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update changelog and changesum for ctsm5.1.dev145
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=============================================================== | ||
Tag name: ctsm5.1.dev146 | ||
Originator(s): glemieux (Gregory Lemieux, LBNL, [email protected]) | ||
Date: Mon Oct 23 15:22:00 PM MDT 2023 | ||
One-line Summary: FATES cross-grid seed dispersal | ||
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Purpose and description of changes | ||
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This PR enables FATES to disperse seeds across neighboring grid cells using MPI. | ||
The API update includes calls to new fates dispersal procedures. There are | ||
four parameters that are utilized to control the dispersal kernel, although | ||
these were introduced in ctsm5.1.dev130 so no new default FATES parameter file | ||
is necessary with this update. A new namelist parameter has been added to | ||
enable the use of the seed dispersal mode. | ||
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Significant changes to scientifically-supported configurations | ||
-------------------------------------------------------------- | ||
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Does this tag change answers significantly for any of the following physics configurations? | ||
(Details of any changes will be given in the "Answer changes" section below.) | ||
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[Put an [X] in the box for any configuration with significant answer changes.] | ||
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[ ] clm5_1 | ||
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[ ] clm5_0 | ||
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[ ] ctsm5_0-nwp | ||
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[ ] clm4_5 | ||
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Bugs fixed or introduced | ||
------------------------ | ||
Known bugs introduced in this tag (include issue #): | ||
- ESCOMP/CTSM#1089 (Cross-grid seed dispersal mechanism is not b4b for PE layout changes) | ||
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Notes of particular relevance for users | ||
--------------------------------------- | ||
Changes to CTSM's user interface (e.g., new/renamed XML or namelist variables): | ||
- New namelist option, fates_seeddisp_cadence, added. This option Setting the switch | ||
value to zero turns off dispersal. Setting the switch to 1, 2, or 3 sets the dispersal | ||
cadence to daily, monthly or yearly. | ||
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Substantial timing or memory changes: | ||
- Users should be careful to limit the maximum dispersal distance parameter, | ||
fates_seed_dispersal_max_dist, to a reasonable value based on the gridcell | ||
resolution used. Using a very large value will increase the memory requirements | ||
to store the gridcell neighborhood information. | ||
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Notes of particular relevance for developers: | ||
--------------------------------------------- | ||
Caveats for developers (e.g., code that is duplicated that requires double maintenance): | ||
- This PR introduces MPI calls to subroutines that are called by clm_driver. | ||
Comments have been provided in code to make future developers aware of these | ||
calls so as to avoid moving them into OpenMP threaded regions. | ||
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Changes to tests or testing: | ||
- Two new testmods have been added into the fates suite to test seed | ||
dispersal. One of the tests is to track issue CTSM#1089 which was introduced | ||
with this PR. | ||
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Testing summary: | ||
---------------- | ||
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[PASS means all tests PASS; OK means tests PASS other than expected fails.] | ||
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regular tests (aux_clm: https://github.com/ESCOMP/CTSM/wiki/System-Testing-Guide#pre-merge-system-testing): | ||
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cheyenne ---- OK | ||
izumi ------- PASS | ||
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fates tests: (give name of baseline if different from CTSM tagname, normally fates baselines are fates-<FATES TAG>-<CTSM TAG>) | ||
cheyenne ---- OK | ||
izumi ------- OK | ||
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Answer changes | ||
-------------- | ||
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Changes answers relative to baseline: Only fates testmods in aux_clm are | ||
answer changing due to science updates associated with externals update. | ||
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Other details | ||
------------- | ||
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List any externals directories updated (cime, rtm, mosart, cism, fates, etc.): | ||
- fates: sci.1.67.2_api.27.0.0 -> sci.1.68.0_api.28.0.0 | ||
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Pull Requests that document the changes (include PR ids): | ||
https://github.com/ESCOMP/CTSM/pull/2077 | ||
https://github.com/NGEET/fates/pull/1005 | ||
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=============================================================== | ||
=============================================================== | ||
Tag name: ctsm5.1.dev145 | ||
Originator(s): @cenlinhe (Cenlin He,UCAR/RAL), slevis (Samuel Levis,UCAR/TSS,303-665-1310) | ||
Date: Thu Oct 19 14:34:25 MDT 2023 | ||
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