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Update QC_LD_filter.sh
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Crazzy-Rabbit authored Jun 26, 2023
1 parent 7c88a32 commit cbd1688
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion 01.分析前过滤/QC_LD_filter.sh
Original file line number Diff line number Diff line change
Expand Up @@ -21,7 +21,7 @@ out=$5
# Check if the input file is vcf file, to geno and maf
if [[ "${file##*.}" = "vcf" ]]; then
plink --allow-extra-chr --chr-set $chr -vcf $file --double-id --geno $geno --maf $maf --make-bed --out $out
else;
else
plink --allow-extra-chr --chr-set $chr -bfile $file --geno $geno --maf $maf --make-bed --out $out
fi

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