Add mpi4py in the env

DiamondLightSource · Nov 11, 2024 · 141ceb0 · 141ceb0
1 parent 4efbd27
commit 141ceb0
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Showing 2 changed files with 9 additions and 8 deletions.
diff --git a/conda/environment.yml b/conda/environment.yml
@@ -5,6 +5,7 @@ channels:
 dependencies:
   - conda-forge::pyyaml
   - conda-forge::tomopy=1.15
+  - conda-forge::mpi4py
   - httomo::httomolib=2.1.2
   - httomo::httomolibgpu=2.1.2
   - httomo::tomobar
diff --git a/tests/test_httomolibgpu.py b/tests/test_httomolibgpu.py
@@ -17,8 +17,8 @@
 httomolibgpu = pytest.importorskip("httomolibgpu")
 import cupy as cp
 
-from httomo.methods_database.query import get_method_info
-from httomo.utils import OutputRef
+from httomo_backends.methods_database.query import get_method_info
+from httomo_backends.utils import OutputRef
 
 
 from httomolibgpu.misc.morph import data_resampler, sino_360_to_180
@@ -35,12 +35,12 @@
 from httomolibgpu.recon.algorithm import FBP, SIRT, CGLS
 from httomolibgpu.misc.rescale import rescale_to_int
 
-from httomo.methods_database.packages.external.httomolibgpu.supporting_funcs.misc.morph import *
-from httomo.methods_database.packages.external.httomolibgpu.supporting_funcs.prep.phase import *
-from httomo.methods_database.packages.external.httomolibgpu.supporting_funcs.prep.stripe import *
-from httomo.methods_database.packages.external.httomolibgpu.supporting_funcs.recon.algorithm import *
-from httomo.methods_database.packages.external.httomolibgpu.supporting_funcs.misc.rescale import *
-from httomo.methods_database.packages.external.httomolibgpu.supporting_funcs.prep.normalize import *
+from httomo_backends.methods_database.backends.httomolibgpu.supporting_funcs.misc.morph import *
+from httomo_backends.methods_database.backends.httomolibgpu.supporting_funcs.prep.phase import *
+from httomo_backends.methods_database.backends.httomolibgpu.supporting_funcs.prep.stripe import *
+from httomo_backends.methods_database.backends.httomolibgpu.supporting_funcs.recon.algorithm import *
+from httomo_backends.methods_database.backends.httomolibgpu.supporting_funcs.misc.rescale import *
+from httomo_backends.methods_database.backends.httomolibgpu.supporting_funcs.prep.normalize import *
 
 from tests.testing_utils import make_test_method