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Update the bufr2ioda yamls #183

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Update the bufr2ioda yamls #183

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724997b
Initial commit of updated yamls. Includes several changes including s…
delippi Sep 26, 2024
b19fbfc
Commented out TunedObsError. Changed instances of U/V-Component of th…
delippi Sep 30, 2024
91b5bc7
added back transforms: scale 100 which was accidentally removed before.
delippi Oct 4, 2024
b10d41d
Merge branch 'develop' into feature/update_prepbufr2ioda_yamls
guoqing-noaa Oct 4, 2024
1c34239
revert stationElevation and height back to integers.
delippi Oct 4, 2024
ef47d61
rename lat/lon units from degree_* to degrees_*.
delippi Oct 17, 2024
079aefb
Merge branch 'develop' into feature/update_prepbufr2ioda_yamls
guoqing-noaa Oct 17, 2024
1ca44e8
Merge branch 'develop' into feature/update_prepbufr2ioda_yamls
guoqing-noaa Oct 22, 2024
237b6ad
Updates to match IODA conventions. Changed units for timeOffset to s …
delippi Oct 23, 2024
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210 changes: 123 additions & 87 deletions rrfs-test/IODA/yaml/prepbufr_adpsfc.yaml
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235 changes: 82 additions & 153 deletions rrfs-test/IODA/yaml/prepbufr_adpupa.yaml
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Original file line number Diff line number Diff line change
@@ -1,13 +1,12 @@
# (C) Copyright 2020 NOAA/NWS/NCEP/EMC
# (C) Copyright 2024 NOAA/NWS/NCEP/EMC
#
# This software is licensed under the terms of the Apache Licence Version 2.0
# which can be obtained at http://www.apache.org/licenses/LICENSE-2.0.

observations:
- obs space:
name: bufr

obsdatain: "./prepbufr"
obsdatain: "./bufr/prepbufr"

exports:
group_by_variable: prepbufrDataLvlCat
Expand All @@ -33,14 +32,17 @@ observations:
#- WDSATR # WINDSAT SCATTEROMETER WIND DATA (REPROCESSED, SAID)
#- ASCATW # ASCAT SCATTEROMETER DATA (REPROCESSED, SAID)
variables:
# MetaData
timestamp:
timeoffset:
timeOffset: "*/PRSLEVEL/DRFTINFO/HRDR"
transforms:
- scale: 3600
referenceTime: @referenceTime@
referenceTime: "2022-05-26T19:00:00Z"
timeOffset:
query: "*/PRSLEVEL/DRFTINFO/HRDR"
transforms:
- scale: 3600
longitude:
query: "*/PRSLEVEL/DRFTINFO/XDR"
latitude:
Expand All @@ -49,12 +51,11 @@ observations:
query: "*/SID"
stationElevation:
query: "*/ELV"
type: float
#type: float
prepbufrReportType:
query: "*/TYP"
dumpReportType:
query: "*/T29"

prepbufrDataLvlCat:
query: "*/PRSLEVEL/CAT"

Expand All @@ -75,7 +76,7 @@ observations:

heightOfObservation:
query: "*/PRSLEVEL/Z___INFO/Z__EVENT{1}/ZOB"
type: float
#type: float
heightOfObservationQualityMark:
query: "*/PRSLEVEL/Z___INFO/Z__EVENT{1}/ZQM"

Expand Down Expand Up @@ -124,36 +125,6 @@ observations:
transform:
- scale: 0.514444

#seaTemperature:
# query: "*/SST_INFO/SSTEVENT{1}/SST1"
#seaTemperatureQualityMarker:
# query: "*/SST_INFO/SSTEVENT{1}/SSTQM"
#seaTemperatureError:
# query: "*/SST_INFO/SSTBACKG/SSTOE"
#seaTemperatureMethod:
# query: "*/SST_INFO/MSST"
#depthBelowSeaSurface:
# query: "*/SST_INFO/DBSS_SEQ/DBSS"
# type: float
#
#presentWeather:
# query: "*/PREWXSEQ/PRWE"
#
#verticalSignificance:
# query: "*/CLOUDSEQ{1}/VSSO"
#cloudAmount:
# query: "*/CLOUDSEQ{1}/CLAM"
#heightOfBaseOfCloud:
# query: "*/CLOUDSEQ{1}/HOCB"
# type: float
#cloudCoverTotal:
# query: "*/CLOU2SEQ{1}/TOCC"
# type: float
# transforms:
# - scale: 0.01
#heightAboveSurfaceOfBaseOfLowestCloud:
# query: "*/CLOU2SEQ/HBLCS"

ioda:
backend: netcdf
obsdataout: "./ioda_adpupa.nc"
Expand Down Expand Up @@ -187,8 +158,8 @@ observations:
- name: "MetaData/timeOffset"
coordinates: "longitude latitude"
source: variables/timeOffset
longName: "Observation Time Offset from Reference Time"
units: "Seconds"
longName: "Observation Time Minus Reference Time"
units: "s"

- name: "MetaData/stationIdentification"
coordinates: "longitude latitude"
Expand All @@ -200,21 +171,21 @@ observations:
coordinates: "longitude latitude"
source: variables/longitude
longName: "Longitude"
units: "degrees_east"
units: "degree_east"
range: [0, 360]

- name: "MetaData/latitude"
coordinates: "longitude latitude"
source: variables/latitude
longName: "Latitude"
units: "degrees_north"
units: "degree_north"
range: [-90, 90]

- name: "MetaData/stationElevation"
coordinates: "longitude latitude"
source: variables/stationElevation
longName: "Height of Station"
units: "Meter"
longName: "Elevation of Station"
units: "m"

- name: "MetaData/prepbufrReportType"
coordinates: "longitude latitude"
Expand All @@ -234,22 +205,18 @@ observations:
longName: "Prepbufr Data Level Category"
units: ""

- name: "MetaData/pressure"
coordinates: "longitude latitude"
source: variables/pressure
longName: "Pressure"
units: "Pa"

- name: "MetaData/height"
coordinates: "longitude latitude"
source: variables/heightOfObservation
longName: "Height"
units: "Meter"

#- name: "MetaData/seaTemperatureMethod"
# coordinates: "longitude latitude"
# source: variables/seaTemperatureMethod
# longName: "Method of Sea Temperature Measurement"
units: "m"

- name: "MetaData/pressure"
coordinates: "longitude latitude"
source: variables/pressure
longName: "Pressure"
units: "Pa"

# ObsType
- name: "ObsType/specificHumidity"
Expand Down Expand Up @@ -287,153 +254,115 @@ observations:
coordinates: "longitude latitude"
source: variables/airTemperature
longName: "Temperature"
units: "Kelvin"
units: "K"

- name: "ObsValue/dewpointTemperature"
coordinates: "longitude latitude"
source: variables/dewpointTemperature
longName: "Dewpoint Temperature"
units: "Kelvin"
units: "K"

- name: "ObsValue/windEastward"
coordinates: "longitude latitude"
source: variables/windEastward
longName: "Eastward Wind"
units: "Meter Second-1"
units: "m s-1"

- name: "ObsValue/windNorthward"
coordinates: "longitude latitude"
source: variables/windNorthward
longName: "Northward Wind"
units: "Meter Second-1"

#- name: "ObsValue/seaTemperature"
# coordinates: "longitude latitude"
# source: variables/seaTemperature
# longName: "Sea Temperature"
# units: "Kelvin"

#- name: "ObsValue/depthBelowSeaSurface"
# coordinates: "longitude latitude"
# source: variables/depthBelowSeaSurface
# longName: "Depth Below Sea Surface"
# units: "Meter"

#- name: "ObsValue/presentWeather"
# coordinates: "longitude latitude"
# source: variables/presentWeather
# longName: "Description of Present Weather"

#- name: "ObsValue/verticalSignificance"
# coordinates: "longitude latitude"
# source: variables/verticalSignificance
# longName: "Description of Vertical Significance (Surface Observations)"

#- name: "ObsValue/cloudAmount"
# coordinates: "longitude latitude"
# source: variables/cloudAmount
# longName: "Description of Cloud Amount"

#- name: "ObsValue/heightOfBaseOfCloud"
# coordinates: "longitude latitude"
# source: variables/heightOfBaseOfCloud
# longName: "Height of Base of Cloud"
# units: "Meter"

#- name: "ObsValue/cloudCoverTotal"
# coordinates: "longitude latitude"
# source: variables/cloudCoverTotal
# longName: "Total Cloud Coverage"
# units: "1"

#- name: "ObsValue/heightAboveSurfaceOfBaseOfLowestCloud"
# coordinates: "longitude latitude"
# source: variables/heightAboveSurfaceOfBaseOfLowestCloud
# longName: "Height above Surface of Base of Lowest Cloud Seen"

units: "m s-1"

# Quality Marker
- name: "QualityMarker/pressure"
coordinates: "longitude latitude"
source: variables/pressureQualityMarker
longName: "Pressure Quality Marker"

- name: "QualityMarker/height"
coordinates: "longitude latitude"
source: variables/heightOfObservationQualityMark
longName: "Height Quality Marker"

- name: "QualityMarker/specificHumidity"
coordinates: "longitude latitude"
source: variables/specificHumidityQualityMarker
longName: "Specific Humidity Quality Marker"

- name: "QualityMarker/airTemperature"
coordinates: "longitude latitude"
source: variables/airTemperatureQualityMarker
longName: "Temperature Quality Marker"

- name: "QualityMarker/wind"

- name: "QualityMarker/windEastward"
coordinates: "longitude latitude"
source: variables/windQualityMarker
longName: "windEastward Quality Marker"

- name: "QualityMarker/windNorthward"
coordinates: "longitude latitude"
source: variables/windQualityMarker
longName: "U, V-Component of Wind Quality Marker"

#- name: "QualityMarker/seaTemperature"
# coordinates: "longitude latitude"
# source: variables/seaTemperatureQualityMarker
# longName: "Sea Temperature Quality Marker"

longName: "windNorthward Quality Marker"

# ObsError
- name: "ObsError/pressure"
coordinates: "longitude latitude"
source: variables/pressureError
longName: "Pressure Observation Error"
units: "Pa"

- name: "ObsError/relativeHumidity"
coordinates: "longitude latitude"
source: variables/relativeHumidityError
longName: "Relative Humidity Error"
units: "1"

- name: "ObsError/airTemperature"
coordinates: "longitude latitude"
source: variables/airTemperatureError
longName: "Temperature Error"
units: "Kelvin"
- name: "ObsError/wind"
units: "K"

- name: "ObsError/windEastward"
coordinates: "longitude latitude"
source: variables/windError
longName: "East and Northward wind error"
units: "Meter Second-1"

#- name: "ObsError/seaTemperature"
# coordinates: "longitude latitude"
# source: variables/seaTemperatureError
# longName: "Sea Temperature Observation Error"
# units: "Kelvin"

# Tuned ObsError
- name: "TunedObsError/pressure"
coordinates: "longitude latitude"
source: variables/pressureTunedError
longName: "Analysis-Tuned Pressure Observation Error"
units: "Pa"

- name: "TunedObsError/relativeHumidity"
coordinates: "longitude latitude"
source: variables/relativeHumidityTunedError
longName: "Analysis-Tuned Relative Humidity Error"
units: "1"

- name: "TunedObsError/airTemperature"
coordinates: "longitude latitude"
source: variables/airTemperatureTunedError
longName: "Analysis-Tuned Temperature Error"
units: "Kelvin"

- name: "TunedObsError/wind"
longName: "Eastward wind error"
units: "m s-1"

- name: "ObsError/windNorthward"
coordinates: "longitude latitude"
source: variables/windTunedError
longName: "Analysis-Tuned East and Northward wind error"
units: "Meter Second-1"
source: variables/windError
longName: "Northward wind error"
units: "m s-1"

# # Tuned ObsError
# - name: "TunedObsError/pressure"
# coordinates: "longitude latitude"
# source: variables/pressureTunedError
# longName: "Analysis-Tuned Pressure Observation Error"
# units: "Pa"
#
# - name: "TunedObsError/relativeHumidity"
# coordinates: "longitude latitude"
# source: variables/relativeHumidityTunedError
# longName: "Analysis-Tuned Relative Humidity Error"
# units: "1"
#
# - name: "TunedObsError/airTemperature"
# coordinates: "longitude latitude"
# source: variables/airTemperatureTunedError
# longName: "Analysis-Tuned Temperature Error"
# units: "K"
#
# - name: "TunedObsError/windEastward"
# coordinates: "longitude latitude"
# source: variables/windTunedError
# longName: "Analysis-Tuned Eastward wind error"
# units: "m s-1"
#
# - name: "TunedObsError/windNorthward"
# coordinates: "longitude latitude"
# source: variables/windTunedError
# longName: "Analysis-Tuned Northward wind error"
# units: "m s-1"
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