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@DeepGraphLearning

MilaGraph

Research group led by Prof. Jian Tang at Mila-Quebec AI Institute (https://mila.quebec/) focusing on graph representation learning and graph neural networks.

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  1. torchdrug torchdrug Public

    A powerful and flexible machine learning platform for drug discovery

    Python 1.5k 201

  2. ULTRA ULTRA Public

    A foundation model for knowledge graph reasoning

    Python 502 68

  3. GMNN GMNN Public

    Graph Markov Neural Networks

    Python 403 100

  4. GearNet GearNet Public

    GearNet and Geometric Pretraining Methods for Protein Structure Representation Learning, ICLR'2023 (https://arxiv.org/abs/2203.06125)

    Python 280 30

  5. NBFNet NBFNet Public

    Official implementation of Neural Bellman-Ford Networks (NeurIPS 2021)

    Python 200 30

  6. ConfGF ConfGF Public

    Implementation of Learning Gradient Fields for Molecular Conformation Generation (ICML 2021).

    Python 162 35

Repositories

Showing 10 of 48 repositories
  • S3F Public

    Sequence-Structure-Surface Model for Protein Fitness Prediction (S3F)

    DeepGraphLearning/S3F’s past year of commit activity
    Python 23 MIT 2 1 0 Updated Dec 3, 2024
  • MATH60630A_2024A Public
    DeepGraphLearning/MATH60630A_2024A’s past year of commit activity
    SCSS 0 0 0 0 Updated Nov 21, 2024
  • scCello Public

    [NeurIPS 2024 Spotlight] A cell-ontology guided transcriptome foundation model

    DeepGraphLearning/scCello’s past year of commit activity
    3 0 1 0 Updated Oct 29, 2024
  • ULTRA Public

    A foundation model for knowledge graph reasoning

    DeepGraphLearning/ULTRA’s past year of commit activity
    Python 502 MIT 68 2 0 Updated Oct 2, 2024
  • GearBind Public

    Pretrainable geometric graph neural network for antibody affinity maturation

    DeepGraphLearning/GearBind’s past year of commit activity
    Python 41 Apache-2.0 5 6 0 Updated Aug 21, 2024
  • torchdrug Public

    A powerful and flexible machine learning platform for drug discovery

    DeepGraphLearning/torchdrug’s past year of commit activity
    Python 1,464 Apache-2.0 201 110 (1 issue needs help) 12 Updated Aug 12, 2024
  • graphvite Public

    GraphVite: A General and High-performance Graph Embedding System

    DeepGraphLearning/graphvite’s past year of commit activity
    C++ 1,239 Apache-2.0 155 53 0 Updated Jun 14, 2024
  • GraphAny Public

    GraphAny: A foundation model for node classification on any graph.

    DeepGraphLearning/GraphAny’s past year of commit activity
    Python 118 MIT 9 1 0 Updated Jun 7, 2024
  • esm-s Public

    Structure-Informed Protein Language Model

    DeepGraphLearning/esm-s’s past year of commit activity
    Python 27 4 3 0 Updated Feb 15, 2024
  • KnowledgeGraphEmbedding Public
    DeepGraphLearning/KnowledgeGraphEmbedding’s past year of commit activity
    Python 1,294 MIT 268 6 2 Updated Dec 15, 2023
View all repositories

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