Version 2.0.6600

Released on November 26, 2024

Download	Description
jbr-2.0.6600.zip	Windows archive (includes bundled 64-bit Java Runtime)
jbr-2.0.6600.dmg	Mac M1+ installer (includes bundled 64-bit Java Runtime)
jbr-2.0.6600.tar.gz	Linux archive (includes bundled 64-bit Java Runtime)
jbr-2.0.6600.jar	Java archive file

Please download jar file to launch JBR Genome Browser on Intel-based Mac computer.

• BAM/SAM/CRAM files support
• Enhanced Bisulfite-Sequence DNA methylation BAM files visualization
• Enhanced actions history support including tracks modifications, navigations, etc.
• Select tracks by name or wildcard
• Detailed information of track data on mouse cursor hover
• Multiple panels support
• GTF file support
• SPAN 2.0 model support
• Enhanced memory management and optimizations due to Amazon-Corrette JDK 21 runtime
• Apple-silicon aarch64 support (M1+ CPU)

1.0.5641

Version 1.0.5641

Released on March 13, 2023

Download	Description
jbr-1.0.5641.zip	Windows archive (includes bundled 64-bit Java Runtime)
jbr-1.0.5641.dmg	Mac installer (includes bundled 64-bit Java Runtime)
jbr-1.0.5641.tar.gz	Linux archive (includes bundled 64-bit Java Runtime)
jbr-1.0.5641.jar	Java archive file

• Create BigWig arithmetics track within the genome browser: sum, average, etc.
• Updated Docker image
• Bugfixes

v1.0.5577

Version 1.0.5577

Released on October 13, 2022

Download	Description
jbr-1.0.5577.zip	Windows archive (includes bundled 64-bit Java Runtime)
jbr-1.0.5577.dmg	Mac installer (includes bundled 64-bit Java Runtime)
jbr-1.0.5577.tar.gz	Linux archive (includes bundled 64-bit Java Runtime)
jbr-1.0.5577.jar	Java archive file

Changes:

• Significantly faster web browser
• Enhanced large BED files rendering with advanced indexing
• Group scale mode for selected tracks
• Headless screenshots done from command line interface
• Support the latest SPAN release
• Advanced SPAN results visualization including underlying HMM model states
• Fixed web-based browser navigation when position is provided in URL
• Check for updates on startup
• Simplified web UI - removed logs view
• New version of bundled Amazon Corretto JRE
• Updated Docker image
• Bugfixes

v1.0.beta.5320

Version 1.0.beta.5320

Released on March 24, 2021

Download	Description
jbr-1.0.beta.5320.zip	Windows archive (includes bundled 64-bit Java Runtime)
jbr-1.0.beta.5320.dmg	Mac installer (includes bundled 64-bit Java Runtime)
jbr-1.0.beta.5320.tar.gz	Linux archive (includes bundled 64-bit Java Runtime)
jbr-1.0.beta.5320.jar	Java archive file

Changes:

• Custom genome configuration editor
• Import and export of IGV sessions
• Import and export of UCSC sessions
• Improved searching and loading tracks from ENCODE portal
• Improved server mode memory consumption
• New version of bundled Amazon Corretto JRE
• Custom log file location support
• Docker image for easily set-up a server
• Bugfixes

1.0.beta.5189

Version 1.0.beta.5198

Released on Apr 22, 2020

• Latest SPAN 0.12.0.5096 support
• Support for searching and loading tracks from ENCODE portal
• Server mode visualizing single or multiple sessions in web browser.
  See example at https://artyomovlab.wustl.edu/jbr/
• Full support of High DPI displays
• Fixes

Download URLs:

• Widows 64-bit ZIP archive (includes bundled 64-bit Java Runtime) https://download.jetbrains.com/biolabs/jbr_browser/win/jbr-1.0.beta.5189.zip
• Mac installer (includes bundled 64-bit Java Runtime) https://download.jetbrains.com/biolabs/jbr_browser/mac/jbr-1.0.beta.5189.dmg
• Linux archive (includes bundled 64-bit Java Runtime) https://download.jetbrains.com/biolabs/jbr_browser/linux/jbr-1.0.beta.5189.tar.gz

1.0.beta.4882

Version 1.0.beta.4882

Released on May 17, 2019

• Latest SPAN 0.11.0.4882 support
• Now files without extension or with any extension could be opened as BED files (e.g. SICER files w/o extension)
• UI fixes (Genes track view blinking, Cytobands legend alignment, ..)
• Fixed executable flag for *.sh files in Linux distribution
• Support for any BED3+ files, BED file auto-format feature improved

Download URLs:

• Widows 64-bit ZIP archive (includes bundled 64-bit Java Runtime) https://download.jetbrains.com/biolabs/jbr_browser/win/jbr-1.0.beta.4882_x64.zip
• Windows 32-bit ZIP archive (includes bundled 32-bit Java Runtime) https://download.jetbrains.com/biolabs/jbr_browser/win/jbr-1.0.beta.4882_x86.zip
• Mac installer (includes bundled 64-bit Java Runtime) https://download.jetbrains.com/biolabs/jbr_browser/mac/jbr-1.0.beta.4882.dmg
• Linux archive (includes bundled 64-bit Java Runtime) https://download.jetbrains.com/biolabs/jbr_browser/linux/jbr-1.0.beta.4882.tar.gz

1.0.beta.4800

Version 1.0.beta.4880

Released on March 24, 2019