootstrap Statistics:
original bias std_error CI_lower CI_upper
+0.1034 -0.001186 +0.1974 -0.1832 +0.4674
-0.04645 +0.004099 +0.2699 -0.3929 +0.5239</pre>
+0.1331 -0.01506 +0.2166 -0.2376 +0.4716
-0.5121 +0.01136 +0.1966 -0.9021 -0.2342</pre>
</div>

<h3><a name="9">Demonstration 9</a></h3>
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2 changes: 1 addition & 1 deletion docs/function/bootlm.html
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<html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
<head>
<meta http-equiv="content-type" content="text/html; charset=utf-8" />
<meta name="date" content="2024-05-13"/>
<meta name="date" content="2024-05-16"/>
<meta name="generator" content="generate_html 0.3.3" />
<meta name="author" content="Andrew Penn" />
<meta name="description" content="A package for statistical analysis using resampling methods." />
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6 changes: 3 additions & 3 deletions docs/function/bootmode.html
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<html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
<head>
<meta http-equiv="content-type" content="text/html; charset=utf-8" />
<meta name="date" content="2024-05-13"/>
<meta name="date" content="2024-05-16"/>
<meta name="generator" content="generate_html 0.3.3" />
<meta name="author" content="Andrew Penn" />
<meta name="description" content="A package for statistical analysis using resampling methods." />
Expand Down Expand Up @@ -149,9 +149,9 @@ <h3><a name="1">Demonstration 1</a></h3>
<p>Produces the following output</p>
<pre class="example">ans = Summary of results:

ans = H1 is 1 with p = 0.001 so reject the null hypothesisthat there is 1 mode
ans = H1 is 1 with p = 0.0005 so reject the null hypothesisthat there is 1 mode

ans = H2 is 0 with p = 0.314 so accept the null hypothesis that there are 2 modes</pre>
ans = H2 is 0 with p = 0.343 so accept the null hypothesis that there are 2 modes</pre>
</div>

<p>Package: <a href="../index.html">statistics-resampling</a></p>
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7 changes: 4 additions & 3 deletions docs/function/bootstrp.html
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<html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
<head>
<meta http-equiv="content-type" content="text/html; charset=utf-8" />
<meta name="date" content="2024-05-13"/>
<meta name="date" content="2024-05-16"/>
<meta name="generator" content="generate_html 0.3.3" />
<meta name="author" content="Andrew Penn" />
<meta name="description" content="A package for statistical analysis using resampling methods." />
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'[BOOTSTAT, BOOTSAM, STATS] = bootstrp (...)' also calculates and returns
the following basic statistics relating to each column of BOOTSTAT:
- original: the original estimate(s) calculated by BOOTFUN and the DATA
- bias: bootstrap bias of the estimate(s)
- mean: the mean of the bootstrap distribution(s)
- bias: bootstrap estimate of the bias of the sampling distribution(s)
- bias_corrected: original estimate(s) after subtracting the bias
- var: bootstrap variance of the original estimate(s)
- std_error: bootstrap standard error of the original estimate(s)
- std_error: bootstrap estimate(s) of the standard error(s)
If BOOTSTAT is not numeric, STATS only returns the 'original' field. If
BOOTFUN is empty, then the value of the 'original' field is also empty.

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10 changes: 5 additions & 5 deletions docs/function/bootwild.html
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<html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
<head>
<meta http-equiv="content-type" content="text/html; charset=utf-8" />
<meta name="date" content="2024-05-13"/>
<meta name="date" content="2024-05-16"/>
<meta name="generator" content="generate_html 0.3.3" />
<meta name="author" content="Andrew Penn" />
<meta name="description" content="A package for statistical analysis using resampling methods." />
Expand Down Expand Up @@ -42,7 +42,7 @@ <h2>bootwild</h2>
p-values after imposing the null hypothesis (H0) [1-4]. The following
statistics are printed to the standard output:
- original: the mean of the data vector y
- std_err: heteroscedasticity-consistent standard error(s)
- std_err: heteroscedasticity-consistent standard error(s) (HC0)
- CI_lower: lower bound(s) of the 95% bootstrap-t confidence interval
- CI_upper: upper bound(s) of the 95% bootstrap-t confidence interval
- tstat: Student's t-statistic
Expand Down Expand Up @@ -180,7 +180,7 @@ <h3><a name="1">Demonstration 1</a></h3>

Test Statistics:
original std_err CI_lower CI_upper t-stat p-val FPR
+184.5 +1.243 +181.6 +187.4 +148. <.001 .010</pre>
+184.5 +1.243 +181.7 +187.3 +148. <.001 .010</pre>
</div>

<h3><a name="2">Demonstration 2</a></h3>
Expand Down Expand Up @@ -218,8 +218,8 @@ <h3><a name="2">Demonstration 2</a></h3>

Test Statistics:
original std_err CI_lower CI_upper t-stat p-val FPR
+175.5 +2.502 +169.8 +181.2 +70.1 <.001 .010
+0.1904 +0.08261 +0.003534 +0.3773 +2.31 .047 .280</pre>
+175.5 +2.502 +169.9 +181.1 +70.1 <.001 .010
+0.1904 +0.08261 +0.01031 +0.3705 +2.31 .039 .257</pre>
</div>

<p>Package: <a href="../index.html">statistics-resampling</a></p>
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2 changes: 1 addition & 1 deletion docs/function/cor.html
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<html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
<head>
<meta http-equiv="content-type" content="text/html; charset=utf-8" />
<meta name="date" content="2024-05-13"/>
<meta name="date" content="2024-05-16"/>
<meta name="generator" content="generate_html 0.3.3" />
<meta name="author" content="Andrew Penn" />
<meta name="description" content="A package for statistical analysis using resampling methods." />
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2 changes: 1 addition & 1 deletion docs/function/credint.html
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<html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
<head>
<meta http-equiv="content-type" content="text/html; charset=utf-8" />
<meta name="date" content="2024-05-13"/>
<meta name="date" content="2024-05-16"/>
<meta name="generator" content="generate_html 0.3.3" />
<meta name="author" content="Andrew Penn" />
<meta name="description" content="A package for statistical analysis using resampling methods." />
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2 changes: 1 addition & 1 deletion docs/function/deffcalc.html
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<html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
<head>
<meta http-equiv="content-type" content="text/html; charset=utf-8" />
<meta name="date" content="2024-05-13"/>
<meta name="date" content="2024-05-16"/>
<meta name="generator" content="generate_html 0.3.3" />
<meta name="author" content="Andrew Penn" />
<meta name="description" content="A package for statistical analysis using resampling methods." />
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6 changes: 3 additions & 3 deletions docs/function/randtest.html
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<html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
<head>
<meta http-equiv="content-type" content="text/html; charset=utf-8" />
<meta name="date" content="2024-05-13"/>
<meta name="date" content="2024-05-16"/>
<meta name="generator" content="generate_html 0.3.3" />
<meta name="author" content="Andrew Penn" />
<meta name="description" content="A package for statistical analysis using resampling methods." />
Expand Down Expand Up @@ -146,8 +146,8 @@ <h3><a name="2">Demonstration 2</a></h3>
<p>Produces the following output</p>
<pre class="example">pval =

0.53148
0.00049014
0.53905
0.0002

stat =

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2 changes: 1 addition & 1 deletion docs/function/randtest1.html
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<html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
<head>
<meta http-equiv="content-type" content="text/html; charset=utf-8" />
<meta name="date" content="2024-05-13"/>
<meta name="date" content="2024-05-16"/>
<meta name="generator" content="generate_html 0.3.3" />
<meta name="author" content="Andrew Penn" />
<meta name="description" content="A package for statistical analysis using resampling methods." />
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8 changes: 4 additions & 4 deletions docs/function/randtest2.html
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<html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
<head>
<meta http-equiv="content-type" content="text/html; charset=utf-8" />
<meta name="date" content="2024-05-13"/>
<meta name="date" content="2024-05-16"/>
<meta name="generator" content="generate_html 0.3.3" />
<meta name="author" content="Andrew Penn" />
<meta name="description" content="A package for statistical analysis using resampling methods." />
Expand Down Expand Up @@ -162,9 +162,9 @@ <h3><a name="1">Demonstration 1</a></h3>
@(A, B) log (var (A) ./ var (B)))
</pre>
<p>Produces the following output</p>
<pre class="example">pval = 0.3668
pval = 0.2698
pval = 0.30905</pre>
<pre class="example">pval = 0.3526
pval = 0.2718
pval = 0.31043</pre>
</div>

<h3><a name="2">Demonstration 2</a></h3>
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2 changes: 1 addition & 1 deletion docs/function/sampszcalc.html
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<html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
<head>
<meta http-equiv="content-type" content="text/html; charset=utf-8" />
<meta name="date" content="2024-05-13"/>
<meta name="date" content="2024-05-16"/>
<meta name="generator" content="generate_html 0.3.3" />
<meta name="author" content="Andrew Penn" />
<meta name="description" content="A package for statistical analysis using resampling methods." />
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2 changes: 1 addition & 1 deletion docs/function/smoothmad.html
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<html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
<head>
<meta http-equiv="content-type" content="text/html; charset=utf-8" />
<meta name="date" content="2024-05-13"/>
<meta name="date" content="2024-05-16"/>
<meta name="generator" content="generate_html 0.3.3" />
<meta name="author" content="Andrew Penn" />
<meta name="description" content="A package for statistical analysis using resampling methods." />
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