Skip to content

Issues: MetabolicAtlas/standard-GEM

Focus of the next release
#23 opened Sep 8, 2020 by mihai-sysbio
Open
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

13 Open 9 Closed
13 Open 9 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

GSMM as an alternative to GEM
#39 opened Oct 26, 2023 by mihai-sysbio
Clarify naming convention for model files
#38 opened Oct 26, 2023 by mihai-sysbio
Support for repositories with multiple GEMs (f. ex. strain collections) enhancement New feature or request
#37 opened Nov 2, 2022 by famosab
4 tasks done
1
Automated tests via github actions for repositories generated from this template
#36 opened Oct 28, 2022 by famosab
4 tasks done
3
template for gh pages landing page in /docs on master
#31 opened Jul 28, 2021 by mihai-sysbio
Revise templates in .github
#29 opened Oct 29, 2020 by mihai-sysbio
@mihai-sysbio
Encourage the use of dedicated fields rather than semantic overloading
#27 opened Sep 15, 2020 by draeger
12
Focus of the next release
#23 opened Sep 8, 2020 by mihai-sysbio
Documentation of model development workflow workflow for curating GEM-type repos
#20 opened Aug 27, 2020 by sulheim
16
External standard subsystem for each reaction to make it comparable from different GEMs discussion Discussion for the optimal solutions
#19 opened Aug 24, 2020 by hongzhonglu
10
Encourage the use of COMBINE archives as exchange format for the model and its execution modelFormat Requests for model file formats
#18 opened Aug 13, 2020 by draeger
6
Consider using more powerful templating, e.g., cookiecutter
#11 opened Aug 13, 2020 by Midnighter
10
manage dependencies dependencies dependency issues relevant to GEM-type repos discussion Discussion for the optimal solutions
#10 opened Jul 3, 2020 by mihai-sysbio
ProTip! Type g p on any issue or pull request to go back to the pull request listing page.