Change Referral Pathway for TB when consumables not available: Try X-ray at level 1b and then 2, and then clinical diagnosis #4806
Workflow file for this run
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name: CI | |
on: | |
push: | |
branches: "master" | |
tags: ["*"] | |
pull_request: | |
schedule: | |
- cron: 0 0 * * * | |
env: | |
LD_PRELOAD: /lib/x86_64-linux-gnu/libSegFault.so | |
SEGFAULT_SIGNALS: all | |
jobs: | |
gen-test-matrix: | |
name: Find test files | |
if: "!contains(github.event.head_commit.message, '[skip ci]')" | |
runs-on: [self-hosted] | |
outputs: | |
matrix: ${{ steps.set-matrix.outputs.matrix }} | |
strategy: | |
fail-fast: false | |
steps: | |
- uses: actions/checkout@v3 | |
with: | |
lfs: true | |
- id: set-matrix | |
name: Set matrix | |
run: | | |
set -e | |
# Find all test files and generate their list in JSON format | |
VAR_FILES="{\"include\":[" | |
for file in tests/test_*.py; do | |
VAR_FILES="${VAR_FILES}{\"file\":\"${file}\"}," | |
done | |
VAR_FILES="${VAR_FILES}]}" | |
echo $VAR_FILES | |
echo "matrix=${VAR_FILES}" >> $GITHUB_OUTPUT | |
test: | |
needs: gen-test-matrix | |
if: "!contains(github.event.head_commit.message, '[skip ci]')" | |
name: Test ${{ matrix.file }} | |
runs-on: [self-hosted] | |
strategy: | |
fail-fast: false | |
matrix: ${{ fromJson(needs.gen-test-matrix.outputs.matrix) }} | |
steps: | |
- uses: actions/checkout@v3 | |
with: | |
lfs: true | |
- name: System info | |
run: | | |
set -x | |
python --version | |
uname -a | |
lsb_release -a | |
virtualenv --version | |
pip --version | |
tox --version | |
- name: Test with tox | |
run: | | |
tox -v -e py38,report -- pytest --cov --cov-report=term-missing -vv "${{ matrix.file }}" | |
check: | |
name: Checks | |
if: "!contains(github.event.head_commit.message, '[skip ci]')" | |
runs-on: [self-hosted] | |
strategy: | |
fail-fast: false | |
steps: | |
- uses: actions/checkout@v3 | |
with: | |
lfs: true | |
- name: System info | |
run: | | |
set -x | |
python --version | |
uname -a | |
lsb_release -a | |
virtualenv --version | |
pip --version | |
tox --version | |
- name: Run checks | |
run: tox -v -e check | |
docs: | |
name: Documentation | |
if: "!contains(github.event.head_commit.message, '[skip ci]')" | |
runs-on: [self-hosted] | |
strategy: | |
fail-fast: false | |
steps: | |
- uses: actions/checkout@v3 | |
with: | |
lfs: true | |
- name: System info | |
run: | | |
set -x | |
python --version | |
uname -a | |
lsb_release -a | |
virtualenv --version | |
pip --version | |
tox --version | |
- name: Build documentation | |
run: tox -v -e docs |