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Add additional dolfyn functionality #102
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Add additional dolfyn functionality #102
Commits on Mar 1, 2023
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Commits on Mar 3, 2023
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-fillgaps_depth and val_exceeds_thresh added to clean folder -formatting changes for fillgaps_time for consistency -remove numpy from nan_beyond_surface to fix error -notice that fillgaps_time and fillgaps_depth do the same thing, need to change to interpolate over just time/depth respectively
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Commits on Mar 21, 2023
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Update fillgaps_time and fillgaps_depth
-update these functions to interpolate over time and depth respectively -using fillmissing function in matlab now to specify an interpolation dimension -include maxgap option for both above functions -update comments for above functions
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Commits on Mar 27, 2023
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Add minimalistic worksheet to use new functions
New worksheet to demo val_exceeds_thresh and fill_gaps_time functions. Calls the same functions/uses same file for testing as python tests for these functions.
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Commits on Apr 17, 2023
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-fillgaps_time now checks var's type a little, and also uses correct error syntax -Note: MATLAB's fillmissing function does not have a default option for MaxGap, so if statement is still used for MaxGap argument
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-update fillgaps_depth function to cover discussed changes. now checking if var is from dolfyn structure, using better syntax for throwing errors -Note: fillmissing function doesn't offer default value for MaxGap in documentation, if statement needed to call correct function from fillgaps_depth
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Commits on Apr 18, 2023
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Update val_exceeds_thresh error syntax
-val_exceeds_thresh now checks types and throws an error if structure passed to function is not from dolfyn
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Commits on May 2, 2023
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Add proper Test file for functions
Add tests/Dolfyn_Test_Clean.m to mimic test_clean.py from python version of MHKiT. Currently compares cleaned data to itself in order to pass tests. Next step: Move cleaned data files into repo to compare with tests here.
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Remove test_clean_adcp_example.mlx
Since actual test file added, test_clean_adcp_example.mlx not needed
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Update test clean with tests for future clean functions
Dolfyn_Test_Clean.m updated to have functions for future tests. Dolfyn_Test_Clean.m now has all same tests as test_clean.py Commented out sections for "TODO" component/future clean functions to be added
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Commits on May 3, 2023
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Add clean data in test_data subdirectory
move required cleaned data from python version to test_data folder start using cleaned data to compare in the tests (instead of comparing to self)
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Commits on May 11, 2023
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Commits on May 30, 2023
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Fix x* vs x_star fieldname from read_netcdf.m
There was a bug in read_netcd.m where it wasn't reading from the fixed field x_star, and was trying to read the nonexistant x* field.
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Commits on Jun 14, 2023
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Add find_surface function, not quite finished still has a few errors from translating from python.
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Commits on Jun 15, 2023
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Update comments with TODO notes
Cleaned up these files with additional comments and clarifications on items.
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