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Remove default_mem_mb from the cookie-cutter #49

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leoisl opened this issue Apr 13, 2022 · 2 comments
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Remove default_mem_mb from the cookie-cutter #49

leoisl opened this issue Apr 13, 2022 · 2 comments

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@leoisl
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leoisl commented Apr 13, 2022

See #45 (comment) and #45 (comment)
@mbhall88
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and #41

@leoisl
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leoisl commented Apr 19, 2022

Sorry, I embarrassingly had not fully understood snakemake --profile parameter although I contribute to this project :( . After re-reading it and playing with some directives in the config.yaml, I realised we can actually specify not only default mem_mb, but also disk_mb and tmpdir. Closing this in favour of #50

@leoisl leoisl closed this as completed Apr 19, 2022
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@leoisl @mbhall88