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Control-FREEC v9.9 - subclone detection now works

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@valeu valeu released this 24 Nov 13:32
· 47 commits to master since this release

Suggested use for subclone detection:
minimalSubclonePresence = 0.2
This will identify possible subclones present in >20% of cell population

Also, one can use sambamba for bam reading and minipileup creation.