code cleaning; fixes OpenMP statements

.github/workflows/CI.yml

@@ -575,7 +575,7 @@ jobs:
       shell: bash
 
   linuxTest_12:
-    name: Test run example 11 - Marmousi2
+    name: Test run example 12 - Marmousi2
     runs-on: ubuntu-latest
     needs: [linuxCheck]
 

CITATION.cff

@@ -10,8 +10,7 @@ type: software
 identifiers:
   - type: doi
   - value: 10.5281/zenodo.10415228
-license:
-- gpl-3.0-or-later
+license: "GPL-3.0"
 
 authors:
 - family-names: Komatitsch

EXAMPLES/Industrial_Format_SEP/interpolate.f90

@@ -343,7 +343,7 @@ subroutine READ_SEP_HEADER(sep_directory,sep_header_file, &
   integer :: ier
   character(len=512) :: junk,sep_header_file_complete
 
-  sep_header_file_complete=trim(adjustl(sep_directory))//trim(adjustl(sep_header_file))
+  sep_header_file_complete = trim(adjustl(sep_directory))//trim(adjustl(sep_header_file))
 
   open(unit=13,file=trim(adjustl(sep_header_file_complete)),status='old',iostat=ier)
   print *
@@ -365,8 +365,8 @@ subroutine READ_SEP_HEADER(sep_directory,sep_header_file, &
   read(13,'(a6i10)')     junk, esize
   read(13,'(a13a)')    junk, data_format
   close(13)
-  sep_file=trim(adjustl(sep_directory))//trim(adjustl(sep_file))
-  data_format=data_format(1:len_trim(adjustl(data_format))-1)
+  sep_file = trim(adjustl(sep_directory))//trim(adjustl(sep_file))
+  data_format = data_format(1:len_trim(adjustl(data_format))-1)
 
   print *
   print *, 'sep file specified in the header file is: ', trim(adjustl(sep_file))

EXAMPLES/Marmousi_mesh_of_the_model/CUBIT_meshing/README.md

@@ -28,7 +28,7 @@ Just run in consecutive order, or open in CUBIT/Trelis -> run script:
   ```
   ./5_convert_surface_rock_to_velocities.py
   ```
-  to create a file nummaterial_velocity_file_marmousi2. This will assign the original water layer to the mesh. 
+  to create a file nummaterial_velocity_file_marmousi2. This will assign the original water layer to the mesh.
   To replace the water layer with solid velocities as in Capdeville et al. 2010, use
   ```
   ./5_convert_surface_rock_to_velocities.py --without-water
@@ -39,9 +39,9 @@ Just run in consecutive order, or open in CUBIT/Trelis -> run script:
 To run these python scripts in the command line, instead of opening the Cubit application and use the "run script"-Button,
 you will need to make sure that within the python environment you can load the "cubit" module.
 
-The most recent Coreform-Cubit version is 2023.11. It uses internally a python3.10 version. 
+The most recent Coreform-Cubit version is 2023.11. It uses internally a python3.10 version.
 The details below describe how such a installation setup could look like for MacOS.
- 
+
 * for MacOS:
    it requires to run this python script with the shipped Cubit version python
    (due to different architecture compilations).
@@ -60,7 +60,7 @@ The details below describe how such a installation setup could look like for Mac
      ```
 
      or create a symbolic link to the python version in `/usr/local/bin`:
-     ``` 
+     ```
      sudo ln -s /Applications/Coreform-Cubit-2023.11.app/Contents/lib/python3/Python.framework/Versions/3.10/python3.10 python-cubit
      ```
 
@@ -69,6 +69,6 @@ The details below describe how such a installation setup could look like for Mac
    - to import the cubit module, this also requires to add the Cubit library path to the `PYTHONPATH` environment variable, in `~/.bashrc` use:
      ```
      export PYTHONPATH=$PYTHONPATH:${CUBITDIR}/Contents/lib/
-     ``` 
+     ```
 
 

EXAMPLES/README.md

@@ -3,13 +3,13 @@ README
 
 This directory contains a set of examples to familiarize yourself with different modeling setups and for testing purposes.
 
-Each example requires a `Par_file`, `SOURCE`, and either a file of interfaces OR an external mesh. 
+Each example requires a `Par_file`, `SOURCE`, and either a file of interfaces OR an external mesh.
 The examples can be run in the current example directory, using the processing script:
 ```
 ./run_this_example.sh
 ```
 
-If you're interested in how to setup and run a simple SPECFEM2D simulation, 
+If you're interested in how to setup and run a simple SPECFEM2D simulation,
 we suggest to look at the **simple_topography_and_also_a_simple_fluid_layer/** example.
 
 Please **consider submitting your own example** to this package!

EXAMPLES/Tape2007_kernel/adj_seismogram_Tape2007.f90

@@ -188,7 +188,7 @@ program adj_seismogram
            ft_bar(:) = 0.d0
         endif
 
-        do itime =1,NSTEP
+        do itime = 1,NSTEP
            if (icomp == adj_comp) then
               write(11,*) (itime-1)*deltat - t0, ft_bar(itime)
            else

EXAMPLES/Tromp2005_kernel/adj_seismogram_Tromp2005.f90

@@ -221,7 +221,7 @@ program adj_seismogram
            ft_bar(:) = 0.d0
         endif
 
-        do itime =1,NSTEP
+        do itime = 1,NSTEP
            if (icomp == adj_comp) then
               write(11,*) (itime-1)*deltat - t0, ft_bar(itime)
            else