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Sync dependencies on develop with main #302

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wants to merge 6 commits into from
Closed

Sync dependencies on develop with main #302

wants to merge 6 commits into from

Commits on Nov 1, 2023

  1. Relaxes scipy (#300)

    **Context:**
    Relaxes dependency versions in pyproject.toml.
    
    **Description of the Change:**
    
    **Benefits:**
    
    **Possible Drawbacks:**
    
    **Related GitHub Issues:**
    zeyueN authored Nov 1, 2023
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Commits on Feb 6, 2024

  1. Release v0.7.0 (#336)

    ### New features
    * Added a new interface for backends, as well as a `numpy` backend
    (which is now default). Users can run
    all the functions in the `utils`, `math`, `physics`, and `lab` with both
    backends, while `training`
    requires using `tensorflow`. The `numpy` backend provides significant
    improvements both in import
    time and runtime.
    [(#301)](#301)
    
    * Added the classes and methods to create, contract, and draw tensor
    networks with `mrmustard.math`.
      [(#284)](#284)
    
    * Added functions in physics.bargmann to join and contract (A,b,c)
    triples.
      [(#295)](#295)
    
    * Added an Ansatz abstract class and PolyExpAnsatz concrete
    implementation. This is used in the Bargmann representation.
      [(#295)](#295)
    
    * Added `complex_gaussian_integral` and `real_gaussian_integral`
    methods.
      [(#295)](#295)
    
    * Added `Bargmann` representation (parametrized by Abc). Supports all
    algebraic operations and CV (exact) inner product.
      [(#296)](#296)
    
    ### Breaking changes
    * Removed circular dependencies by:
    * Removing `graphics.py`--moved `ProgressBar` to `training` and
    `mikkel_plot` to `lab`.
      * Moving `circuit_drawer` and `wigner` to `physics`.
      * Moving `xptensor` to `math`.
      [(#289)](#289)
    
    * Created `settings.py` file to host `Settings`.
      [(#289)](#289)
    
    * Moved `settings.py`, `logger.py`, and `typing.py` to `utils`.
      [(#289)](#289)
    
    * Removed the `Math` class. To use the mathematical backend, replace
    `from mrmustard.math import Math ; math = Math()` with `import
    mrmustard.math as math`
      in your scripts.
      [(#301)](#301)
    
    * The `numpy` backend is now default. To switch to the `tensorflow`
    backend, add the line `math.change_backend("tensorflow")` to your
    scripts.
      [(#301)](#301)
    
    ### Improvements
    
    * Calculating Fock representations and their gradients is now more
    numerically stable (i.e. numerical blowups that
    result from repeatedly applying the recurrence relation are postponed to
    higher cutoff values).
    This holds for both the "vanilla strategy"
    [(#274)](#274) and for the
    "diagonal strategy" and "single leftover mode strategy"
    [(#288)](#288).
    This is done by representing Fock amplitudes with a higher precision
    than complex128 (countering floating-point errors).
    We run Julia code via PyJulia (where Numba was used before) to keep the
    code fast.
    The precision is controlled by `setting
    settings.PRECISION_BITS_HERMITE_POLY`. The default value is ``128``,
    which uses the old Numba code. When setting to a higher value, the new
    Julia code is run.
    
    * Replaced parameters in `training` with `Constant` and `Variable`
    classes.
      [(#298)](#298)
    
    * Improved how states, transformations, and detectors deal with
    parameters by replacing the `Parametrized` class with `ParameterSet`.
      [(#298)](#298)
    
    * Includes julia dependencies into the python packaging for downstream
    installation reproducibility.
    Removes dependency on tomli to load pyproject.toml for version info,
    uses importlib.metadata instead.
      [(#303)](#303)
      [(#304)](#304)
    
    * Improves the algorithms implemented in `vanilla` and `vanilla_vjp` to
    achieve a speedup.
    Specifically, the improved algorithms work on flattened arrays (which
    are reshaped before being returned) as opposed to multi-dimensional
    array.
      [(#312)](#312)
      [(#318)](#318)
    
    * Adds functions `hermite_renormalized_batch` and
    `hermite_renormalized_diagonal_batch` to speed up calculating
      Hermite polynomials over a batch of B vectors.
      [(#308)](#308)
    
    * Added suite to filter undesired warnings, and used it to filter
    tensorflow's ``ComplexWarning``s.
      [(#332)](#332)
    
    
    ### Bug fixes
    
    * Added the missing `shape` input parameters to all methods `U` in the
    `gates.py` file.
    [(#291)](#291)
    * Fixed inconsistent use of `atol` in purity evaluation for Gaussian
    states.
    [(#294)](#294)
    * Fixed the documentations for loss_XYd and amp_XYd functions for
    Gaussian channels.
    [(#305)](#305)
    * Replaced all instances of `np.empty` with `np.zeros` to fix
    instabilities.
    [(#309)](#309)
    
    ---------
    
    Co-authored-by: Sebastián Duque Mesa <[email protected]>
    Co-authored-by: JacobHast <[email protected]>
    Co-authored-by: elib20 <[email protected]>
    Co-authored-by: ziofil <[email protected]>
    Co-authored-by: ziofil <[email protected]>
    Co-authored-by: Luke Helt <[email protected]>
    Co-authored-by: zeyueN <[email protected]>
    Co-authored-by: Robbe De Prins <[email protected]>
    Co-authored-by: Robbe De Prins (UGent-imec) <[email protected]>
    Co-authored-by: Yuan <[email protected]>
    Co-authored-by: Ryk <[email protected]>
    Co-authored-by: Gabriele Gullì <[email protected]>
    Co-authored-by: Yuan Yao <[email protected]>
    Co-authored-by: Yuan Yao <[email protected]>
    Co-authored-by: heltluke <[email protected]>
    Co-authored-by: Tanner Rogalsky <[email protected]>
    Co-authored-by: Jan Provazník <[email protected]>
    18 people authored Feb 6, 2024
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Commits on Feb 8, 2024

  1. Updating upload.yml to run Julia tests (#340)

    Updates the `upload.yml` file so that before running the tests, it sets
    Julia up (version `1.9.3`).
    This setup now matches closely to that in the other `.yml` files, in
    particular to that in `build.yml`
    
    ---------
    
    Co-authored-by: Sebastián Duque Mesa <[email protected]>
    Co-authored-by: JacobHast <[email protected]>
    Co-authored-by: elib20 <[email protected]>
    Co-authored-by: ziofil <[email protected]>
    Co-authored-by: ziofil <[email protected]>
    Co-authored-by: Luke Helt <[email protected]>
    Co-authored-by: zeyueN <[email protected]>
    Co-authored-by: Robbe De Prins <[email protected]>
    Co-authored-by: Robbe De Prins (UGent-imec) <[email protected]>
    Co-authored-by: Yuan <[email protected]>
    Co-authored-by: Ryk <[email protected]>
    Co-authored-by: Gabriele Gullì <[email protected]>
    Co-authored-by: Yuan Yao <[email protected]>
    Co-authored-by: Yuan Yao <[email protected]>
    Co-authored-by: heltluke <[email protected]>
    Co-authored-by: Tanner Rogalsky <[email protected]>
    Co-authored-by: Jan Provazník <[email protected]>
    18 people authored Feb 8, 2024
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Commits on Feb 28, 2024

  1. Release v0.7.1 (#352)

    ### New features
    * Added functions to generate the ``(A, b, c)`` triples for the
    Fock-Bargmann representation of
    several states and gates.
    [(#338)](#338)
    
    ### Breaking changes
    
    ### Improvements
    
    ### Bug fixes
    * Fixing a bug in `_transform_gaussian` in transformation.py that
    modifies the input state's cov and means.
    [(#349)](#349)
    * Fixing a bug in `general_dyne` in physics/gaussian.py that returns the
    wrong probability and outcomes with given projection.
    [(#349)](#349)
    
    ### Documentation
    
    ### Tests
    
    ### Contributors
    @SamFerracin @ziofil @sylviemonet
    
    ---------
    
    Co-authored-by: Sebastián Duque Mesa <[email protected]>
    Co-authored-by: JacobHast <[email protected]>
    Co-authored-by: elib20 <[email protected]>
    Co-authored-by: ziofil <[email protected]>
    Co-authored-by: ziofil <[email protected]>
    Co-authored-by: Luke Helt <[email protected]>
    Co-authored-by: zeyueN <[email protected]>
    Co-authored-by: Robbe De Prins <[email protected]>
    Co-authored-by: Robbe De Prins (UGent-imec) <[email protected]>
    Co-authored-by: Yuan <[email protected]>
    Co-authored-by: Ryk <[email protected]>
    Co-authored-by: Gabriele Gullì <[email protected]>
    Co-authored-by: Yuan Yao <[email protected]>
    Co-authored-by: Yuan Yao <[email protected]>
    Co-authored-by: heltluke <[email protected]>
    Co-authored-by: Tanner Rogalsky <[email protected]>
    Co-authored-by: Jan Provazník <[email protected]>
    18 people authored Feb 28, 2024
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Commits on Mar 28, 2024

  1. Bumping tensorflow-macos to v2.15 (#375)

    **Context:**
    Bumping `tensorflow-macos` to v2.15
    SamFerracin authored Mar 28, 2024
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  2. Reconciling versions (#376)

    **Context:**
    There is a mismatch of tags, this reconciles
    SamFerracin authored Mar 28, 2024
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