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Error from example dataset #8

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khchuang opened this issue Sep 20, 2024 · 0 comments
Open

Error from example dataset #8

khchuang opened this issue Sep 20, 2024 · 0 comments

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@khchuang
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I tried the example mouse brain T2WI, but got the following errors:

========= Species =========
rodent
========= New orientation =========
RIA

0it [00:00, ?it/s]Processing: POLYIC_20190510_mouse30__E2_P1
0it [00:00, ?it/s]
Traceback (most recent call last):
File "BEN_infer.py", line 48, in
logs_folder = make_result_to_logs(input_folder=args.input, predict_folder=args.output, orientation=args.check_orientation)
File "/home/kai/BEN/utils/check_result.py", line 190, in make_result_to_logs
plot_segmentation_montage(_raw=reoriented_img_array, _pred=reoriented_pred_array, save_name=save_name)
File "/home/kai/BEN/utils/check_result.py", line 89, in plot_segmentation_montage
_pred = _pred[slice_id]
IndexError: index 67 is out of bounds for axis 0 with size 56

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