Estimating the relative importance of imported malaria on local transmission in a near elimination setting: a case study from Bhutan using Hawkes Processes

Here is the code and data to reproduce the Hawkes Process analyses for this paper. To recreate the analysis the code in the code directory needs to be run in order.

You will need to install the epihawkes package:

install_packages("devtools")
library(devtools)
install_github("mrc-ide/epihawkes")