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AMICI v0.11.14
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@dweindl dweindl released this 16 Mar 14:13
· 877 commits to master since this release
v0.11.14
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New features:

  • Python model import now supports SBML Events (#1443)
  • Implement support for compilation without sensitivities (#1454)

Fixes:

  • Issue #1446: Check whether constant parameters are valid targets (#1450)
  • Issue #1422: Fix Steadystate solver failing if preequilibration starts in
    steadystate (#1461)
  • Issue #1401: Ensure diagnostics variables in ReturnData are always of
    expected length (#1438, #1447)
  • Fix FIM approximation for parameter dependent sigma (#1441)
  • Fix invalid SBML in PEtab/PySB import (#1433)
  • Fix: No context for inspect.getouterframes (#1432)

Documentation:

  • Added this CHANGELOG
  • Added feature request issue template (#1437)
  • Updated reference list (#1430)
  • Overhauled experimental conditions notebook (#1460)

CI:

  • Test Matlab interface on GHA (#1451)
  • Include componentTags in SBML test suite output (#1462)
  • Split SBML semantic test suite into multiple jobs (#1452)
  • Fix Crauste ref val, fixes #1458 (#1459)

Misc:

  • Various cleanup (#1465, #1448, #1455)
  • Optimize SUNMatrixWrapper::transpose (#1439)
  • Remove constant triggers from roots in Heaviside (#1440)
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