Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Shree changes #18

Open
wants to merge 28 commits into
base: master
Choose a base branch
from
Open

Conversation

shreesowndarya
Copy link
Contributor

Adding in example with xtb json

  1. preprocessing
  2. building a model fro YSI prediction

Adding in necessary JSON files for YSI prediction

Updates to xtb_preprocessor.py to incorporate bond_indices

shreesowndarya and others added 23 commits January 3, 2022 10:16
2. features :  incoporates the functions for bond and atom features from 
xtb
3. preprocessor: function call to incule a json file if it is passed 
from xtb calculations.
…atures : incoporates the functions for bond and atom features from xtb 3. preprocessor: function call to incule a json file if it is passed from xtb calculations.
2. minor correction to features and xtb_preprocessing
2. Example showing the the diffrent features
3. added in tests (dont know how to check them though :/)
2. addressing all other comments
checks for the numpy array global feature and that the padding and batching operations work. Probably could have more informative features in the batching test, but this works for now
1. preprocessing
2. building a model fro YSI prediction

Adding innecessary data of json files for model building

Some updates to xtb_preprocessor to incoporate bond_indices as well.
@pstjohn
Copy link
Contributor

pstjohn commented Feb 2, 2022

Hey Shree,

Is there any way we could demo this without adding ~200 new json files to this repository? Im wondering if you could just download them from another source in the demo notebook. This package gets used in a few other places, so it might be a pain to have to download those even when we're not doing anything with xtb.

@shreesowndarya
Copy link
Contributor Author

Is it ok to have it as a zipped folder instead?

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

2 participants