Welcome to the PRIDE (PRoteomics IDEntifications) Database GitHub organization! We're dedicated to advancing proteomics research through open data sharing and standardization.

The PRIDE Database is a leading repository for mass spectrometry-based proteomics data, maintained by the European Bioinformatics Institute (EMBL-EBI). Our mission is to:

• Provide a centralized repository for proteomics data submissions
• Enable data reuse and reproducibility in proteomics research
• Develop and maintain tools for proteomics data analysis and visualization
• Support the proteomics community through standardized data formats and workflows

• Fork the desired repository
• Clone your fork locally
• Install required dependencies (see project-specific README)
• Write unit tests for new features
• Document your code using standard documentation formats
• Submit pull requests against the dev or develop branch
• All changes require peer review
• CI/CD checks must pass
• Documentation must be updated when applicable

• PRIDE Archive Website
• PRIDE Documentation
• GitHub Discussions: Join our disussions at GitHub discussions

We believe in:

• Open science and data sharing
• Collaborative development
• Clear communication
• Continuous learning

Fun fact: Our team's favorite coding fuel is a mix of coffee and Tea with a lot of fun!

1. Check a repository
2. Pick an issue or propose a new feature
3. Follow our contribution guidelines
4. Submit your pull request

All PRIDE Database projects are licensed under the Apache License 2.0 unless otherwise specified.

PRIDE is supported by EMBL-EBI, and we're grateful to our global community of contributors who help make proteomics data sharing possible.

Need help? Open an issue or contact [email protected]