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Update 1deg_jra55_ryf_bgc for WOMBAT sea-ice coupling bug-fix and new CICE grid #129

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merged 6 commits into from
Jul 10, 2024
Merged

Update 1deg_jra55_ryf_bgc for WOMBAT sea-ice coupling bug-fix and new CICE grid #129

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636d753
New CICE grid
anton-seaice Apr 17, 2024
521da90
Updated CI in line with 0e6c9b61abeb51bbb6074af4ff8a66845d958bb9
CodeGat Jun 19, 2024
448d342
Update to access-om2-bgc 2024.07.0
dougiesquire Jul 2, 2024
bd45b97
New CICE grid
anton-seaice Apr 17, 2024
1cc1d88
Merge pull request #122 from ACCESS-NRI/issue115-1deg_jra55_ryf_bgc
dougiesquire Jul 10, 2024
2ba113d
Updated checksums and bumped version to 3.0 as part of https://github…
access-bot Jul 10, 2024
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12 changes: 6 additions & 6 deletions config.yaml
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Original file line number Diff line number Diff line change
Expand Up @@ -31,15 +31,15 @@ input:
submodels:
- name: atmosphere
model: yatm
exe: /g/data/vk83/apps/spack/0.20/release/linux-rocky8-x86_64/intel-19.0.5.281/libaccessom2-git.2023.10.26=2023.10.26-ltfg7jcn6t4cefotvj3kjnyu5nru26xo/bin/yatm.exe
exe: /g/data/vk83/apps/spack/0.22/release/linux-rocky8-x86_64/intel-19.0.5.281/libaccessom2-git.2023.10.26_2023.10.26-xarvbgn4yf4mxy5hxixm4gfbp7rbzsfh/bin/yatm.exe
input:
- /g/data/vk83/experiments/inputs/access-om2/remapping_weights/JRA55/global.1deg/2020.05.30/rmp_jrar_to_cict_CONSERV.nc
- /g/data/vk83/experiments/inputs/JRA-55/RYF/v1-4/data
ncpus: 1

- name: ocean
model: mom
exe: /g/data/vk83/apps/spack/0.20/release/linux-rocky8-x86_64/intel-19.0.5.281/mom5-git.2023.11.09=2023.11.09-64l5azdtcoxhrgb5ynn2vued5lmjvn33/bin/fms_ACCESS-OM-BGC.x
exe: /g/data/vk83/apps/spack/0.22/release/linux-rocky8-x86_64/intel-19.0.5.281/mom5-git.2024.06.27_2024.06.27-q6bpwu526xql2gm6dbpnvf36yvnfxynj/bin/fms_ACCESS-OM-BGC.x
input:
- /g/data/vk83/experiments/inputs/access-om2/ocean/biogeochemistry/global.1deg/2022.02.24/bgc_param.nc
- /g/data/vk83/experiments/inputs/access-om2/ocean/biogeochemistry/global.1deg/2022.02.24/co2_iaf.nc
Expand All @@ -64,12 +64,12 @@ submodels:

- name: ice
model: cice5
exe: /g/data/vk83/apps/spack/0.20/release/linux-rocky8-x86_64/intel-19.0.5.281/cice5-git.2023.10.19=2023.10.19-v3zncpqjj2gyseudbwiudolcjq3k3leo/bin/cice_auscom_360x300_24x1_24p.exe
exe: /g/data/vk83/apps/spack/0.22/release/linux-rocky8-x86_64/intel-19.0.5.281/cice5-git.2023.10.19_2023.10.19-4tttbvaxg4afg3hjcrfaah6qngp43e5e/bin/cice_auscom_360x300_24x1_24p.exe
input:
- /g/data/vk83/experiments/inputs/access-om2/ice/grids/global.1deg/2024.04.17/grid.nc
- /g/data/vk83/experiments/inputs/access-om2/ice/grids/global.1deg/2024.04.17/kmt.nc
- /g/data/vk83/experiments/inputs/access-om2/ice/initial_conditions_biogeochemistry/global.1deg/2022.02.24/i2o.nc
- /g/data/vk83/experiments/inputs/access-om2/ice/initial_conditions_biogeochemistry/global.1deg/2022.02.24/o2i.nc
- /g/data/vk83/experiments/inputs/access-om2/ice/grids/global.1deg/2020.05.30/grid.nc
- /g/data/vk83/experiments/inputs/access-om2/ice/grids/global.1deg/2020.10.22/kmt.nc
- /g/data/vk83/experiments/inputs/access-om2/ice/initial_conditions/global.1deg/2020.05.30/u_star.nc
- /g/data/vk83/experiments/inputs/access-om2/ice/initial_conditions/global.1deg/2020.05.30/monthly_sstsss.nc
ncpus: 24
Expand All @@ -81,7 +81,7 @@ collate:
mem: 30GB
ncpus: 4
queue: normal
exe: /g/data/vk83/apps/spack/0.20/release/linux-rocky8-x86_64/intel-19.0.5.281/mom5-git.2023.11.09=2023.11.09-64l5azdtcoxhrgb5ynn2vued5lmjvn33/bin/mppnccombine.spack
exe: /g/data/vk83/apps/spack/0.22/release/linux-rocky8-x86_64/intel-19.0.5.281/mom5-git.2024.06.27_2024.06.27-q6bpwu526xql2gm6dbpnvf36yvnfxynj/bin/mppnccombine.spack

manifest:
reproduce:
Expand Down
18 changes: 9 additions & 9 deletions manifests/exe.yaml
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Original file line number Diff line number Diff line change
Expand Up @@ -2,17 +2,17 @@ format: yamanifest
version: 1.0
---
work/atmosphere/yatm.exe:
fullpath: /g/data/vk83/apps/spack/0.20/release/linux-rocky8-x86_64/intel-19.0.5.281/libaccessom2-git.2023.10.26=2023.10.26-ltfg7jcn6t4cefotvj3kjnyu5nru26xo/bin/yatm.exe
fullpath: /g/data/vk83/apps/spack/0.22/release/linux-rocky8-x86_64/intel-19.0.5.281/libaccessom2-git.2023.10.26_2023.10.26-xarvbgn4yf4mxy5hxixm4gfbp7rbzsfh/bin/yatm.exe
hashes:
binhash: 4e8b4ef76e971c4af3b26cfac632e160
md5: 5baa1d417fe6708fc30cbeaa57d82f96
binhash: 4f968e4cf41d6e51cf3cd59bd070e393
md5: eccfeb3f49d620b4e5f6b8c2bc5d8c36
work/ice/cice_auscom_360x300_24x1_24p.exe:
fullpath: /g/data/vk83/apps/spack/0.20/release/linux-rocky8-x86_64/intel-19.0.5.281/cice5-git.2023.10.19=2023.10.19-v3zncpqjj2gyseudbwiudolcjq3k3leo/bin/cice_auscom_360x300_24x1_24p.exe
fullpath: /g/data/vk83/apps/spack/0.22/release/linux-rocky8-x86_64/intel-19.0.5.281/cice5-git.2023.10.19_2023.10.19-4tttbvaxg4afg3hjcrfaah6qngp43e5e/bin/cice_auscom_360x300_24x1_24p.exe
hashes:
binhash: 3a65f67d21152e77034da28c22a94c66
md5: 37866455b057c85c3ea50c0ef0ea840b
binhash: 6d1d90c6ba37b4dbbd3173fab98d32d1
md5: 1ee0b63f488f38619cba0000586bc0c4
work/ocean/fms_ACCESS-OM-BGC.x:
fullpath: /g/data/vk83/apps/spack/0.20/release/linux-rocky8-x86_64/intel-19.0.5.281/mom5-git.2023.11.09=2023.11.09-64l5azdtcoxhrgb5ynn2vued5lmjvn33/bin/fms_ACCESS-OM-BGC.x
fullpath: /g/data/vk83/apps/spack/0.22/release/linux-rocky8-x86_64/intel-19.0.5.281/mom5-git.2024.06.27_2024.06.27-q6bpwu526xql2gm6dbpnvf36yvnfxynj/bin/fms_ACCESS-OM-BGC.x
hashes:
binhash: 45352e33876da49ca042014a9f6686e5
md5: a909552e85690be692ad3ec94016181b
binhash: efb3edca9d546723c29f92f7c8eb1856
md5: 1297c30c1b945e55fa08acdeb301b3d0
14 changes: 7 additions & 7 deletions manifests/input.yaml
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Original file line number Diff line number Diff line change
Expand Up @@ -93,10 +93,10 @@ work/atmosphere/INPUT/rmp_jrar_to_cict_CONSERV.nc:
md5: 10f0b5ea6b8102a03ad1140e5163a0f7
work/ice/RESTART/grid.nc:
copy: true
fullpath: /g/data/vk83/experiments/inputs/access-om2/ice/grids/global.1deg/2020.05.30/grid.nc
fullpath: /g/data/vk83/experiments/inputs/access-om2/ice/grids/global.1deg/2024.04.17/grid.nc
hashes:
binhash: e7108317ae28b1f9ae77711728925cb6
md5: 1213e346055ee073fe33dc12578d99c6
binhash: 588f0b40bf750559434e425e7d039bca
md5: 7dd9ee5bce7f2eaeb75355684ddba599
work/ice/RESTART/i2o.nc:
copy: true
fullpath: /g/data/vk83/experiments/inputs/access-om2/ice/initial_conditions_biogeochemistry/global.1deg/2022.02.24/i2o.nc
Expand All @@ -105,10 +105,10 @@ work/ice/RESTART/i2o.nc:
md5: cc4cc9b60706470beddce59b600fef9f
work/ice/RESTART/kmt.nc:
copy: true
fullpath: /g/data/vk83/experiments/inputs/access-om2/ice/grids/global.1deg/2020.10.22/kmt.nc
fullpath: /g/data/vk83/experiments/inputs/access-om2/ice/grids/global.1deg/2024.04.17/kmt.nc
hashes:
binhash: 13a23d6d9331abc9d677c6fd466a4433
md5: 1f9806c646a620378e5257e480bc9df7
binhash: 2b659d429cbf9e12701709ff0185405f
md5: 9609d3db04f58cba200d7186dfe68ebd
work/ice/RESTART/monthly_sstsss.nc:
copy: true
fullpath: /g/data/vk83/experiments/inputs/access-om2/ice/initial_conditions/global.1deg/2020.05.30/monthly_sstsss.nc
Expand Down Expand Up @@ -155,7 +155,7 @@ work/ocean/INPUT/csiro_bgc.res.nc:
work/ocean/INPUT/csiro_bgc_sediment.res.nc:
fullpath: /g/data/vk83/experiments/inputs/access-om2/ocean/biogeochemistry/global.1deg/2022.02.24/csiro_bgc_sediment.res.nc
hashes:
binhash: 5dcf7a15477f488cd7d2f85a1d39a176
binhash: fff3375ad2ae36b7d0521dd67912a9fd
md5: 12488f7cf8f9c2f714c0ff2dbbb33a9b
work/ocean/INPUT/dust.nc:
fullpath: /g/data/vk83/experiments/inputs/access-om2/ocean/biogeochemistry/global.1deg/2022.02.24/dust.nc
Expand Down
2 changes: 1 addition & 1 deletion metadata.yaml
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Original file line number Diff line number Diff line change
Expand Up @@ -25,5 +25,5 @@ realm:
nominal_resolution: 100 km
reference: https://doi.org/10.5194/gmd-13-401-2020
model: access-om2
version: "2.0"
version: "3.0"
url: https://github.com/ACCESS-NRI/access-om2-configs/tree/release-1deg_jra55_ryf_bgc
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