build(compare-meshes): add pixi python configuration

packages/compare-meshes/.gitignore

@@ -7,3 +7,4 @@ test
 typescript/src/version.ts
 typescript/dist
 typescript/demo-app
+pyodide/

packages/compare-meshes/.npmrc

@@ -0,0 +1 @@
+git-checks=false

packages/compare-meshes/package.json

@@ -1,9 +1,8 @@
 {
   "name": "@itk-wasm/compare-meshes-build",
-  "version": "0.1.0",
+  "version": "0.4.1",
   "private": true,
-  "packageManager": "[email protected]",
-  "description": "Scripts to generate compare-meshes itk-wasm artifacts.",
+  "description": "@itk-wasm/compare-meshes build configuration.",
   "type": "module",
   "itk-wasm": {
     "emscripten-docker-image": "itkwasm/emscripten:latest",
@@ -28,22 +27,18 @@
     "bindgen:typescript": "itk-wasm pnpm-script bindgen:typescript",
     "bindgen:python": "itk-wasm pnpm-script bindgen:python",
     "build:gen:typescript": "itk-wasm pnpm-script build:gen:typescript",
-    "build:gen:python": "itk-wasm pnpm-script build:gen:python",
-    "build:micromamba": "itk-wasm pnpm-script build:micromamba",
-    "build:python:versionSync": "itk-wasm pnpm-script build:python:versionSync",
-    "publish:python": "itk-wasm pnpm-script publish:python",
+    "build:gen:python": "pnpm build:wasi && pnpm bindgen:python",
     "test": "pnpm test:data:download && pnpm build:gen:python && pnpm test:python",
     "test:data:download": "dam download test/data test/data.tar.gz bafkreidioh62iouwzrrpavx7g72fdjxze7gp4cqpf36t4pdafcpcmx4zye https://github.com/InsightSoftwareConsortium/ITK-Wasm/releases/download/itk-wasm-v1.0.0-b.171/itkwasm-compare-meshes-test-data.tar.gz",
     "test:data:pack": "dam pack test/data test/data.tar.gz",
-    "test:python:wasi": "itk-wasm pnpm-script test:python:wasi",
-    "test:python:emscripten": "itk-wasm pnpm-script test:python:emscripten",
-    "test:python:dispatch": "itk-wasm pnpm-script test:python:emscripten",
+    "test:python:wasi": "pnpm test:data:download && pixi run test-wasi",
+    "test:python:emscripten": "pnpm test:data:download && pixi run test-emscripten",
+    "test:python:dispatch": "pnpm test:data:download && pixi run test-dispatch",
     "test:python": "itk-wasm pnpm-script test:python",
     "test:wasi": "itk-wasm pnpm-script test:wasi"
   },
   "devDependencies": {
     "@itk-wasm/dam": "^1.1.1",
-    "@thewtex/setup-micromamba": "^1.9.7",
     "itk-wasm": "workspace:^",
     "@itk-wasm/mesh-io-build": "workspace:^",
     "@itk-wasm/compare-meshes-build": "workspace:^"

packages/compare-meshes/pixi.toml

@@ -0,0 +1,140 @@
+[project]
+authors = ["Matt McCormick <[email protected]>"]
+channels = ["conda-forge"]
+description = "Compare meshes with a tolerance for regression testing."
+name = "compare-meshes"
+platforms = ["win-64", "linux-64", "linux-aarch64", "osx-arm64"]
+version = "0.1.0"
+
+[tasks]
+
+[dependencies]
+python = "3.12.*"
+pnpm = ">=9.12.1,<10"
+hatch = ">=1.13.0,<2"
+pip = ">=24.2,<25"
+
+[target.win-64.dependencies]
+m2w64-jq = ">=1.6.0,<2"
+
+[target.unix.dependencies]
+jq = ">=1.7.1,<2"
+
+[tasks.version-sync-typescript]
+cmd = '''version=$(cat package.json | jq .version) &&
+  jq ".version = $version" typescript/package.json > typescript/package.json.tmp &&
+  mv typescript/package.json.tmp typescript/package.json'''
+
+[tasks.version-sync-python-wasi]
+cmd = '''version=$(cat ../../package.json | jq -r .version) &&
+  echo "version is $version" &&
+  hatch version $version'''
+cwd = "python/itkwasm-compare-meshes-wasi"
+
+[tasks.version-sync-python-emscripten]
+cmd = '''version=$(cat ../../package.json | jq -r .version) &&
+  hatch version $version'''
+cwd = "python/itkwasm-compare-meshes-emscripten"
+
+[tasks.version-sync-python-dispatch]
+cmd = '''version=$(cat ../../package.json | jq -r .version) &&
+  hatch version $version'''
+cwd = "python/itkwasm-compare-meshes"
+
+[tasks.version-sync]
+depends-on = ["version-sync-typescript", "version-sync-python-wasi", "version-sync-python-emscripten", "version-sync-python-dispatch"]
+description = "Synchronize package versions"
+
+[tasks.publish-typescript]
+cmd = "pnpm publish --filter \"{typescript}\""
+
+[tasks.publish-python-user-check]
+cmd = "if [ -n \"$HATCH_INDEX_USER\"]; then echo \"HATCH_INDEX_USER is set\"; else echo \"HATCH_INDEX_USER is not set\"; exit 1; fi"
+
+[tasks.publish-python-wasi]
+cmd = '''hatch build &&
+  hatch publish'''
+cwd = "python/itkwasm-compare-meshes-wasi"
+
+[tasks.publish-python-emscripten]
+cmd = '''hatch build &&
+  hatch publish'''
+cwd = "python/itkwasm-compare-meshes-emscripten"
+
+[tasks.publish-python-dispatch]
+cmd = '''hatch build &&
+  hatch publish'''
+cwd = "python/itkwasm-compare-meshes"
+
+[tasks.publish]
+depends-on = ["publish-typescript", "publish-python-wasi", "publish-python-emscripten", "publish-python-dispatch"]
+description = "Synchronize package versions"
+
+[feature.python.dependencies]
+pytest = ">=8.3.3,<9"
+
+[feature.python.pypi-dependencies]
+itkwasm-compare-meshes-wasi = { path = "python/itkwasm-compare-meshes-wasi", editable = true }
+itkwasm-compare-meshes = { path = "python/itkwasm-compare-meshes", editable = true }
+pyodide-py = ">=0.26.3, <0.27"
+pytest-pyodide = ">=0.58.3, <0.59"
+itk-webassemblyinterface = ">=1.0b175, <2"
+itkwasm-image-io = ">=1.3.0, <2"
+
+[feature.python.tasks.test-wasi]
+cmd = "pytest"
+cwd = "python/itkwasm-compare-meshes-wasi"
+description = "Run tests for itkwasm-compare-meshes-wasi"
+
+[feature.python.tasks.download-pyodide]
+cmd = '''curl -L https://github.com/pyodide/pyodide/releases/download/0.26.3/pyodide-0.26.3.tar.bz2 -o pyodide.tar.bz2 &&
+  tar xjf pyodide.tar.bz2 &&
+  rm pyodide.tar.bz2'''
+outputs = ["pyodide"]
+description = "Download Pyodide"
+
+[feature.python.tasks.test-emscripten]
+cmd = '''mkdir -p dist/pyodide &&
+  cp -r ../../pyodide dist/ &&
+  hatch build -t wheel ./dist/pyodide/ &&
+  pytest --dist-dir=./dist/pyodide --rt=chrome'''
+cwd = "python/itkwasm-compare-meshes-emscripten"
+depends-on = ["download-pyodide"]
+description = "Run tests for itkwasm-compare-meshes-emscripten"
+
+[feature.python.tasks.serve-emscripten]
+cmd = '''mkdir -p dist/pyodide &&
+  cp -r ../../pyodide dist/ &&
+  hatch build -t wheel ./dist/pyodide/ &&
+  echo \"\nVisit http://localhost:8877/console.html\n\" &&
+  python -m http.server --directory=./dist/pyodide 8877'''
+cwd = "python/itkwasm-compare-meshes-emscripten"
+depends-on = ["download-pyodide"]
+description = "Serve itkwasm-compare-meshes-emscripten for development"
+
+[feature.python.tasks.test-dispatch]
+cmd = '''mkdir -p dist/pyodide &&
+  cp -r ../../pyodide dist/ &&
+  hatch build -t wheel ./dist/pyodide/ &&
+  cp ../itkwasm-compare-meshes-emscripten/dist/pyodide/itkwasm_compare_meshes_emscripten*.whl ./dist/pyodide/ &&
+  pytest --dist-dir=./dist/pyodide --rt=chrome'''
+cwd = "python/itkwasm-compare-meshes"
+depends-on = ["download-pyodide"]
+description = "Run tests for itkwasm-compare-meshes"
+
+[feature.python.tasks.serve-dispatch]
+cmd = '''mkdir -p dist/pyodide &&
+  cp -r ../../pyodide dist/ &&
+  hatch build -t wheel ./dist/pyodide/ &&
+  echo \"\nVisit http://localhost:8877/console.html\n\" &&
+  python -m http.server --directory=./dist/pyodide 8877'''
+cwd = "python/itkwasm-compare-meshes"
+depends-on = ["download-pyodide"]
+description = "Serve itkwasm-compare-meshes for development"
+
+[feature.python.tasks.test-python]
+depends-on = ["test-wasi", "test-emscripten", "test-dispatch"]
+description = "Run tests for all Python packages"
+
+[environments]
+python = ["python"]

packages/compare-meshes/typescript/package.json

@@ -1,7 +1,6 @@
 {
   "name": "@itk-wasm/compare-meshes",
   "version": "0.4.0",
-  "packageManager": "[email protected]",
   "description": "Compare meshes and polydata for regression testing.",
   "type": "module",
   "module": "./dist/index.js",
@@ -37,7 +36,7 @@
     "itk-wasm": "workspace:^"
   },
   "devDependencies": {
-    "@itk-wasm/mesh-io": "workspace:^",
+    "@itk-wasm/mesh-io": "workspace:*",
     "@itk-wasm/demo-app": "workspace:*",
     "@types/node": "^20.2.5",
     "esbuild": "^0.19.8",

packages/mesh-io/typescript/package.json

@@ -1,7 +1,6 @@
 {
   "name": "@itk-wasm/mesh-io",
   "version": "1.4.1",
-  "packageManager": "[email protected]",
   "description": "Input and output for scientific and medical image file formats.",
   "type": "module",
   "module": "./dist/index.js",