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================================================================================
This file describes what tags were created and why
================================================================================
Originator: muszala
Date: 26 Feb 2015
Model: clm-ed
Version: ed_v010_21_clm4_5_1_r097
One-line: update scripts
branch off of Charlie Koven scripts so I can add a cold deciduous test mod
================================================================================
Originator: muszala
Date: 26 Feb 2015
Model: clm-ed
Version: ed_v010_20_clm4_5_1_r097
One-line: fix issues found after merging up to 097 and merge in bug fix branch-tags
- make sure no ed files are execuabtles
- make pio branch tag that allows things to run with -O0 -g
- resolve differences between older ed0.1.0 versions of EDRestVectorMod and this
tag
- remove extra accumul call for ED_GDD0
- merge in changes from https://svn-ccsm-models.cgd.ucar.edu/clm2/branches/edPtBugFixes
https://svn-ccsm-models.cgd.ucar.edu/clm2/branch_tags/edPtBugFixes_tags
This test now runs. It has not been running previously
>>more TestStatus
PASS ERS_D_Mmpi-serial.1x1_brazil.ICLM45CNED.yellowstone_intel.clm-edTest
PASS ERS_D_Mmpi-serial.1x1_brazil.ICLM45CNED.yellowstone_intel.clm-edTest.memleak
M .
M models/lnd/clm
M models/lnd/clm/src/biogeochem/CNWoodProductsMod.F90
M models/lnd/clm/src/main/clm_varcon.F90
M models/lnd/clm/src/main/clm_initializeMod.F90
M models/lnd/clm/src/main/histFileMod.F90
M models/lnd/clm/src/main/controlMod.F90
M models/lnd/clm/src/main/clm_driver.F90
M models/lnd/clm/src/main/surfrdMod.F90
M models/lnd/clm/src/main/clm_instMod.F90
M models/lnd/clm/src/ED/biogeochem/EDPhenologyType.F90
M models/lnd/clm/src/ED/biogeochem/EDPhysiologyMod.F90
M models/lnd/clm/src/ED/main/EDRestVectorMod.F90
M models/lnd/clm/src/ED/main/EDMainMod.F90
M models/lnd/clm/src/biogeophys/SoilTemperatureMod.F90
M models/lnd/clm/src/biogeophys/TemperatureType.F90
M models/lnd/clm/src/biogeophys/HumanIndexMod.F90
M models/lnd/clm/src/biogeophys/BareGroundFluxesMod.F90
M models/lnd/clm/src/biogeophys/CanopyFluxesMod.F90
M SVN_EXTERNAL_DIRECTORIES
M .ChangeLogED
================================================================================
Originator: muszala
Date: 25 Feb 2015
Model: clm-ed
Version: ed_v010_19_clm4_5_1_r097
One-line: complete merge up to clm 097
Resolve differences in the 097 branch and trunk-tag. Testing OK against CLM 097.
Two ED compset test have different values in the h0 file. Otherwise, test failures
are identical to those found in clm4_5_1_r097 testing. These are expected as ED work
has diverged from CLM implementations.
FAIL SMS.f10_f10.ICLM45CNED.yellowstone_intel.clm-edTest.compare_hist.clm4_5_1_r097spm
FAIL SMS.f19_g16.ICLM45CNED.yellowstone_intel.clm-edTest.compare_hist.clm4_5_1_r097spm
M models/lnd/clm/doc/ChangeLog
M models/lnd/clm/doc/ChangeSum
M models/lnd/clm/src/utils/domainMod.F90
M models/lnd/clm/src/main/PatchType.F90
M models/lnd/clm/src/main/CMakeLists.txt
M models/lnd/clm/src/main/clm_driver.F90
M models/lnd/clm/src/ED/main/EDCLMLinkMod.F90
M models/lnd/clm/src/ED/main/EDRestVectorMod.F90
M models/lnd/clm/src/ED/main/EDMainMod.F90
M models/lnd/clm/src/ED/main/CMakeLists.txt
M models/lnd/clm/src/ED/biogeophys/EDSurfaceAlbedoMod.F90
M models/lnd/clm/src/biogeophys/TemperatureType.F90
M models/lnd/clm/src/biogeophys/test/Irrigation_test/IrrigationWrapperMod.F90
M models/lnd/clm/src/biogeophys/test/Irrigation_test/test_irrigation_singlepatch.pf
M models/lnd/clm/src/unit_test_shr/unittestSubgridMod.F90
M models/lnd/clm/src/CMakeLists.txt
M SVN_EXTERNAL_DIRECTORIES
M ChangeLog
M ChangeSum
================================================================================
Originator: muszala
Date: 23 Feb 2015
Model: clm-ed
Version: ed_v010_19_clm4_5_1_r096
One-line: complete merge up to clm 096
While we've already merged up to 097 in a branch, there are portions of the
095->096 merge that are missing. Small step before doing the 'official'
merge from 096->097.
M .
M .ChangeLogED
M ChangeLog
M ChangeSum
M SVN_EXTERNAL_DIRECTORIES
================================================================================
Originator: [email protected]
Date: 10 Jan 2015
Model: clm-ed
Version: ed_v010_19_clm4_5_1_r095
One-line: incomplete merge up to clm 096
Merge from 095 to 096. Externals, ChangeLog and ChangeSum left out for some
reason
================================================================================
Originator: muszala
Date: 19 Nov 2014
Model: clm-ed
Version: ed_v010_18_clm4_5_1_r095
One-line: merge in mvertens refactor.
This has been merged in from a branch-tag from mvertens and not from the offical
clm trunk-tag. That trunk-tag, when it is made, will be merged in at a later date
with a proper clm ChangeLog entry.
This tag has been minimally tested for ED compsets and will be followed by updates to
clm 096 and 097 with full testing.
M models/lnd/clm/bld/configure
M models/lnd/clm/doc/ChangeLog
M models/lnd/clm/src/utils/domainMod.F90
M models/lnd/clm/src/utils/accumulMod.F90
D models/lnd/clm/src/biogeochem/CNDecompCascadeConType.F90
D models/lnd/clm/src/biogeochem/CNNitrifDenitrifMod.F90
D models/lnd/clm/src/biogeochem/CNNitrogenFluxType.F90
D models/lnd/clm/src/biogeochem/CNVerticalProfileMod.F90
D models/lnd/clm/src/biogeochem/CNCarbonFluxType.F90
D models/lnd/clm/src/biogeochem/CNCarbonStateType.F90
D models/lnd/clm/src/biogeochem/CNDecompMod.F90
D models/lnd/clm/src/biogeochem/CNStateType.F90
D models/lnd/clm/src/biogeochem/CNAllocationMod.F90
D models/lnd/clm/src/biogeochem/CNEcosystemDynMod.F90
D models/lnd/clm/src/biogeochem/CNDecompCascadeBGCMod.F90
D models/lnd/clm/src/biogeochem/CNNitrogenStateType.F90
D models/lnd/clm/src/biogeochem/CNDecompCascadeCNMod.F90
D models/lnd/clm/src/biogeochem/CNSoilLittVertTranspMod.F90
A models/lnd/clm/src/biogeochem/CNVegCarbonFluxType.F90
M models/lnd/clm/src/biogeochem/CNCStateUpdate2Mod.F90
A models/lnd/clm/src/biogeochem/CNVegCarbonStateType.F90
M models/lnd/clm/src/biogeochem/CNGapMortalityMod.F90
M models/lnd/clm/src/biogeochem/CNGRespMod.F90
M models/lnd/clm/src/biogeochem/CNNStateUpdate1Mod.F90
M models/lnd/clm/src/biogeochem/CNBalanceCheckMod.F90
A models/lnd/clm/src/biogeochem/CNVegStateType.F90
M models/lnd/clm/src/biogeochem/CNNStateUpdate3Mod.F90
M models/lnd/clm/src/biogeochem/CNDVDriverMod.F90
M models/lnd/clm/src/biogeochem/CNFireMod.F90
M models/lnd/clm/src/biogeochem/CNMRespMod.F90
M models/lnd/clm/src/biogeochem/MEGANFactorsMod.F90
A models/lnd/clm/src/biogeochem/CNVegNitrogenStateType.F90
M models/lnd/clm/src/biogeochem/SatellitePhenologyMod.F90
M models/lnd/clm/src/biogeochem/CNCIsoFluxMod.F90
M models/lnd/clm/src/biogeochem/CNPrecisionControlMod.F90
M models/lnd/clm/src/biogeochem/CNWoodProductsMod.F90
M models/lnd/clm/src/biogeochem/ch4Mod.F90
M models/lnd/clm/src/biogeochem/DUSTMod.F90
M models/lnd/clm/src/biogeochem/CNDVLightMod.F90
M models/lnd/clm/src/biogeochem/NutrientCompetitionMethodMod.F90
M models/lnd/clm/src/biogeochem/CNPhenologyMod.F90
M models/lnd/clm/src/biogeochem/ch4varcon.F90
M models/lnd/clm/src/biogeochem/CNCStateUpdate1Mod.F90
M models/lnd/clm/src/biogeochem/CNCStateUpdate3Mod.F90
M models/lnd/clm/src/biogeochem/CNSharedParamsMod.F90
M models/lnd/clm/src/biogeochem/CNDVType.F90
M models/lnd/clm/src/biogeochem/NutrientCompetitionCLM45defaultMod.F90
M models/lnd/clm/src/biogeochem/VOCEmissionMod.F90
M models/lnd/clm/src/biogeochem/CNAnnualUpdateMod.F90
A models/lnd/clm/src/biogeochem/C14BompbSpikeMod.F90
M models/lnd/clm/src/biogeochem/CNNStateUpdate2Mod.F90
M models/lnd/clm/src/biogeochem/CropType.F90
M models/lnd/clm/src/biogeochem/CNNDynamicsMod.F90
M models/lnd/clm/src/biogeochem/DryDepVelocity.F90
A models/lnd/clm/src/biogeochem/CNVegNitrogenFluxType.F90
M models/lnd/clm/src/biogeochem/CNVegStructUpdateMod.F90
A models/lnd/clm/src/biogeochem/CNDriverMod.F90
M models/lnd/clm/src/biogeochem/CNDVEstablishmentMod.F90
M models/lnd/clm/src/biogeochem/CNC14DecayMod.F90
D models/lnd/clm/src/main/EcophysConType.F90
D models/lnd/clm/src/main/pftvarcon.F90
M models/lnd/clm/src/main/clm_varcon.F90
M models/lnd/clm/src/main/initInterp.F90
M models/lnd/clm/src/main/clm_varpar.F90
M models/lnd/clm/src/main/landunit_varcon.F90
M models/lnd/clm/src/main/accumulMod.F90
M models/lnd/clm/src/main/subgridWeightsMod.F90
M models/lnd/clm/src/main/decompInitMod.F90
MM models/lnd/clm/src/main/clm_initializeMod.F90
M models/lnd/clm/src/main/subgridRestMod.F90
M models/lnd/clm/src/main/ColumnType.F90
M models/lnd/clm/src/main/subgridMod.F90
M models/lnd/clm/src/main/PatchType.F90
M models/lnd/clm/src/main/ndepStreamMod.F90
M models/lnd/clm/src/main/lnd2atmType.F90
M models/lnd/clm/src/main/atm2lndType.F90
M models/lnd/clm/src/main/histFileMod.F90
M models/lnd/clm/src/main/restFileMod.F90
M models/lnd/clm/src/main/clm_varsur.F90
M models/lnd/clm/src/main/LandunitType.F90
M models/lnd/clm/src/main/GetGlobalValuesMod.F90
MM models/lnd/clm/src/main/controlMod.F90
M models/lnd/clm/src/main/initSubgridMod.F90
M models/lnd/clm/src/main/filterMod.F90
M models/lnd/clm/src/main/lnd2glcMod.F90
M models/lnd/clm/src/main/clm_driver.F90
M models/lnd/clm/src/main/clm_varctl.F90
A models/lnd/clm/src/main/pftconMod.F90
M models/lnd/clm/src/main/subgridAveMod.F90
M models/lnd/clm/src/main/initGridCellsMod.F90
M models/lnd/clm/src/main/atm2lndMod.F90
M models/lnd/clm/src/main/lnd2atmMod.F90
M models/lnd/clm/src/main/ncdio_pio.F90
M models/lnd/clm/src/main/surfrdMod.F90
M models/lnd/clm/src/main/decompMod.F90
A models/lnd/clm/src/main/clm_instMod.F90
M models/lnd/clm/src/main/reweightMod.F90
M models/lnd/clm/src/main/readParamsMod.F90
M models/lnd/clm/src/ED/biogeochem/EDCanopyStructureMod.F90
A models/lnd/clm/src/ED/biogeochem/EDSharedParamsMod.F90
M models/lnd/clm/src/ED/biogeochem/EDGrowthFunctionsMod.F90
M models/lnd/clm/src/ED/biogeochem/EDCohortDynamicsMod.F90
A models/lnd/clm/src/ED/biogeochem/EDPhenologyType.F90
M models/lnd/clm/src/ED/biogeochem/EDPhysiologyMod.F90
M models/lnd/clm/src/ED/biogeochem/EDPatchDynamicsMod.F90
D models/lnd/clm/src/ED/main/EDBioType.F90
D models/lnd/clm/src/ED/main/EDVecPatchType.F90
M models/lnd/clm/src/ED/main/EDCLMLinkMod.F90
M models/lnd/clm/src/ED/main/EDVecCohortType.F90
M models/lnd/clm/src/ED/main/EDRestVectorMod.F90
M models/lnd/clm/src/ED/main/EDInitMod.F90
M models/lnd/clm/src/ED/main/EDMainMod.F90
M models/lnd/clm/src/ED/main/EDTypesMod.F90
M models/lnd/clm/src/ED/main/CMakeLists.txt
M models/lnd/clm/src/ED/fire/SFMainMod.F90
D models/lnd/clm/src/ED/biogeophys/EDPhenologyMod.F90
M models/lnd/clm/src/ED/biogeophys/EDAccumulateFluxesMod.F90
M models/lnd/clm/src/ED/biogeophys/EDSurfaceAlbedoMod.F90
M models/lnd/clm/src/ED/biogeophys/EDPhotosynthesisMod.F90
M models/lnd/clm/src/ED/biogeophys/EDBtranMod.F90
D models/lnd/clm/src/biogeophys/FrictionVelocityType.F90
D models/lnd/clm/src/biogeophys/AerosolType.F90
D models/lnd/clm/src/biogeophys/PhotosynthesisType.F90
M models/lnd/clm/src/biogeophys/BalanceCheckMod.F90
M models/lnd/clm/src/biogeophys/WaterfluxType.F90
MM models/lnd/clm/src/biogeophys/SoilTemperatureMod.F90
M models/lnd/clm/src/biogeophys/SnowSnicarMod.F90
M models/lnd/clm/src/biogeophys/SnowHydrologyMod.F90
M models/lnd/clm/src/biogeophys/LakeTemperatureMod.F90
M models/lnd/clm/src/biogeophys/FrictionVelocityMod.F90
M models/lnd/clm/src/biogeophys/SoilFluxesMod.F90
M models/lnd/clm/src/biogeophys/TemperatureType.F90
MM models/lnd/clm/src/biogeophys/HumanIndexMod.F90
M models/lnd/clm/src/biogeophys/PhotosynthesisMod.F90
M models/lnd/clm/src/biogeophys/LakeFluxesMod.F90
M models/lnd/clm/src/biogeophys/AerosolMod.F90
M models/lnd/clm/src/biogeophys/ActiveLayerMod.F90
M models/lnd/clm/src/biogeophys/SurfaceResistanceMod.F90
M models/lnd/clm/src/biogeophys/SoilStateType.F90
M models/lnd/clm/src/biogeophys/SoilHydrologyType.F90
M models/lnd/clm/src/biogeophys/HydrologyDrainageMod.F90
M models/lnd/clm/src/biogeophys/UrbanAlbedoMod.F90
MM models/lnd/clm/src/biogeophys/BareGroundFluxesMod.F90
MM models/lnd/clm/src/biogeophys/CanopyFluxesMod.F90
A models/lnd/clm/src/biogeophys/SoilStateInitTimeConstMod.F90
M models/lnd/clm/src/biogeophys/RootBiophysMod.F90
A models/lnd/clm/src/biogeophys/SoilHydrologyInitTimeConstMod.F90
M models/lnd/clm/src/biogeophys/SurfaceRadiationMod.F90
M models/lnd/clm/src/biogeophys/SoilWaterMovementMod.F90
M models/lnd/clm/src/biogeophys/SoilMoistStressMod.F90
M models/lnd/clm/src/biogeophys/UrbBuildTempOleson2015Mod.F90
M models/lnd/clm/src/biogeophys/CanopyHydrologyMod.F90
M models/lnd/clm/src/biogeophys/EnergyFluxType.F90
M models/lnd/clm/src/biogeophys/CanopyStateType.F90
M models/lnd/clm/src/biogeophys/UrbanFluxesMod.F90
M models/lnd/clm/src/biogeophys/SurfaceAlbedoMod.F90
M models/lnd/clm/src/biogeophys/UrbanRadiationMod.F90
M models/lnd/clm/src/biogeophys/SoilHydrologyMod.F90
M models/lnd/clm/src/biogeophys/IrrigationMod.F90
M models/lnd/clm/src/biogeophys/CanopyTemperatureMod.F90
M models/lnd/clm/src/biogeophys/HydrologyNoDrainageMod.F90
M models/lnd/clm/src/biogeophys/LakeHydrologyMod.F90
M models/lnd/clm/src/biogeophys/UrbanParamsType.F90
A models/lnd/clm/src/soilbiogeochem/SoilBiogeochemDecompCascadeConType.F90
A models/lnd/clm/src/soilbiogeochem/SoilBiogeochemNitrifDenitrifMod.F90
A models/lnd/clm/src/soilbiogeochem/SoilBiogeochemStateType.F90
A models/lnd/clm/src/soilbiogeochem/SoilBiogeochemNStateUpdate1Mod.F90
A models/lnd/clm/src/soilbiogeochem/SoilBiogeochemNitrogenFluxType.F90
A models/lnd/clm/src/soilbiogeochem/SoilBiogeochemDecompCascadeBGCMod.F90
A models/lnd/clm/src/soilbiogeochem/SoilBiogeochemNLeachingMod.F90
A models/lnd/clm/src/soilbiogeochem/SoilBiogeochemNitrogenStateType.F90
A models/lnd/clm/src/soilbiogeochem/SoilBiogeochemVerticalProfileMod.F90
A models/lnd/clm/src/soilbiogeochem/SoilBiogeochemCompetitionMod.F90
A models/lnd/clm/src/soilbiogeochem/SoilBiogeochemDecompCascadeCNMod.F90
A models/lnd/clm/src/soilbiogeochem/SoilBiogeochemPrecisionControlMod.F90
A models/lnd/clm/src/soilbiogeochem/SoilBiogeochemNitrogenUptakeMod.F90
A models/lnd/clm/src/soilbiogeochem/SoilBiogeochemPotentialMod.F90
A models/lnd/clm/src/soilbiogeochem/SoilBiogeochemCarbonFluxType.F90
A models/lnd/clm/src/soilbiogeochem/SoilBiogeochemLittVertTranspMod.F90
A models/lnd/clm/src/soilbiogeochem/SoilBiogeochemDecompMod.F90
A models/lnd/clm/src/soilbiogeochem/SoilBiogeochemCarbonStateType.F90
A models/lnd/clm/src/soilbiogeochem
M models/lnd/clm/src/dyn_subgrid/dynLandunitAreaMod.F90
M models/lnd/clm/src/dyn_subgrid/dynTimeInfoMod.F90
M models/lnd/clm/src/dyn_subgrid/dynSubgridDriverMod.F90
M models/lnd/clm/src/dyn_subgrid/dynHarvestMod.F90
M models/lnd/clm/src/dyn_subgrid/dynFileMod.F90
M models/lnd/clm/src/dyn_subgrid/dynConsBiogeochemMod.F90
M models/lnd/clm/src/dyn_subgrid/dynPriorWeightsMod.F90
M models/lnd/clm/src/dyn_subgrid/dynEDMod.F90
M models/lnd/clm/src/dyn_subgrid/dynVarMod.F90
M models/lnd/clm/src/dyn_subgrid/dynpftFileMod.F90
M models/lnd/clm/src/dyn_subgrid/dynVarTimeInterpMod.F90
M models/lnd/clm/src/dyn_subgrid/dynCNDVMod.F90
M models/lnd/clm/src/dyn_subgrid/dynConsBiogeophysMod.F90
M models/lnd/clm/src/dyn_subgrid/dynVarMod.F90.in
M models/lnd/clm/src/dyn_subgrid/dynVarTimeInterpMod.F90.in
M models/lnd/clm/src/dyn_subgrid/dynInitColumnsMod.F90
M models/lnd/clm/src/unit_test_shr/unittestSubgridMod.F90
M models/lnd/clm/src/CMakeLists.txt
M models/lnd/clm/src/cpl/lnd_comp_esmf.F90
M models/lnd/clm/src/cpl/lnd_import_export.F90
M models/lnd/clm/src/cpl/lnd_comp_mct.F90
M SVN_EXTERNAL_DIRECTORIES
M ChangeLog
================================================================================
Originator: muszala
Date: 18 Nov 2014
Model: clm-ed
Version: ed_v010_17_clm4_5_1_r095
One-line: fix typos in .ChangeLogED
M .ChangeLogED
================================================================================
Originator: muszala
Date: 18 Nov 2014
Model: clm-ed
Version: ed_v010_16_clm4_5_1_r095
One-line: merge up to clm4_5_1_r095
Merge from clm 092 to 095
M .ChangeLogED
M ChangeLog
M ChangeSum
M SVN_EXTERNAL_DIRECTORIES
M models/lnd/clm/bld/CLMBuildNamelist.pm
M models/lnd/clm/bld/clm.buildnml.csh
M models/lnd/clm/bld/listDefaultNamelist.pl
M models/lnd/clm/bld/namelist_files/namelist_defaults.xsl
M models/lnd/clm/bld/namelist_files/namelist_defaults_clm4_0.xml
M models/lnd/clm/bld/namelist_files/namelist_defaults_clm4_5.xml
M models/lnd/clm/bld/namelist_files/namelist_defaults_overall.xml
M models/lnd/clm/bld/namelist_files/namelist_definition_clm4_0.xml
M models/lnd/clm/bld/namelist_files/namelist_definition_clm4_5.xml
M models/lnd/clm/bld/test_build_namelist/t/input/namelist_defaults_clm4_5_test.xml
M models/lnd/clm/bld/test_build_namelist/t/input/namelist_definition_clm4_5_test.xml
M models/lnd/clm/bld/unit_testers/build-namelist_test.pl
M models/lnd/clm/bld/unit_testers/xFail/expectedClmTestFails.xml
M models/lnd/clm/bld/user_nl_clm
M models/lnd/clm/doc/ChangeLog
M models/lnd/clm/doc/ChangeSum
M models/lnd/clm/doc/UsersGuide/custom.xml
M models/lnd/clm/src/biogeochem/CNAllocationMod.F90
M models/lnd/clm/src/biogeochem/CNDecompMod.F90
M models/lnd/clm/src/biogeochem/CNEcosystemDynMod.F90
M models/lnd/clm/src/biogeochem/CropType.F90
A + models/lnd/clm/src/biogeochem/NutrientCompetitionCLM45defaultMod.F90
A + models/lnd/clm/src/biogeochem/NutrientCompetitionFactoryMod.F90
A + models/lnd/clm/src/biogeochem/NutrientCompetitionMethodMod.F90
M models/lnd/clm/src/biogeophys/SoilWaterMovementMod.F90
M models/lnd/clm/src/main/clm_driver.F90
MM models/lnd/clm/src/main/clm_initializeMod.F90
M models/lnd/clm/src/main/clm_varctl.F90
MM models/lnd/clm/src/main/controlMod.F90
M models/lnd/clm/src/main/readParamsMod.F90
M models/lnd/clm/src/main/subgridAveMod.F90
M models/lnd/clm/src_clm40/main/clm_varctl.F90
M models/lnd/clm/src_clm40/main/controlMod.F90
================================================================================
Originator: rosief
Date: 5 Nov 2014
Model: clm-ed
Version: ed_v010_15_clm4_5_1_r092
One-line: fix bug in ED_GDD0 handling
We had wrongly fixed the ED_GDD issue, by ignoring the fact that it was also being
accumulated in EDPhenology. Also, in EDPhenology, there was a bug with switched
round 'day' and 'month' arguments, so that month was almost always >7
and thus the accumulation was too often zeroed (meaning no leaf-on)
M models/lnd/clm/src/ED/main/EDBioType.F90
M models/lnd/clm/src/ED/main/EDCLMLinkMod.F90
M models/lnd/clm/src/biogeophys/TemperatureType.F90
================================================================================
Originator: muszala
Date: 5 Nov 2014
Model: clm-ed
Version: ed_v010_15_clm4_5_1_r092
One-line: fix bug in ED_GDD0 handling
There was a problem in TemperatureType.F90 in which ED_GDD0 was
not being accumulated. On writing the restart file for ED, this
field was sometimes causing the simulation to crash. To fix,
ED_GDD0 accumulate code was brought back into TemperatureType as
was phen_cd_status.
M models/lnd/clm/src/ED/main/EDBioType.F90
M models/lnd/clm/src/ED/main/EDCLMLinkMod.F90
M models/lnd/clm/src/ED/main/EDRestVectorMod.F90
M models/lnd/clm/src/biogeophys/TemperatureType.F90
M models/lnd/clm/src/main/clm_driver.F90
================================================================================
Originator: muszala
Date: 4 Nov 2014
Model: clm-ed
Version: ed_v010_14_clm4_5_1_r092
One-line: merge up to clm4_5_1_r092
M .ChangeLogED
M ChangeLog
M ChangeSum
M SVN_EXTERNAL_DIRECTORIES
M models/lnd/clm/bld/unit_testers/xFail/expectedClmTestFails.xml
M models/lnd/clm/doc/ChangeLog
M models/lnd/clm/doc/ChangeSum
M models/lnd/clm/src/biogeophys/FrictionVelocityMod.F90
A + models/lnd/clm/src/main/dtypes.h
M models/lnd/clm/src/main/ncdio_pio.F90
M models/lnd/clm/src/main/ncdio_pio.F90.in
M models/lnd/clm/src_clm40/biogeophys/FrictionVelocityMod.F90
M models/lnd/clm/src_clm40/main/ncdio_pio.F90
M models/lnd/clm/src_clm40/main/ncdio_pio.F90.in
================================================================================
Originator: muszala
Date: 4 Nov 2014
Model: clm-ed
Version: ed_v010_14_clm4_5_1_r091
One-line: reverting .ChangeLogED
Trying to fiddle with the ChangeLog, but that might have stopped emails from
going out when a tag was made...reverting.
M .ChangeLogED
================================================================================
Originator: muszala
Date: 3 Nov 2014
Model: clm-ed
Version: ed_v010_13_clm4_5_1_r091
One-line: merge up to clm4_5_1_r091
This merge from CLM address valgrind errors in CLM and RTM.
M models/lnd/clm/bld/unit_testers/xFail/expectedClmTestFails.xml
M models/lnd/clm/doc/ChangeLog
M models/lnd/clm/doc/ChangeSum
M models/lnd/clm/src/biogeochem/VOCEmissionMod.F90
M models/lnd/clm/src/main/histFileMod.F90
M models/lnd/clm/src/main/ncdio_pio.F90
M models/lnd/clm/src/main/ncdio_pio.F90.in
M SVN_EXTERNAL_DIRECTORIES
M ChangeLog
M ChangeSum
================================================================================
Originator: muszala
Date: 3 Nov 2014
Model: clm-ed
Version: ed_v010_13_clm4_5_1_r090
One-line: bring in mods from R. Fisher before merging up to clm4_5_1_r091
M models/lnd/clm/src/ED/main/EDCLMLinkMod.F90
-- add some write statements
M models/lnd/clm/src/ED/biogeophys/EDSurfaceAlbedoMod.F90
-- change chil handling
- chil = 0.01_r8
+ chil(p) = 0.01_r8
================================================================================
Originator: muszala
Date: 16 Oct 2014
Model: clm-ed
Version: ed_v010_12_clm4_5_1_r090
One-line: merge from clm4_5_1_r086 to clm4_5_1_r090
M .ChangeLog_template
M models/lnd/clm/test/tools/input_tests_master
M models/lnd/clm/test/tools/tests_posttag_yong
M models/lnd/clm/test/tools/test_driver.sh
M models/lnd/clm/test/tools/tests_posttag_nompi_regression
M models/lnd/clm/test/tools/tests_pretag_yellowstone_nompi
D models/lnd/clm/tools/clm4_5/interpinic
D models/lnd/clm/tools/clm4_5/interpinic/interpinic.runoptions
D models/lnd/clm/tools/clm4_5/interpinic/clmi.I2000CLM45BGC.2000-01-01.10x15_simyr2000_c131104.nc
D models/lnd/clm/tools/clm4_5/interpinic/src
D models/lnd/clm/tools/clm4_5/interpinic/src/interpinic.F90
D models/lnd/clm/tools/clm4_5/interpinic/src/shr_infnan_mod.F90
D models/lnd/clm/tools/clm4_5/interpinic/src/Makefile.common
D models/lnd/clm/tools/clm4_5/interpinic/src/shr_isnan.c
D models/lnd/clm/tools/clm4_5/interpinic/src/shr_sys_mod.F90
D models/lnd/clm/tools/clm4_5/interpinic/src/fmain.F90
D models/lnd/clm/tools/clm4_5/interpinic/src/shr_log_mod.F90
D models/lnd/clm/tools/clm4_5/interpinic/src/Mkdepends
D models/lnd/clm/tools/clm4_5/interpinic/src/Srcfiles
D models/lnd/clm/tools/clm4_5/interpinic/src/shr_isnan.h
D models/lnd/clm/tools/clm4_5/interpinic/src/Filepath
D models/lnd/clm/tools/clm4_5/interpinic/src/Makefile
D models/lnd/clm/tools/clm4_5/interpinic/src/shr_kind_mod.F90
D models/lnd/clm/tools/clm4_5/interpinic/src/shr_const_mod.F90
D models/lnd/clm/tools/clm4_5/interpinic/addmetadata
D models/lnd/clm/tools/clm4_5/interpinic/README
M models/lnd/clm/tools/SVN_EXTERNAL_DIRECTORIES
D models/lnd/clm/tools/shared/mkmapgrids/src
D models/lnd/clm/tools/shared/mkmapgrids/src/Makefile.common
D models/lnd/clm/tools/shared/mkmapgrids/src/domainMod.F90
D models/lnd/clm/tools/shared/mkmapgrids/src/shr_sys_mod.F90
D models/lnd/clm/tools/shared/mkmapgrids/src/shr_file_mod.F90
D models/lnd/clm/tools/shared/mkmapgrids/src/nanMod.F90
D models/lnd/clm/tools/shared/mkmapgrids/src/shr_log_mod.F90
D models/lnd/clm/tools/shared/mkmapgrids/src/Mkdepends
D models/lnd/clm/tools/shared/mkmapgrids/src/Srcfiles
D models/lnd/clm/tools/shared/mkmapgrids/src/mkmapgrids.F90
D models/lnd/clm/tools/shared/mkmapgrids/src/Filepath
D models/lnd/clm/tools/shared/mkmapgrids/src/Makefile
D models/lnd/clm/tools/shared/mkmapgrids/src/shr_kind_mod.F90
D models/lnd/clm/tools/shared/mkmapgrids/mkmapgrids.namelist
D models/lnd/clm/tools/shared/mkmapgrids/mkmapgrids.csh
M models/lnd/clm/tools/shared/mkmapgrids/README
M models/lnd/clm/tools/README
M models/lnd/clm/tools
M models/lnd/clm/bld/configure
M models/lnd/clm/bld/unit_testers/xFail/expectedClmTestFails.xml
M models/lnd/clm/bld/namelist_files/namelist_defaults_clm4_5.xml
M models/lnd/clm/bld/namelist_files/namelist_definition_clm4_5.xml
M models/lnd/clm/bld/CLMBuildNamelist.pm
M models/lnd/clm/doc/ChangeLog
M models/lnd/clm/doc/ChangeSum
D models/lnd/clm/src/unit_test_mocks
D models/lnd/clm/src/unit_test_mocks/util_share
D models/lnd/clm/src/unit_test_mocks/util_share/ncdio_var.F90
D models/lnd/clm/src/unit_test_mocks/util_share/restUtilMod_mock.F90
D models/lnd/clm/src/unit_test_mocks/util_share/GetGlobalValuesMod_mock.F90
D models/lnd/clm/src/unit_test_mocks/util_share/ncdio_var.F90.in
D models/lnd/clm/src/unit_test_mocks/util_share/restUtilMod_mock.F90.in
D models/lnd/clm/src/unit_test_mocks/util_share/clm_time_manager_mock.F90
D models/lnd/clm/src/unit_test_mocks/util_share/ncdio_pio_mock.F90
D models/lnd/clm/src/unit_test_mocks/util_share/spmdMod_mock.F90
D models/lnd/clm/src/unit_test_mocks/util_share/do_genf90
D models/lnd/clm/src/unit_test_mocks/util_share/CMakeLists.txt
D models/lnd/clm/src/unit_test_mocks/util_share/ncdio_pio_mock.F90.in
D models/lnd/clm/src/unit_test_mocks/csm_share
D models/lnd/clm/src/unit_test_mocks/csm_share/shr_sys_mod_mock.F90
D models/lnd/clm/src/unit_test_mocks/csm_share/mct_mod_mock.F90
D models/lnd/clm/src/unit_test_mocks/csm_share/CMakeLists.txt
D models/lnd/clm/src/unit_test_mocks/main
D models/lnd/clm/src/unit_test_mocks/main/CMakeLists.txt
D models/lnd/clm/src/unit_test_mocks/main/histFileMod_mock.F90
D models/lnd/clm/src/unit_test_mocks/dyn_subgrid
D models/lnd/clm/src/unit_test_mocks/dyn_subgrid/dynFileMod_mock.F90
D models/lnd/clm/src/unit_test_mocks/dyn_subgrid/CMakeLists.txt
D models/lnd/clm/src/unit_test_mocks/CMakeLists.txt
M models/lnd/clm/src/utils/CMakeLists.txt
A models/lnd/clm/src/biogeochem/CMakeLists.txt
M models/lnd/clm/src/biogeochem/VOCEmissionMod.F90
M models/lnd/clm/src/biogeochem/DryDepVelocity.F90
MM models/lnd/clm/src/main/clm_varcon.F90
MM models/lnd/clm/src/main/clm_initializeMod.F90
M models/lnd/clm/src/main/restFileMod.F90
M models/lnd/clm/src/main/LandunitType.F90
M models/lnd/clm/src/main/CMakeLists.txt
MM models/lnd/clm/src/main/controlMod.F90
M models/lnd/clm/src/main/filterMod.F90
M models/lnd/clm/src/main/clm_driver.F90
M models/lnd/clm/src/ED/biogeochem/EDPhysiologyMod.F90
M models/lnd/clm/src/ED/main/EDCLMLinkMod.F90
M models/lnd/clm/src/ED/main/EDBioType.F90
M models/lnd/clm/src/ED/main/EDRestVectorMod.F90
M models/lnd/clm/src/ED/main/EDInitMod.F90
M models/lnd/clm/src/ED/main/EDMainMod.F90
A models/lnd/clm/src/ED/main/CMakeLists.txt
A models/lnd/clm/src/ED/biogeophys/EDPhenologyMod.F90
M models/lnd/clm/src/README.unit_testing
M models/lnd/clm/src/biogeophys/BalanceCheckMod.F90
M models/lnd/clm/src/biogeophys/WaterfluxType.F90
MM models/lnd/clm/src/biogeophys/SoilTemperatureMod.F90
M models/lnd/clm/src/biogeophys/SnowHydrologyMod.F90
M models/lnd/clm/src/biogeophys/SoilFluxesMod.F90
M models/lnd/clm/src/biogeophys/TemperatureType.F90
A models/lnd/clm/src/biogeophys/HumanIndexMod.F90
M models/lnd/clm/src/biogeophys/LakeFluxesMod.F90
M models/lnd/clm/src/biogeophys/SoilStateType.F90
M models/lnd/clm/src/biogeophys/HydrologyDrainageMod.F90
MM models/lnd/clm/src/biogeophys/BareGroundFluxesMod.F90
MM models/lnd/clm/src/biogeophys/CanopyFluxesMod.F90
M models/lnd/clm/src/biogeophys/CMakeLists.txt
A models/lnd/clm/src/biogeophys/test/Irrigation_test/test_irrigation_deficit.pf
A models/lnd/clm/src/biogeophys/test/Irrigation_test/test_irrigation_multipatch.pf
A models/lnd/clm/src/biogeophys/test/Irrigation_test/IrrigationWrapperMod.F90
A models/lnd/clm/src/biogeophys/test/Irrigation_test/test_irrigation_singlepatch.pf
A models/lnd/clm/src/biogeophys/test/Irrigation_test/CMakeLists.txt
A models/lnd/clm/src/biogeophys/test/Irrigation_test/README
A models/lnd/clm/src/biogeophys/test/Irrigation_test
A models/lnd/clm/src/biogeophys/test/HumanStress_test/test_humanstress.pf
A models/lnd/clm/src/biogeophys/test/HumanStress_test/CMakeLists.txt
A models/lnd/clm/src/biogeophys/test/HumanStress_test
M models/lnd/clm/src/biogeophys/test/CMakeLists.txt
A models/lnd/clm/src/biogeophys/UrbBuildTempOleson2015Mod.F90
M models/lnd/clm/src/biogeophys/CanopyHydrologyMod.F90
M models/lnd/clm/src/biogeophys/EnergyFluxType.F90
M models/lnd/clm/src/biogeophys/UrbanFluxesMod.F90
A models/lnd/clm/src/biogeophys/IrrigationMod.F90
M models/lnd/clm/src/biogeophys/LakeHydrologyMod.F90
M models/lnd/clm/src/biogeophys/UrbanParamsType.F90
M models/lnd/clm/src/dyn_subgrid/CMakeLists.txt
A models/lnd/clm/src/unit_test_shr/test/unittestFilterBuilder_test/test_filterBuilder.pf
A models/lnd/clm/src/unit_test_shr/test/unittestFilterBuilder_test/CMakeLists.txt
A models/lnd/clm/src/unit_test_shr/test/unittestFilterBuilder_test
A models/lnd/clm/src/unit_test_shr/test/CMakeLists.txt
A models/lnd/clm/src/unit_test_shr/test
A models/lnd/clm/src/unit_test_shr/unittestFilterBuilderMod.F90
A models/lnd/clm/src/unit_test_shr/unittestSimpleSubgridSetupsMod.F90
M models/lnd/clm/src/unit_test_shr/unittestSubgridMod.F90
M models/lnd/clm/src/unit_test_shr/CMakeLists.txt
M models/lnd/clm/src/CMakeLists.txt
A models/lnd/clm/src/unit_test_stubs/utils/restUtilMod_stub.F90
A models/lnd/clm/src/unit_test_stubs/utils/do_genf90
A models/lnd/clm/src/unit_test_stubs/utils/restUtilMod_stub.F90.in
A models/lnd/clm/src/unit_test_stubs/utils/CMakeLists.txt
A models/lnd/clm/src/unit_test_stubs/utils/clm_time_manager_stub.F90
A models/lnd/clm/src/unit_test_stubs/utils/spmdMod_stub.F90
A models/lnd/clm/src/unit_test_stubs/utils
A models/lnd/clm/src/unit_test_stubs/csm_share/shr_mpi_mod_stub.F90
A models/lnd/clm/src/unit_test_stubs/csm_share/mct_mod_stub.F90
A models/lnd/clm/src/unit_test_stubs/csm_share/CMakeLists.txt
A models/lnd/clm/src/unit_test_stubs/csm_share
A models/lnd/clm/src/unit_test_stubs/main/histFileMod_stub.F90
A models/lnd/clm/src/unit_test_stubs/main/ncdio_var.F90
A models/lnd/clm/src/unit_test_stubs/main/ncdio_pio_fake.F90
A models/lnd/clm/src/unit_test_stubs/main/ncdio_var.F90.in
A models/lnd/clm/src/unit_test_stubs/main/GetGlobalValuesMod_stub.F90
A models/lnd/clm/src/unit_test_stubs/main/do_genf90
A models/lnd/clm/src/unit_test_stubs/main/ncdio_pio_fake.F90.in
A models/lnd/clm/src/unit_test_stubs/main/CMakeLists.txt
A models/lnd/clm/src/unit_test_stubs/main
A models/lnd/clm/src/unit_test_stubs/dyn_subgrid/dynFileMod_stub.F90
A models/lnd/clm/src/unit_test_stubs/dyn_subgrid/CMakeLists.txt
A models/lnd/clm/src/unit_test_stubs/dyn_subgrid
A models/lnd/clm/src/unit_test_stubs/CMakeLists.txt
A models/lnd/clm/src/unit_test_stubs
M SVN_EXTERNAL_DIRECTORIES
================================================================================
Originator: muszala
Date: 16 Oct 2014
Model: clm-ed
Version: ed_v010_12_clm4_5_1_r086
One-line: bug fixes from R. Fisher.
M models/lnd/clm/src/ED/biogeochem/EDPhysiologyMod.F90
-- bring in CLM time manager code, remove old date handling
M models/lnd/clm/src/ED/biogeophys/EDSurfaceAlbedoMod.F90
-- put albd(p,ib) and albi(p,ib) exprs back in place (they were commented out)
M models/lnd/clm/src/ED/biogeophys/EDPhotosynthesisMod.F90
-- change jmax25top(FT) = 0.167_r8 * vcmax25top(FT) to
-- jmax25top(FT) = 1.67_r8 * vcmax25top(FT)
-- add else branch for no leaf area
Note: I didn't make ed_v010_11_clm4_5_1_r086 so this current tag brings in
the changes in the prior tag. ed_v010_11 does not exist in the repo.
================================================================================
Originator: muszala
Date: 30 Sept 2014
Model: clm-ed
Version: ed_v010_11_clm4_5_1_r086
One-line: add .ChangeLogED and doc/ED
A models/lnd/clm/doc/ED
A .ChangeLogED
================================================================================
Originator: muszala
Date: 25 Sept 2014
Model: clm-ed
Version: ed_v010_10_clm4_5_1_r086
One-line: official merge up to clm4_5_1_r086
Create branch tag after merge up to clm4_5_1_r085. ed_v010_10_clm4_5_1_r086 and
clm4_5_1_r086 are currently identical.
================================================================================
Originator: muszala
Date: 23 Sept 2014
Model: clm-ed
Version: ed_v010_10_clm4_5_1_r085
One-line: additional mods for ED from R Fisher
M models/lnd/clm/src/main/lnd2atmMod.F90
-- change intent of waterstate_vars to inout (fixes bug 2043)
M models/lnd/clm/src/main/clm_driver.F90
-- add EDbio_vars to edmodel actual argument list
M models/lnd/clm/src/ED/biogeochem/EDCohortDynamicsMod.F90
-- change leaves_off_switch and laimemory handling
M models/lnd/clm/src/ED/biogeochem/EDPhysiologyMod.F90
-- rework cold deciduous and threshold code. add fragmentation_scaler routine
M models/lnd/clm/src/ED/main/EDMainMod.F90
-- change argument lists to include EDbio_vars for ecosystem_dynamics
-- and phenology
M models/lnd/clm/src/ED/biogeophys/EDSurfaceAlbedoMod.F90
-- overhaul ED norman radiation code
M models/lnd/clm/src/ED/biogeophys/EDPhotosynthesisMod.F90
-- tweak calculation of jmax25top and tpu25top
M models/lnd/clm/src/biogeophys/SurfaceAlbedoMod.F90
-- clean up two comments
================================================================================