Merge pull request #131 from ACCESS-NRI/dev-01deg_jra55_ryf_bgc

Update `01deg_jra55_ryf_bgc` for WOMBAT sea-ice coupling bug-fix and new CICE grid

config.yaml

@@ -28,15 +28,15 @@ input:
 submodels:
     - name: atmosphere
       model: yatm
-      exe: /g/data/vk83/apps/spack/0.20/release/linux-rocky8-x86_64/intel-19.0.5.281/libaccessom2-git.2023.10.26=2023.10.26-ltfg7jcn6t4cefotvj3kjnyu5nru26xo/bin/yatm.exe
+      exe: /g/data/vk83/apps/spack/0.22/release/linux-rocky8-x86_64/intel-19.0.5.281/libaccessom2-git.2023.10.26_2023.10.26-xarvbgn4yf4mxy5hxixm4gfbp7rbzsfh/bin/yatm.exe
       input:
             - /g/data/vk83/experiments/inputs/access-om2/remapping_weights/JRA55/global.01deg/2020.05.30/rmp_jrar_to_cict_CONSERV.nc
             - /g/data/vk83/experiments/inputs/JRA-55/RYF/v1-4/data
       ncpus: 1
 
     - name: ocean
       model: mom
-      exe: /g/data/vk83/apps/spack/0.20/release/linux-rocky8-x86_64/intel-19.0.5.281/mom5-git.2023.11.09=2023.11.09-64l5azdtcoxhrgb5ynn2vued5lmjvn33/bin/fms_ACCESS-OM-BGC.x
+      exe: /g/data/vk83/apps/spack/0.22/release/linux-rocky8-x86_64/intel-19.0.5.281/mom5-git.2024.06.27_2024.06.27-q6bpwu526xql2gm6dbpnvf36yvnfxynj/bin/fms_ACCESS-OM-BGC.x
       input: 
           - /g/data/vk83/experiments/inputs/access-om2/ocean/biogeochemistry/global.01deg/2022.02.24/bgc_param.nc
           - /g/data/vk83/experiments/inputs/access-om2/ocean/biogeochemistry/global.01deg/2022.02.24/co2_iaf.nc
@@ -61,10 +61,10 @@ submodels:
 
     - name: ice
       model: cice5
-      exe: /g/data/vk83/apps/spack/0.20/release/linux-rocky8-x86_64/intel-19.0.5.281/cice5-git.2023.10.19=2023.10.19-v3zncpqjj2gyseudbwiudolcjq3k3leo/bin/cice_auscom_3600x2700_90x90_722p.exe 
+      exe: /g/data/vk83/apps/spack/0.22/release/linux-rocky8-x86_64/intel-19.0.5.281/cice5-git.2023.10.19_2023.10.19-4tttbvaxg4afg3hjcrfaah6qngp43e5e/bin/cice_auscom_3600x2700_90x90_722p.exe
       input:
-        - /g/data/vk83/experiments/inputs/access-om2/ice/grids/global.01deg/2020.05.30/grid.nc
-        - /g/data/vk83/experiments/inputs/access-om2/ice/grids/global.01deg/2020.05.30/kmt.nc
+        - /g/data/vk83/experiments/inputs/access-om2/ice/grids/global.01deg/2024.04.17/grid.nc
+        - /g/data/vk83/experiments/inputs/access-om2/ice/grids/global.01deg/2024.04.17/kmt.nc
         - /g/data/vk83/experiments/inputs/access-om2/ice/initial_conditions_biogeochemistry/global.01deg/2022.02.24/o2i.nc
         - /g/data/vk83/experiments/inputs/access-om2/ice/initial_conditions_biogeochemistry/global.01deg/2022.02.24/i2o.nc
         - /g/data/vk83/experiments/inputs/access-om2/ice/initial_conditions/global.01deg/2020.05.30/u_star.nc

manifests/exe.yaml

@@ -2,17 +2,17 @@ format: yamanifest
 version: 1.0
 ---
 work/atmosphere/yatm.exe:
-  fullpath: /g/data/vk83/apps/spack/0.20/release/linux-rocky8-x86_64/intel-19.0.5.281/libaccessom2-git.2023.10.26=2023.10.26-ltfg7jcn6t4cefotvj3kjnyu5nru26xo/bin/yatm.exe
+  fullpath: /g/data/vk83/apps/spack/0.22/release/linux-rocky8-x86_64/intel-19.0.5.281/libaccessom2-git.2023.10.26_2023.10.26-xarvbgn4yf4mxy5hxixm4gfbp7rbzsfh/bin/yatm.exe
   hashes:
-    binhash: 4e8b4ef76e971c4af3b26cfac632e160
-    md5: 5baa1d417fe6708fc30cbeaa57d82f96
+    binhash: 4f968e4cf41d6e51cf3cd59bd070e393
+    md5: eccfeb3f49d620b4e5f6b8c2bc5d8c36
 work/ice/cice_auscom_3600x2700_90x90_722p.exe:
-  fullpath: /g/data/vk83/apps/spack/0.20/release/linux-rocky8-x86_64/intel-19.0.5.281/cice5-git.2023.10.19=2023.10.19-v3zncpqjj2gyseudbwiudolcjq3k3leo/bin/cice_auscom_3600x2700_90x90_722p.exe
+  fullpath: /g/data/vk83/apps/spack/0.22/release/linux-rocky8-x86_64/intel-19.0.5.281/cice5-git.2023.10.19_2023.10.19-4tttbvaxg4afg3hjcrfaah6qngp43e5e/bin/cice_auscom_3600x2700_90x90_722p.exe
   hashes:
-    binhash: 67dd37413d389fc240c8ca24e3337fba
-    md5: f2787a34fcedaedc63a979c260e1c82d
+    binhash: 867400f6e6f168218c25c7dbc2d1062e
+    md5: bec4ef9abc0eb0299e449e0c8b5c57e5
 work/ocean/fms_ACCESS-OM-BGC.x:
-  fullpath: /g/data/vk83/apps/spack/0.20/release/linux-rocky8-x86_64/intel-19.0.5.281/mom5-git.2023.11.09=2023.11.09-64l5azdtcoxhrgb5ynn2vued5lmjvn33/bin/fms_ACCESS-OM-BGC.x
+  fullpath: /g/data/vk83/apps/spack/0.22/release/linux-rocky8-x86_64/intel-19.0.5.281/mom5-git.2024.06.27_2024.06.27-q6bpwu526xql2gm6dbpnvf36yvnfxynj/bin/fms_ACCESS-OM-BGC.x
   hashes:
-    binhash: 45352e33876da49ca042014a9f6686e5
-    md5: a909552e85690be692ad3ec94016181b
+    binhash: efb3edca9d546723c29f92f7c8eb1856
+    md5: 1297c30c1b945e55fa08acdeb301b3d0

manifests/input.yaml

@@ -83,10 +83,10 @@ work/atmosphere/INPUT/rmp_jrar_to_cict_CONSERV.nc:
     md5: 08f3f762a1b005d4ba90f5ceef5ccc74
 work/ice/RESTART/grid.nc:
   copy: true
-  fullpath: /g/data/vk83/experiments/inputs/access-om2/ice/grids/global.01deg/2020.05.30/grid.nc
+  fullpath: /g/data/vk83/experiments/inputs/access-om2/ice/grids/global.01deg/2024.04.17/grid.nc
   hashes:
-    binhash: 6747a890dcea1c980c81835c74b80c08
-    md5: 189f572cf886440edd5ac6dab40df3d8
+    binhash: d71c0256388855eb6c2e7ab27997fdde
+    md5: ab3458bf0c16cc5e2e72f59b705de313
 work/ice/RESTART/i2o.nc:
   copy: true
   fullpath: /g/data/vk83/experiments/inputs/access-om2/ice/initial_conditions_biogeochemistry/global.01deg/2022.02.24/i2o.nc
@@ -95,10 +95,10 @@ work/ice/RESTART/i2o.nc:
     md5: c06055d70383aec3de3573b97f57c7fc
 work/ice/RESTART/kmt.nc:
   copy: true
-  fullpath: /g/data/vk83/experiments/inputs/access-om2/ice/grids/global.01deg/2020.05.30/kmt.nc
+  fullpath: /g/data/vk83/experiments/inputs/access-om2/ice/grids/global.01deg/2024.04.17/kmt.nc
   hashes:
-    binhash: edb45020ad070277a5773fe057c9f18c
-    md5: a46c01045f519b9002b10f82df6ad376
+    binhash: f17083b7d13413de60466ba220b05860
+    md5: 8c12f286b56ff171287753986e72d5cb
 work/ice/RESTART/monthly_sstsss.nc:
   copy: true
   fullpath: /g/data/vk83/experiments/inputs/access-om2/ice/initial_conditions/global.01deg/2020.05.30/monthly_sstsss.nc

metadata.yaml

@@ -17,7 +17,7 @@ keywords:
   - JRA55
   - repeat-year
   - access-om2-01
-version: "2.0"
+version: "3.0"
 realm:
   - ocean
   - seaIce