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@erinyoung erinyoung released this 09 Jul 22:00
· 155 commits to master since this release
6f3584d

Moderate release because of new included genome and new profile!

  • added mpox ref (closes #342)
    • use with params.primer_set = "mpx_yale" or use mpx_yale profile.

Minor updates and bug fixes:

  • updates freyja to 1.5.1-07_02_2024-01-27-2024-07-09
  • updates nextclade to 3.8.0
  • updates pangolin to 4.3.1-pdata-1.28.1
  • fixes extra rows in vadr (see #344)
  • adjusts versions of tools in summary file
  • fixes multifasta summary file issue (closes #148)
  • added new tests to GA