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AMICI v0.9.0
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@FFroehlich FFroehlich released this 18 Jan 14:39
· 1599 commits to master since this release
v0.9.0
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Learn about vigilant mode.

Features / improvements:

  • Allow computation and application of conservation laws for pysb importet models. This enables use of NewtonSolver for preequilibration for models where it was previously not possible.
  • Use klu_refactor in the sparse Newton solver instead of always using klu_factor and only perform symbolic factorization once (#421)
  • Allow more detailed finiteness checks (#514)

Bugfixes:

Maintenance:

  • Several improvements to travis log sizes and folding
  • Use default copy constructor for Model by implementing class wrappers for sundials matrix types (#516)
  • Reenable run of SBML testsuite
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