test

EBI-Metagenomics · Feb 20, 2024 · 42a068b · 42a068b
1 parent c3ab4d6
commit 42a068b
Showing 1 changed file with 5 additions and 2 deletions.
diff --git a/genomeuploader/genome_upload.py b/genomeuploader/genome_upload.py
@@ -402,7 +402,7 @@ def extract_ENA_info(genomeInfo, uploadDir, webin, password):
                         sampleInfo = ena.get_sample(sampleAccession, webin, password)
                         print(sampleInfo)
                         location = sampleInfo["location"]
-                        latitude, longitude = '', ''
+                        latitude, longitude = None, None
                         if 'N' in location:
                             latitude = location.split('N')[0].strip()
                             longitude = location.split('N')[1].strip()
@@ -415,12 +415,15 @@ def extract_ENA_info(genomeInfo, uploadDir, webin, password):
                         elif longitude.endswith('E'):
                             longitude = longitude.split('E')[0].strip()
 
+                        print(latitude, longitude)
                         if latitude:
+                            print('!')
                             latitude = "{:.8f}".format(float(latitude))
                         else:
                             latitude = "not provided"
-
+                        print(latitude, longitude)
                         if longitude:
+                            print('!!!')
                             latitude = "{:.8f}".format(float(longitude))
                         else:
                             longitude = "not provided"