Slight mod

GMOD · Jan 7, 2024 · 8e94c66 · 8e94c66
1 parent 0c8bff4
commit 8e94c66
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Showing 5 changed files with 169 additions and 179 deletions.
diff --git a/lib/src/components/ImportForm/ImportFormExamples.tsx b/lib/src/components/ImportForm/ImportFormExamples.tsx
@@ -68,7 +68,7 @@ const ImportFormExamples = observer(function ({
         model={model}
         onClick={() =>
           load(model, {
-            uri: 'https://ihh.github.io/abrowse/build/pfam-cov2.stock',
+            uri: 'https://jbrowse.org/genomes/multiple_sequence_alignments/pfam-cov2.stock',
             locationType: 'UriLocation',
           })
         }

diff --git a/lib/src/components/Minimap.tsx b/lib/src/components/Minimap.tsx
@@ -5,10 +5,10 @@ import { MsaViewModel } from '../model'
 const Minimap = observer(function ({ model }: { model: MsaViewModel }) {
   const { scrollX, msaAreaWidth: W, colWidth, numColumns } = model
   const unit = W / numColumns
-  const start = -scrollX / colWidth
-  const end = -scrollX / colWidth + W / colWidth
-  const s = start * unit
-  const e = end * unit
+  const left = -scrollX
+  const right = left + W
+  const s = (left / colWidth) * unit
+  const e = (right / colWidth) * unit
   const HEIGHT = 56
   const TOP = 10
   const fill = 'rgba(66, 119, 127, 0.3)'

diff --git a/lib/src/components/Ruler/index.tsx b/lib/src/components/Ruler/index.tsx
diff --git a/lib/src/model.ts b/lib/src/model.ts
@@ -640,7 +640,7 @@ const model = types
      * #getter
      */
     get numColumns() {
-      return ((this.MSA?.getWidth() || 0) - this.blanks.length) 
+      return (this.MSA?.getWidth() || 0) - this.blanks.length
     },
     /**
      * #getter