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Jet Substructure #13

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Commits on Mar 22, 2022

  1. add VariableR plugin

    @jackaraz
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  2. add event based execution to Cluster.h

    @jackaraz
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  3. add protection against same JetID

    @jackaraz
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  4. add proper exception handlers

    @jackaraz
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  5. bugfix in setup_writer.py

    @jackaraz
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  6. bugfix in setup_writer.py

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  7. bugfix in setup_writer.py

    @jackaraz
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  8. include VariableR algorithm for SFS

    @jackaraz
    jackaraz committed Mar 22, 2022
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  9. failsafe for variableR

    @jackaraz
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  10. extend docstring

    @jackaraz
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  11. add pruner

    @jackaraz
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  12. move clustering function to private

    @jackaraz
    jackaraz committed Mar 22, 2022
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  13. add vector execution

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Commits on Mar 23, 2022

  1. improve coding style and documentation

    @jackaraz
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  2. add extra layer of protection

    @jackaraz
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  3. protection for delphes 

    - remove track generator from delphes based analyses in JetClusterer.cpp
    @jackaraz
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Commits on Mar 24, 2022

  1. add filtering functionality for single jet execution to Cluster.h

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  2. optimize the codeflow

    @jackaraz
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  3. bugfix in Nsubjettiness.h

    @jackaraz
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  4. rename accessors for readability

    @jackaraz
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  5. optimize codeflow in JetClusterer.h

    @jackaraz
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  6. add Filter.h

    @jackaraz
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  7. further optimization for SoftDrop.h

    @jackaraz
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  8. fix the function names

    @jackaraz
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Commits on Mar 25, 2022

  1. add ability to cluster. this will allow adding further features

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  2. optimize codeflow: ClusterBase.h

    @jackaraz
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  3. add EnergyCorrelator.h

    @jackaraz
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  4. move VariableR parameters into the class

    @jackaraz
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  5. move Nsubjettiness methods into the class

    @jackaraz
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  6. bugfix in ClusterBase.h

    @jackaraz
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Commits on Mar 26, 2022

  1. enable zsh support

    @jackaraz
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  2. codeflow optimization for memory allocation 

     - also code style improved
    @jackaraz
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  3. further memory allocation optimization

    @jackaraz
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Commits on Mar 27, 2022

  1. further cutflow optimization

    @jackaraz
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  2. introduce shorthand for widely used reco obj

    @jackaraz
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  3. rename shortcuts

    @jackaraz
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  4. bugfix

    @jackaraz
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Commits on Mar 28, 2022

  1. add shorthand for tracks

    @jackaraz
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Commits on Mar 30, 2022

  1. create a failsafe for jet accessors

    @jackaraz
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  2. optimise RecEventFormat.h

    @jackaraz
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  3. remove old jets_ vector

    @jackaraz
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  4. update DelphesTreeReader.cpp

    @jackaraz
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Commits on Apr 1, 2022

  1. update DelphesTreeReader.cpp 

    - Delphes test can not be compiled at the moment. Needs fixing.
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Commits on Apr 2, 2022

  1. add checkup for fjcontrib

    @jackaraz
    jackaraz committed Apr 2, 2022
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  2. modify library structure

    @jackaraz
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  3. create shared library for substructure module

    @jackaraz
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  4. bugfix in execution without fastjet

    @jackaraz
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  5. slight modification in coding style of main.py

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  6. add substructure library to normal mode workflow

    @jackaraz
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  7. bugfix in RecJetFormat.h

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Commits on Apr 3, 2022

  1. improve the code structure

    @jackaraz
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  2. move fastjet into shared library

    @jackaraz
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  3. move filter into the shared library

    @jackaraz
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  4. add Pruner.cpp

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Commits on Apr 4, 2022

  1. update the structure of the class: ClusterBase.h

    @jackaraz
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Commits on Apr 5, 2022

  1. improve Nsubjettiness.h

    @jackaraz
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  2. add HEPTopTagger to SampleAnalyzer backend

    @jackaraz
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  3. integration of HTT for compilation libraries

    @jackaraz
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  4. HTT installation and detection interfaces

    @jackaraz
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  5. add fastjet flag

    @jackaraz
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  6. add HTT to AnalyzerBase.h

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Commits on Apr 6, 2022

  1. move Recluster.hh to the source file

    @jackaraz
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  2. update install_heptoptagger.py

    @jackaraz
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  3. update install_heptoptagger.py

    @jackaraz
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  4. simplify Filter.h

    @jackaraz
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  5. add empty jet (thanks to @econte-cms)

    @jackaraz
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  6. move softdrop to source

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Commits on Apr 7, 2022

  1. add examples for substructure module

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  2. add table for available normal mode jet_algo definitions

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  3. add installation instructions

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Commits on Apr 10, 2022

  1. fix syntax in virtual functions

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Commits on Apr 11, 2022

  1. fix memory leaks and doc 

    * deleting variables that are created on heap
* fix destructors
* fix README.md
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Commits on Apr 12, 2022

  1. remove pseudojet dependency from JetClusterer.cpp

    @jackaraz
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  2. protection against delphes

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Commits on Apr 13, 2022

  1. implement exclusive_subjets accessor to RecJetFormat.h

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Commits on Apr 19, 2022

  1. bugfix in malloc for Pruner.cpp and Filter.cpp

    @jackaraz
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  2. bugfix in malloc for SoftDrop.cpp

    @jackaraz
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  3. add failsafe for exclusive_subjets

    @jackaraz
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  4. remove unnecessary class declarations in ClusterBase.h

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Commits on Apr 20, 2022

  1. fix library name

    @jackaraz
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  2. bugfix in HTT.h and HTT.cpp

    @jackaraz
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  3. add test module for HTT

    @jackaraz
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  4. check compiler version

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  5. raise proper error with necessary information

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Commits on Apr 21, 2022

  1. optimise codeflow

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  2. optimise codeflow: HTT.h

    @jackaraz
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  3. update FastJet and fjcontrib 

    * add CXX11 and fPIC flags
* enable all plugins
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  4. modify behaviour incase fjcontrib is not available

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  5. import fjcontrib based interface if fjcontrib is available

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  6. bugfix: fjconfig control requires new flag

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Commits on Apr 22, 2022

  1. move variableR headers to source file

    @jackaraz
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  2. compile fjcontrib as position independent code

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Commits on Apr 25, 2022

  1. cleaning setup_write.py

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  2. Update ma5

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  3. cleaning cmd_submit.py

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Commits on Apr 26, 2022

  1. missing initialisation in the reset function for the MCParticleFormat… 

    …Class
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  2. Polishing JetClusterer.h

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  3. Merge branch 'substructure' into sharedlib

    @jackaraz
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Commits on Apr 27, 2022

  1. removing useless comments in install_fastjet.py

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  2. removing useless comments in install_fastjetcontrib.py

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Commits on May 5, 2022

  1. polishing the heptoptagger installation routines + downgrading clang … 

    …requirements
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  2. polishing install_manager.py

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  3. polishing detect_fastjet.py

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  4. polishing detect_heptoptagger.py

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Commits on May 17, 2022

  1. polishing RecJetFormat.cpp

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  2. Polishing HEPTopTagger

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  3. Removing a useless line in ClusterBase.h

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  4. Polishing the substructure readme

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  5. Fixing the substructure readme (markdown)

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  6. Fixing the substructure readme (markdown)

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Commits on May 18, 2022

  1. Merge pull request #63 from MadAnalysis/sharedlib 

    Substructure to Shared Library
    @BFuks
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Commits on May 24, 2022

  1. convert bits to LaTeX

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  2. Merge branch 'main' into substructure

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Commits on May 28, 2022

  1. add changelog for v2.0

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Commits on May 30, 2022

  1. Merge branch 'main' into substructure

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  2. Merge branch 'main' into substructure

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Commits on Jun 1, 2022

  1. Merge branch 'main' into substructure

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Commits on Jun 6, 2022

  1. improve code efficiency

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  2. deprecate old detector simulator

    @jackaraz
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  3. change ancestor as RecJetFormat

    @jackaraz
    jackaraz committed Jun 6, 2022
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  4. add reconstruction method

    @jackaraz
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  5. set default reco mode to hadron-based

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  6. Merge branch 'main' into substructure

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  7. Merge branch 'substructure' into tau_tagging

    @jackaraz
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  8. merge updates

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  9. initialize tagger base

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Commits on Jun 7, 2022

  1. main routines for tagger base

    @jackaraz
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  2. add tagger base

    @jackaraz
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Commits on Jun 8, 2022

  1. construct main tagger structure (not complete)

    @jackaraz
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  2. improve docstring

    @jackaraz
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Commits on Jun 9, 2022

  1. complete tagger module

    @jackaraz
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  2. add tagger loader

    @jackaraz
    jackaraz committed Jun 9, 2022
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  3. adapt python interface

    @jackaraz
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  4. adap user-interface

    @jackaraz
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  5. integrate new tagger to JetClusterer

    @jackaraz
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  6. remove null smearer. its not needed

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  7. rule out old tagger interface

    @jackaraz
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  8. bugfix in tagging interface

    @jackaraz
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  9. move sfs banner to JetClusterer.h

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  10. full integration of SFSTaggerBase

    @jackaraz
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  11. move SFS header file inclusion from analysis to analysisList.h

    @jackaraz
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  12. update changelog-v2.0.md

    @jackaraz
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  13. bump version minor

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  14. use functions to set parameters

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Commits on Jun 22, 2022

  1. change vector definitions to typefef

    @jackaraz
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  2. add loose, mid, tight tagging options to the jet class

    @jackaraz
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  3. adapt tagger to have loose, mid, tight taggers

    @jackaraz
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  4. butfix in hadron based tau tagging

    @jackaraz
    jackaraz committed Jun 22, 2022
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  5. adapt packages to the new tagger

    @jackaraz
    jackaraz committed Jun 22, 2022
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  6. adapt SFS tagging interface

    @jackaraz
    jackaraz committed Jun 22, 2022
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Commits on Jun 23, 2022

  1. bugfix in tagger structure

    @jackaraz
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  2. Merge branch 'main' into substructure

    @jackaraz
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  3. Merge branch 'substructure' into tau_tagging

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  4. Merge branch 'tau_tagging' into multitag

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  5. merge "fix_random" in "multitag"

    @jackaraz
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  6. bugfix in btag efficiencies

    @jackaraz
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  7. Merge branch 'main' into substructure

    @jackaraz
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  8. Merge branch 'substructure' into tau_tagging

    @jackaraz
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  9. fix tagger to match previous tagger

    @jackaraz
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  10. expand docstring

    @jackaraz
    jackaraz committed Jun 23, 2022
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  11. adapt jet identification algo

    @jackaraz
    jackaraz committed Jun 23, 2022
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  12. add switch to enable ctagging

    @jackaraz
    jackaraz committed Jun 23, 2022
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  13. code efficiency booleans are moved to SFSTaggerBase

    @jackaraz
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  14. bugfix in tagger names

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  15. move efficiency booleans to protected

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Commits on Jun 24, 2022

  1. bugfix for backwards compatibility

    @jackaraz
    jackaraz committed Jun 24, 2022
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  2. bugfix in code efficiency booleans

    @jackaraz
    jackaraz committed Jun 24, 2022
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  3. expand the printing functionality

    @jackaraz
    jackaraz committed Jun 24, 2022
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  4. Merge remote-tracking branch 'remotes/origin/tau_tagging' into multitag

    @jackaraz
    jackaraz committed Jun 24, 2022
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  5. update changelog

    @jackaraz
    jackaraz committed Jun 24, 2022
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  6. expand docstring 

    * The numeric difference between multitag and main branch is visible when ExclusiveId_ = false
    @jackaraz
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  7. fix the numeric difference in inclusive mode between main branch

    @jackaraz
    jackaraz committed Jun 24, 2022
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  8. clean the heap in JetClusterer.h

    @jackaraz
    jackaraz committed Jun 24, 2022
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  9. remove unnecessary headers

    @jackaraz
    jackaraz committed Jun 24, 2022
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  10. turn off verbosity of the tracker

    @jackaraz
    jackaraz committed Jun 24, 2022
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  11. Merge pull request #97 from MadAnalysis/multitag 

    Multilevel object tagging
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Commits on Jun 25, 2022

  1. extend the documentation

    @jackaraz
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  2. remove old tagger

    @jackaraz
    jackaraz committed Jun 25, 2022
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  3. update destructor

    @jackaraz
    jackaraz committed Jun 25, 2022
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  4. clean the header file

    @jackaraz
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  5. limit the scope of the namespace

    @jackaraz
    jackaraz committed Jun 25, 2022
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  6. extend jet definitions

    @jackaraz
    jackaraz committed Jun 25, 2022
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  7. bugfix in heap allocation for Filter

    @jackaraz
    jackaraz committed Jun 25, 2022
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  8. bugfix in pointer initializer

    @jackaraz
    jackaraz committed Jun 25, 2022
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  9. add interface test for jet substructure

    @jackaraz
    jackaraz committed Jun 25, 2022
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  10. update HTT test

    @jackaraz
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  11. update changelog-v2.0.md

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Commits on Jul 4, 2022

  1. polishing the language

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Commits on Jul 5, 2022

  1. - Polishing error and warning messages all over the place. 

     - Fixing a compilation bugs with the delphes interface and the new b-tagging.
 - Adding the ‘med’ keyword for medium b-jets.
 - Updating the way to enable tau tagging.
 - Issues with the various taggers in SFSTaggerBase that could yield inconsistencies.
 - Printout in RecJetFormat (all tags printed now).
 - MET calculation to discuss in ClusterAlgoFastjet.cpp
    @BFuks
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Commits on Jul 18, 2022

  1. revert _isTauTaggingEffOn definition

    @jackaraz
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  2. update changelog-v2.0.md

    @jackaraz
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  3. protection against prereleases

    @jackaraz
    jackaraz committed Jul 18, 2022
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  4. update changelog-v2.0.md

    @jackaraz
    jackaraz committed Jul 18, 2022
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  5. update README.md

    @jackaraz
    jackaraz committed Jul 18, 2022
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  6. remove unused integer declerations

    @jackaraz
    jackaraz committed Jul 18, 2022
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  7. Merge pull request #86 from MadAnalysis/tau_tagging 

    Tagging remastered
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  8. Merge branch 'main' into substructure

    @jackaraz
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  9. update makedoc

    @jackaraz
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  10. bump version minor

    @jackaraz
    jackaraz committed Jul 18, 2022
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  11. major bugfix for the initial compilation

    @jackaraz
    jackaraz committed Jul 18, 2022
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  12. bump version minor

    @jackaraz
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  13. bugfix in SFSTaggerBase.cpp

    @jackaraz
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  14. bump version minor

    @jackaraz
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  15. Merge branch 'main' into substructure

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Commits on Sep 29, 2022

  1. move the implementation of fatjets and genjets into the jetcollection

    @jackaraz
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  2. update changelog-v2.0.md

    @jackaraz
    jackaraz committed Sep 29, 2022
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  3. update version

    @jackaraz
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  4. bugfix for jet collection

    @jackaraz
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  5. update changelog-v2.0.md

    @jackaraz
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  6. update main_normal.tex

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Commits on Oct 3, 2022

  1. simplify the print structure

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Commits on Jan 6, 2023

  1. Merge branch 'substructure' into delphes_integration

    @BFuks
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  2. Fixing language

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  3. Merge branch 'delphes_integration' of https://github.com/MadAnalysis/… 

    …madanalysis5 into delphes_integration
    @BFuks
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  4. Merge pull request #135 from MadAnalysis/delphes_integration 

    Merging `fatjets` and `genjets` into `jetcollection`
    @BFuks
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Commits on Jan 11, 2023

  1. Compiler options for the LHCO reader

    @BFuks
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Commits on Jan 12, 2023

  1. separate asimov based stat model for SL

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  2. Revert "separate asimov based stat model for SL" 

    This reverts commit 3dad67c.
    @jackaraz
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  3. update changelog-v2.0.md

    @jackaraz
    jackaraz committed Jan 12, 2023
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  4. bump the version minor

    @jackaraz
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  5. Merge pull request #167 from MadAnalysis/LHCO_issue 

    Compiler options for the LHCO reader
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Commits on Mar 20, 2023

  1. remove unnecessary reinitialisation

    @jackaraz
    jackaraz committed Mar 20, 2023
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  2. update gitignore

    @jackaraz
    jackaraz committed Mar 20, 2023
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  3. extend gitignore

    @jackaraz
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Commits on Mar 21, 2023

  1. Merge branch 'main' into substructure

    @jackaraz
    jackaraz committed Mar 21, 2023
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  2. bump the version

    @jackaraz
    jackaraz committed Mar 21, 2023
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  3. improve executable

    @jackaraz
    jackaraz committed Mar 21, 2023
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  4. extend gitignore

    @jackaraz
    jackaraz committed Mar 21, 2023
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  5. update gitignore

    @jackaraz
    jackaraz committed Mar 21, 2023
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  6. modify the banner

    @jackaraz
    jackaraz committed Mar 21, 2023
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  7. update deletion

    @jackaraz
    jackaraz committed Mar 21, 2023
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  8. update gitignore

    @jackaraz
    jackaraz committed Mar 21, 2023
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Commits on Apr 21, 2023

  1. bugfix for issue #190

    @jackaraz
    jackaraz committed Apr 21, 2023
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Commits on May 4, 2023

  1. extend the boost class accessors

    @jackaraz
    jackaraz committed May 4, 2023
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  2. add new initialisation

    @jackaraz
    jackaraz committed May 4, 2023
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Commits on May 31, 2023

  1. Merge branch 'main' into substructure

    @jackaraz
    jackaraz committed May 31, 2023
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  2. fix linking issues

    @jackaraz
    jackaraz committed May 31, 2023
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  3. bump version

    @jackaraz
    jackaraz committed May 31, 2023
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Commits on Jun 6, 2023

  1. convert binary taco file into csv file

    @jackaraz
    jackaraz committed Jun 6, 2023
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Commits on Jul 19, 2023

  1. add fastjet flags for delphes

    @jackaraz
    jackaraz committed Jul 19, 2023
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  2. update changelog

    @jackaraz
    jackaraz committed Jul 19, 2023
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  3. real fix of the bug

    @BFuks
    BFuks committed Jul 19, 2023
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Commits on Jul 21, 2023

  1. set fastjet flag by default

    @jackaraz
    jackaraz committed Jul 21, 2023
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  2. fix the wrong placement

    @jackaraz
    jackaraz committed Jul 21, 2023
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  3. add fastjet flag for the execution

    @jackaraz
    jackaraz committed Jul 21, 2023
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  4. add protection for recjetformat

    @jackaraz
    jackaraz committed Jul 21, 2023
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  5. Merge pull request #208 from MadAnalysis/delphes_bugfix 

    Bugfix for Delphes in Jet-Substructure module
    @jackaraz
    jackaraz authored Jul 21, 2023
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Commits on Sep 13, 2023

  1. Merge branch 'main' into substructure

    @jackaraz
    jackaraz authored Sep 13, 2023
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Commits on Jul 1, 2024

  1. Fixing some bug in configuration.cpp (thanks M. Goodsell)

    @BFuks
    BFuks committed Jul 1, 2024
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Commits on Sep 23, 2024

  1. Fixing CSH setup script issue (#262)

    @BFuks
    BFuks committed Sep 23, 2024
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