Update to latest pyproj for esmvaltool #142
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: Build and test conda env | |
| on: pull_request | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout repository | |
| ### Latest at time of writing | |
| uses: actions/[email protected] | |
| - name: Sync repository to Gadi | |
| ### Latest at time of writing | |
| uses: up9cloud/[email protected] | |
| env: | |
| HOST: gadi.nci.org.au | |
| TARGET: ${{secrets.GADI_REPO_PATH}} | |
| KEY: ${{secrets.DEPLOY_KEY}} | |
| USER: ${{secrets.GADI_USER}} | |
| - name: Create Admin dirs on Gadi | |
| uses: appleboy/[email protected] | |
| with: | |
| host: gadi.nci.org.au | |
| username: ${{secrets.GADI_USER}} | |
| key: ${{secrets.DEPLOY_KEY}} | |
| script: | | |
| source ${{secrets.GADI_REPO_PATH}}/scripts/install_config.sh | |
| source ${{secrets.GADI_REPO_PATH}}/scripts/functions.sh | |
| mkdir -p $ADMIN_DIR $JOB_LOG_DIR $BUILD_STAGE_DIR | |
| set_admin_perms $ADMIN_DIR $JOB_LOG_DIR $BUILD_STAGE_DIR | |
| - name: Build environment | |
| uses: appleboy/[email protected] | |
| with: | |
| host: gadi.nci.org.au | |
| username: ${{secrets.GADI_USER}} | |
| key: ${{secrets.DEPLOY_KEY}} | |
| command_timeout: 120m | |
| script: | | |
| export SCRIPT_DIR=${{secrets.GADI_REPO_PATH}}/scripts | |
| eval $( grep ADMIN_DIR $SCRIPT_DIR/install_config.sh ) | |
| eval $( grep JOB_LOG_DIR $SCRIPT_DIR/install_config.sh ) | |
| cd $JOB_LOG_DIR | |
| qsub -N build_conda -lncpus=1,mem=20GB,walltime=2:00:00,jobfs=50GB,storage=gdata/xp65 -v SCRIPT_DIR -P iq82 -q copyq -Wblock=true -Wumask=037 "${SCRIPT_DIR}"/build.sh | |
| test: | |
| needs: build | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Test environment | |
| uses: appleboy/[email protected] | |
| with: | |
| host: gadi.nci.org.au | |
| username: ${{secrets.GADI_USER}} | |
| key: ${{secrets.DEPLOY_KEY}} | |
| script: | | |
| export SCRIPT_DIR=${{secrets.GADI_REPO_PATH}}/scripts | |
| eval $( grep ADMIN_DIR $SCRIPT_DIR/install_config.sh ) | |
| eval $( grep JOB_LOG_DIR $SCRIPT_DIR/install_config.sh ) | |
| cd $JOB_LOG_DIR | |
| qsub -N test_conda -lncpus=4,mem=20GB,walltime=0:20:00,jobfs=50GB,storage=gdata/xp65 -v SCRIPT_DIR -P iq82 -Wblock=true -Wumask=037 "${SCRIPT_DIR}"/test.sh |