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fix rec_nll evaluate bug #615
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@Bai-Li-NOAA or @ChristineStawitz-NOAA, can either of you review and approve this PR? |
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Jun 4, 2024
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Codecov ReportAll modified and coverable lines are covered by tests ✅
Additional details and impacted files@@ Coverage Diff @@
## main #615 +/- ##
==========================================
+ Coverage 78.54% 78.56% +0.01%
==========================================
Files 36 36
Lines 1944 1945 +1
Branches 141 141
==========================================
+ Hits 1527 1528 +1
Misses 374 374
Partials 43 43 ☔ View full report in Codecov by Sentry. |
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What is the feature?
estimate_log_devs
was not being passed from the interface into the modeltrue
by default so the recruitment nll was being evaluated regardless if the recruitment deviations were being estimated.How have you implemented the solution?
Passed the bool value from the interface to the model
Does the PR impact any other area of the project?
This fix will change the overall joint negative log-likelihood and the recruitment negative log-likelihood reported from the model
How to test this change
fims_demo.Rmd should print a value of
0
from the recruitment nll,report$rec_nll
Developer pre-PR checklist