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Reactome and neo4j 5 #247

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EvanDietzMorris opened this issue Jul 31, 2024 · 0 comments
Open

Reactome and neo4j 5 #247

EvanDietzMorris opened this issue Jul 31, 2024 · 0 comments

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@EvanDietzMorris
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Unfortunately the Reactome parser broke with the neo4j 5 implementation for ORION because their neo4j dump is neo4j 4.x

https://reactome.org/dev/graph-database

We probably just need to add the migration command as an option (neo4j-admin database migrate --force-btree-indexes-to-range) in neo4j_tools and have Reactome call that.
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@EvanDietzMorris