Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Test fix for docker actions failing after miniforge #744

Merged
merged 2 commits into from
Sep 3, 2024

Conversation

jashapiro
Copy link
Member

Looking at the changes made in #740, I think the most likely culprit for the failures in #743 is that I had removed adding conda.sh to /etc/profile.d. It seems possible (likely) that GHA isn't activating .bashrc when running its jobs, but hope it is the fix. I am just including the cell-type-ewings module for now. If this works after testing, I will add the same changes to all docker files and instructions.

Copy link
Member

@jaclyn-taroni jaclyn-taroni left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

👍🏻 if it passes

@jaclyn-taroni
Copy link
Member

@jashapiro - the analysis module is what is failing?

@jashapiro
Copy link
Member Author

@jashapiro - the analysis module is what is failing?

The analysis module failed because it is still pulling the old Docker image, yes.

@jashapiro jashapiro merged commit f9f1386 into AlexsLemonade:main Sep 3, 2024
4 checks passed
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

2 participants