add debug flags to GNU CI and fix remaining failures #989
Workflow file for this run
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| # 'main' required ci, does a distcheck (builds, tests, check install) | |
| # image created off dockerfile in repo, compile/link flags are set there | |
| name: Build libFMS test with autotools | |
| on: [push, pull_request] | |
| # cancel running jobs if theres a newer push | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| conf-flag: [ --disable-openmp, --disable-setting-flags, --with-mpi=no, --disable-r8-default] | |
| input-flag: [--with-yaml, --enable-test-input=/home/unit_tests_input] | |
| exclude: | |
| - conf-flag: --with-mpi=no | |
| input-flag: --enable-test-input=/home/unit_tests_input | |
| container: | |
| image: ghcr.io/noaa-gfdl/fms/fms-ci-rocky-gnu:13.2.0 | |
| env: | |
| TEST_VERBOSE: 1 | |
| DISTCHECK_CONFIGURE_FLAGS: "${{ matrix.conf-flag }} ${{ matrix.input-flag }} ${{ matrix.io-flag }}" | |
| SKIP_TESTS: "test_horiz_interp2.[23-24]" # TODO (couldn't reproduce outside CI) | |
| DEBUG_FLAGS: "-O0 -g -fbounds-check -ffpe-trap=invalid,zero,overflow" # debug compiler flags taken from the mkmf template | |
| steps: | |
| - name: Checkout code | |
| uses: actions/checkout@v4 | |
| - name: Prepare GNU autoconf for build | |
| run: autoreconf -if | |
| - name: Configure the build | |
| if: ${{ matrix.conf-flag != '--disable-setting-flags' }} | |
| run: ./configure ${DISTCHECK_CONFIGURE_FLAGS} FCFLAGS="$FCFLAGS $DEBUG_FLAGS" | |
| - name: Configure the build with compiler flags | |
| if: ${{ matrix.conf-flag == '--disable-setting-flags' }} | |
| run: ./configure ${DISTCHECK_CONFIGURE_FLAGS} FCFLAGS="-fdefault-real-8 -fdefault-double-8 -fcray-pointer -ffree-line-length-none -I/usr/include $FCFLAGS $DEBUG_FLAGS" || cat config.log | |
| - name: Build the library | |
| run: make distcheck | |
| if: ${{ matrix.conf-flag != '--with-mpi=no' }} | |
| - name: Build the library (without test suite for serial build) | |
| run: make | |
| if: ${{ matrix.conf-flag == '--with-mpi=no' }} |