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Remove workaround for #126.
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balhoff committed Feb 12, 2024
1 parent 7e1d652 commit 6f37d01
Showing 1 changed file with 1 addition and 3 deletions.
4 changes: 1 addition & 3 deletions Makefile
Original file line number Diff line number Diff line change
Expand Up @@ -198,13 +198,11 @@ oarcs-base.owl: oarcs.owl
--trim false \
--output $@

# Passing through RDF/XML to riot is due to https://github.com/INCATools/ubergraph/issues/126
ontologies-merged.ttl: mirror
$(ROBOT) merge $(addprefix -i mirror/,$(shell ls mirror)) \
remove --axioms 'disjoint' --trim true --preserve-structure false \
remove --term 'owl:Nothing' --trim true --preserve-structure false \
reason -r ELK -D debug.ofn -o $@.owl &&\
riot -q --nocheck --output=turtle $@.owl >$@
reason -r ELK -D debug.ofn -o $@

ontologies-merged.ofn.gz: ontologies-merged.ttl
$(ROBOT) convert -i $< -o ontologies-merged.ofn && gzip ontologies-merged.ofn
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