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Unsupervised clustering has the same memory usage with values of min_rep that exceed the number of input sequences as with min_rep: 0. This occurs regardless of whether the Blazing Signature Filter or SciPy is used to calculate Jaccard distance, but the error message when using SciPy indicates that Snekmer is running out of memory during this calculation.
The text was updated successfully, but these errors were encountered:
Unsupervised clustering has the same memory usage with values of
min_rep
that exceed the number of input sequences as withmin_rep: 0
. This occurs regardless of whether the Blazing Signature Filter or SciPy is used to calculate Jaccard distance, but the error message when using SciPy indicates that Snekmer is running out of memory during this calculation.The text was updated successfully, but these errors were encountered: