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Adding reactions from ims837 #3

Merged
merged 5 commits into from
Mar 12, 2024
Merged

Adding reactions from ims837 #3

merged 5 commits into from
Mar 12, 2024

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JamesPino
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Adding reactions from ims837 update

…Keeping those separate until additional evidence is found to support addition.
…sucrose (compress_model.ipynb)

Updating model to not limit biomass (currently set at 2).
Adding notebook to optimize sucrose via strain design. Example reactions that it found using MCS and optknock are included in notebook.
@JamesPino JamesPino merged commit 833b013 into main Mar 12, 2024
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