Add G groups, frequency data, and update protein sequence to #90

Draft

apmody wants to merge 42 commits intomasterfrom G_group

+127,804-46,679

Commits on Mar 12, 2021

First pass: Get G groups, get full CDS sequences, import population group terms
apmody
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Reworked parsing of hla.dat file, add template strings
apmody
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Commits on Mar 18, 2021

Get appropriate exons for G group when MHC allele is class I (exon 2 and 3) or class II (exon 2)
apmody
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Merge branch 'master' into G_group
apmody
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Commits on Mar 21, 2021

Commits on Mar 22, 2021

Commits on Mar 23, 2021

Commits on Mar 24, 2021

Added code to verify accession numbers from frequency data and build/hla.dat file
apmody
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Commits on Mar 25, 2021

Commits on Mar 29, 2021

Added helper function for getting G group exons, removed requirement for protein match between current MRO and allele
apmody
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Commits on Mar 30, 2021

Commits on Apr 7, 2021

Commits on Apr 8, 2021

Commits on Apr 10, 2021

Added NCIT terms for MHC genes.
apmody
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Commits on Apr 15, 2021

Commits on Apr 27, 2021

Change table name in Makefile, added allele information
apmody
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Commits on Jun 25, 2021

Merge branch 'master' into G_group
apmody
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Commits on Jul 8, 2021

Drop repeated two-field entries. Add World instead of Total population. Use rdfs:isDefinedBy for allele definitions.
apmody
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Commits on Jul 10, 2021

Update Makefile for update_gene_alleles_seq.py
apmody
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Commits on Jul 26, 2021