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Sync dev with latest #76

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enicolasgomez and others added 2 commits March 7, 2024 12:29
* CFOS-91 fix: Reset atlas position only on atlas changes

* Fixed sobel paramters and transformed to 2bits with anti-alliasing

* Refactored slice change through a helper function

* CFOS-97 added tests

* CFOS-88 feat: WIP - Change opacity with intensity

* CFOS-88 fix: Fix activity map transparency

* CFOS-88 feat: Validate correct loading of data

* CFOS-88 feat: Disable atlas slider

* CFOS-88 feat: Reintroduce global intensity slider

* CFOS-88 feat: Connect global intensity slider

* enabled headless mode

* adding test to pipeline

* adding test to pipeline - fixed identation

* adding test to pipeline - fixed stage

* Update README.md

* Update codefresh-dev.yaml

changing build and deployment tag, case sensitive issue to pull images from public registry

* CFOS-97 missing dickerfile

* CFOS-97 addiing package-lock for codefresh purposes

* CFOS-97 removed unused devependencies

* CFOS-97 regenerating package files

* CFOS-97 test command

* CFOS-97 added page.url log + changed page instance name for control panel test

* CFOS-97 added sleep before tests

* CFOS-97 skipping intensity tests

* CFOS-97 fixed codefresh volume command

* CFOS-97 changed screenshot to be page onstead of canvas

* CFOS-97 process.env.url

* packahe-lock.json addition

* url changed to DOMAIN variable

* changed way of checking download

* fix snapshot

* updated image considering fix

* Added back ActivityMap

* CFOS-103 feat: Update slider logic

* CFOS-102 chore: Remove unused webpack configs

* CFOS-102 chore: Remove unused package-lock.json

* CFOS-102 feat: WIP - Add probe widget

* Removed commented out lines

* changed parameters to use dev bucket

* Changed env storage location

* CFOS-102 feat: WIP - Connect probe widget

* CFOS-102 feat: Update frame deserialization

* create CustomTooltip.js

* Implement UI changes as per design changes

* CFOS-102 feat: WIP - Add react component instead of dom manipulation

* CFOS-102 refactor: Refactor out viewerProbe component

* CFOS-102 feat: Update tooltip content

* CFOS-102 feat: Add LUT prototype

* CFOS-102 feat: Update tooltip open logic

* CFOS-102 feat: WIP - Add location panel

* CFOS-102 feat: WIP - Add activity map intensity information

* CFOS-102 feat: Add activity map intensity information

* CFOS-102 feat: Merge with develop

* fix map position

* CFOS-92 fix: Resize viewer according to parent dimensions

* adjust the tooltip position on mouse move

* disable the max width for MuiTooltip

* make the bk of Map details transparent to not affect other elements styling

* CFOS-102 feat: Update location panel visible logic

* CFOS-102 feat: Update camera range

* CFOS-102 feat: Include only visible stacks on location panel

* CFOS-102 fix: Update wheel event handling to work with tooltips

* CFOS-96 fix: Get the new slice index within range

* CFOS-102 feat: Update serialization/deserialization

* CFOS-102 fix: Ignore on move ticks with errors

* CFOS-102 fix: Update activity map index after added to the scene

* CFOS-102 fix: Update pixelData capture for activity maps

* CFOS-102 feat: Update gradient strategy

* CFOS-102 feat: Reactive controls

* CFOS-102 feat: Remove renderer antialias

* CFOS-102 feat: Update controls

* CFOS-102 feat: Add wireframe object to the scene

* CFOS-102 fix: Fix normalized min gradient calculation

* CFOS-127 feat: Remove slice interpolation

* chore: Add mock_download_as_stream

* CFOS-121: placeholder for details component

* CFOS-99: deployment with nginx and letsencrypt

* CFOS-99: deployment fix

* fixing certificate

* add some theme variables

* add alert component

* Added tests into pipeline + updated snapshots

* add tabs component

* handle alert click

* handle tabs change

* CFOS-102 fix: Fix typo

* CFOS-71 Add drag-drop logic to reorder layer list

* CFOS-71 Add planes reordering

* CFOS-71 Fix reorder for the dragndrop

* CFOS-71 Add some comments about the viewer order

* CFOS-71 Remove "comming soon" message

* CFOS-71 Enable visualy dragNdrop button

* CFOS-71 Add different message for Atlas dNd button

* #39 details tab component for metadata visualization

* fix alert background

* #69 Experiments sharing the same atlas tab

* fix the tabs position when scrolling

* CFOS-132: fixing ingestion (not computing activity maps before) and skipping wireframe generation

* #69 treeItem styling, details modal

* CustomTextField maintaining state

* 105 and 107

* leave the ingestion when done

* CFOS-134 Add first atlas reorder support

* CFOS-134 Add transparency on base atlas

* CFOS-134 Remove comments and unused imports

* CFOS-119 Remove hidden file during ingestion

* #69 treeItem styling, details modal

* #135 add HierarchyActivityMaps

* #135 point main.py index file to the correct one

* CFOS-123 worked on the slider tests

* #40 #133 convert the data to a treeview + implement the cosmetics fixes for both images and experiments

* refactor treeItem code to use a common component

* fix tree item bug

* fix tree item bug

* CFOS-137 feat: Update ingestion step to include metadata.json

* CFOS-137 feat: Update store to include metadata

* CFOS-138 fix: Properly connect reset slider intensity

* CFOS-126 feat: Add and connect min value inclusion toggle icon button

* #49 view only experiments that's shares the same atlas + add arrow click action to vew selected experiment

* #49 view atlas id

* view Experience Details

* view empty placeholder

* CFOS-123 completing sliders tests + snapshot updates

* CFOS-137 feat: Update ingestion step to include metadata.json

* CFOS-137 feat: Update store to include metadata

* CFOS-138 fix: Properly connect reset slider intensity

* CFOS-126 feat: Add and connect min value inclusion toggle icon button

* CFOS-123 extra selector

* fix concatenating nested experiments issue

* CFOS-106 feat: Connect max picker

* use active alas directly from the redux store + update the experiment sharing same atlas condition

* CFOS-106 chore: Remove deprecated methods

* CFOS-106 chore: Use destructuration on hexToNormalizedRGBA

* fix details spacing + add check for hierarchy prop

* CFOS-134 Fix regression about transparent background

* CFOS-105 Disable drag and drop if layer is locked

* CFOS-105 Disable all icons when a layer is locked

* CFOS-126 feat: Connect input text

* CFOS-130 chore: Update build scripts and configuration files

* CFOS-130 chore: Update dockerfile

* fixing deployment

* fixing deployment 2

* CFOS-126 feat: Update slider input field logic

* Update cfos.yaml

* CFOS-130 chore: Update codefresh configuration

* CFOS-130 chore: Update codefresh configuration

* CFOS-130 chore: Fix typo in .env file

* fixing table styling

* fixing table styling 2

* refactor images tab code to view the hierarchy levels properly

* split logic code into a separated file

* fix crashing bug due to duplicated parent nodes

* fix crashing bug

* refactor DoDataPreprocessing function

* Feature/cfos 40 refactor images (#74)

* fix tree id's

* view experiments with no hierarchy as a separated node

* put the others experiments at the end of the tree

* Update README.md

updating the ingestion for the wireframe nomenclature

* Update README.md

changing bucket in the readme

* added wipe bucket functionality (#54)

* cfos version update

---------

Co-authored-by: afonso <[email protected]>
Co-authored-by: Nico Gomez <[email protected]>
Co-authored-by: Simao Bolota <[email protected]>
Co-authored-by: salam dalloul <[email protected]>
Co-authored-by: Salam Dalloul <[email protected]>
Co-authored-by: aranega <[email protected]>
Co-authored-by: Zoran Sinnema <[email protected]>
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3 participants