fix HRA config and neo4j csv issue

EBISPOT · Oct 29, 2024 · 7afed23 · 7afed23
1 parent d737948
commit 7afed23
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Showing 2 changed files with 2 additions and 2 deletions.
diff --git a/06_prepare_db_import/grebi_make_neo_csv/src/main.rs b/06_prepare_db_import/grebi_make_neo_csv/src/main.rs
@@ -316,7 +316,7 @@ fn write_edge(src_line:&[u8], edge:SlicedEdge, all_edge_props:&HashSet<String>,
             edges_writer.write_all(&[(31 as u8)]).unwrap();
         }
         edges_writer.write_all(
-            &get_escaped_value(JsonParser::parse(sid).string())
+            &get_escaped_value(sid)
         ).unwrap();
     });
     edges_writer.write_all(b"\"").unwrap();

diff --git a/configs/datasource_configs/hra_kg.yaml b/configs/datasource_configs/hra_kg.yaml
@@ -3,6 +3,6 @@ enabled: true
 ingests:
   - globs: ["/nfs/production/parkinso/spot/hra/dataload/tmp/out/ontologies.json"]
     command: '
-      grebi_ingest_ols
+      grebi_ingest_ols --datasource-name $GREBI_INGEST_DATASOURCE_NAME
           --ontologies ccf,hra
     '