2019-10-15 EFO 3.11.0
EFO 3.11.0 release includes further alignments between EFO and MONDO and further terms required for the GWAS Catalog, Human Cell Atlas and the Single Cell Atlas. It also includes a big change in the EFO build pipeline, which has caused a reduced number of UBERON terms being imported into EFO. UBERON terms can now be requested for importation into EFO on our tracker.
General Stats:
Number of classes changed: 11724
Number of classes added: 318
Number of classes deleted: 10845
We have also generated efo.json, which will require testing. If you plan to use the JSON file, please let us know if you find any errors or issues, thank you.
For Open Targets, we have also generated an Open Targets profile (which contains all of EFO with the new Open Targets therapeutic areas) and slim file (which contains just Open Targets therapeutic areas). Both are also attached to this release.