snmalloc fails to build on amd64

[murraybd]

The package snmalloc fails to build from source with the following error:

time="2024-12-17T12:44:43.155163146Z" level=info msg="loading plugin" id=io.containerd.ttrpc.v1.otelttrpc type=io.containerd.ttrpc.v1
time="2024-12-17T12:44:43.155170766Z" level=info msg="loading plugin" id=io.containerd.grpc.v1.healthcheck type=io.containerd.grpc.v1
time="2024-12-17T12:44:43.155186686Z" level=info msg="loading plugin" id=io.containerd.nri.v1.nri type=io.containerd.nri.v1
time="2024-12-17T12:44:43.155379846Z" level=info msg="runtime interface created"
time="2024-12-17T12:44:43.155392386Z" level=info msg="created NRI interface"
time="2024-12-17T12:44:43.155663926Z" level=info msg=serving... address=/var/run/docker/containerd/containerd-debug.sock
time="2024-12-17T12:44:43.155752556Z" level=info msg=serving... address=/var/run/docker/containerd/containerd.sock.ttrpc
time="2024-12-17T12:44:43.155821506Z" level=info msg=serving... address=/var/run/docker/containerd/containerd.sock
time="2024-12-17T12:44:43.155853146Z" level=info msg="containerd successfully booted in 0.063932s"
time="2024-12-17T12:44:44.136204836Z" level=info msg="Loading containers: start."
time="2024-12-17T12:44:44.548718093Z" level=info msg="Loading containers: done."
time="2024-12-17T12:44:44.565112916Z" level=info msg="Docker daemon" commit=92a83937d0280dcbea92099b01e01aa4251c1777-unsupported containerd-snapshotter=false storage-driver=overlay2 version=dev
time="2024-12-17T12:44:44.565253396Z" level=info msg="Daemon has completed initialization"
time="2024-12-17T12:44:44.603766652Z" level=info msg="API listen on /var/run/docker.sock"
evaluating pipelines for package requirements
building test workspace in: '/tmp/melange-guest-205777343-main' with apko
Error: rpc error: code = NotFound desc = federate identity: rpc error: code = NotFound desc = no identity found for (https://accounts.google.com, 109346087047205543085)
Error running `chainctl auth token`: exit status 1
2024/12/17 12:44:44 [DEBUG] GET https://apk.cgr.dev/wolfi-presubmit/4bd5ceed6bfef7ea8d0094452f394ae1b0b8f580/apk-configuration
2024/12/17 12:44:45 [DEBUG] GET https://packages.wolfi.dev/os/apk-configuration
setting apk repositories: [https://apk.cgr.dev/wolfi-presubmit/4bd5ceed6bfef7ea8d0094452f394ae1b0b8f580 https://packages.wolfi.dev/os]
image configuration:
  contents:
    build repositories: []
    runtime repositories: []
    keyring:      []
    packages:     [stress-ng snmalloc]
installing libgcc (14.2.0-r6)
installing ca-certificates-bundle (20241010-r2)
installing wolfi-baselayout (20230201-r15)
installing ld-linux (2.40-r3)
installing glibc-locale-posix (2.40-r3)
installing glibc (2.40-r3)
installing snmalloc (0.7.0-r0)
installing stress-ng (0.18.07-r0)
installing wolfi-keys (1-r8)
installing zlib (1.3.1-r4)
installing libcrypto3 (3.4.0-r4)
installing libssl3 (3.4.0-r4)
installing apk-tools (2.14.4-r1)
installing libxcrypt (4.4.36-r8)
installing libcrypt1 (2.40-r3)
installing busybox (1.37.0-r0)
installing wolfi-base (1-r6)
using /tmp/apko-temp-176345970/apko-x86_64.tar.gz for image layer
OCI layer digest: sha256:12e6d90a9cce2faae3dcc31d2e0aa5e77b5fa3ceb8f5bd1fb1b25ff2248b0c9a
OCI layer diffID: sha256:5fd458225de371639059e70eaa5c6cebc6e46e06c36015ee1632beb8ab5568a9
saving OCI image locally: apko.local/cache:92c4477377d069b1db34069e2eb1a1b32bf4e9926bb24bf6979ef0c1597b1caf
skipping local domain tagging apko.local/cache:92c4477377d069b1db34069e2eb1a1b32bf4e9926bb24bf6979ef0c1597b1caf as index.docker.io/library/melange:latest
populating workspace /tmp/melange-workspace-501555499 from snmalloc
ImgRef = apko.local/cache:92c4477377d069b1db34069e2eb1a1b32bf4e9926bb24bf6979ef0c1597b1caf
time="2024-12-17T12:44:47.647822688Z" level=info msg="connecting to shim 78af81a8be5a3ca3b46b10a136eaed4523934b939536f395cb0b147b0766595c" address="unix:///run/containerd/s/a44c07e10c3fb4a87878db148324e2238255bee13b9a5019bd0da90874b85354" namespace=moby protocol=ttrpc version=3
running the main test pipeline
stress-ng: info:  [16] setting to a 5 secs run per stressor
stress-ng: info:  [16] dispatching hogs: 1 vdso
stress-ng: info:  [17] vdso: exercising vDSO functions: getcpu time gettimeofday clock_gettime clock_getres
stress-ng: metrc: [16] stressor       bogo ops real time  usr time  sys time   bogo ops/s     bogo ops/s CPU used per       RSS Max
stress-ng: metrc: [16]                           (secs)    (secs)    (secs)   (real time) (usr+sys time) instance (%)          (KB)
stress-ng: metrc: [16] vdso          403268520      5.11      5.11      0.00  78992167.50    78984415.76       100.01           608
stress-ng: metrc: [16] miscellaneous metrics:
stress-ng: metrc: [16] vdso                  10.78 nanosecs per call (excluding test overhead) (harmonic mean of 1 instance)
stress-ng: metrc: [16] vdso                   1.62 nanosecs for test overhead (geometric mean of 1 instance)
stress-ng: info:  [16] skipped: 0
stress-ng: info:  [16] passed: 1: vdso (1)
stress-ng: info:  [16] failed: 0
stress-ng: info:  [16] metrics untrustworthy: 0
stress-ng: info:  [16] successful run completed in 5.11 secs
stress-ng: info:  [19] setting to a 5 secs run per stressor
stress-ng: info:  [19] dispatching hogs: 1 vdso
stress-ng: info:  [20] vdso: exercising vDSO functions: getcpu time gettimeofday clock_gettime clock_getres
stress-ng: metrc: [19] stressor       bogo ops real time  usr time  sys time   bogo ops/s     bogo ops/s CPU used per       RSS Max
stress-ng: metrc: [19]                           (secs)    (secs)    (secs)   (real time) (usr+sys time) instance (%)          (KB)
stress-ng: metrc: [19] vdso          404693095      5.11      5.11      0.00  79269391.62    79261865.93       100.01           612
stress-ng: metrc: [19] miscellaneous metrics:
stress-ng: metrc: [19] vdso                  10.73 nanosecs per call (excluding test overhead) (harmonic mean of 1 instance)
stress-ng: metrc: [19] vdso                   1.62 nanosecs for test overhead (geometric mean of 1 instance)
stress-ng: info:  [19] skipped: 0
stress-ng: info:  [19] passed: 1: vdso (1)
stress-ng: info:  [19] failed: 0
stress-ng: info:  [19] metrics untrustworthy: 0
stress-ng: info:  [19] successful run completed in 5.11 secs
stress-ng: info:  [22] setting to a 5 secs run per stressor
stress-ng: info:  [22] dispatching hogs: 1 vdso
stress-ng: info:  [23] vdso: exercising vDSO functions: getcpu time gettimeofday clock_gettime clock_getres
stress-ng: metrc: [22] stressor       bogo ops real time  usr time  sys time   bogo ops/s     bogo ops/s CPU used per       RSS Max
stress-ng: metrc: [22]                           (secs)    (secs)    (secs)   (real time) (usr+sys time) instance (%)          (KB)
stress-ng: metrc: [22] vdso          403777770      5.11      5.10      0.00  79089315.33    79081121.96       100.01           612
stress-ng: metrc: [22] miscellaneous metrics:
stress-ng: metrc: [22] vdso                  10.76 nanosecs per call (excluding test overhead) (harmonic mean of 1 instance)
stress-ng: metrc: [22] vdso                   1.62 nanosecs for test overhead (geometric mean of 1 instance)
stress-ng: info:  [22] skipped: 0
stress-ng: info:  [22] passed: 1: vdso (1)
stress-ng: info:  [22] failed: 0
stress-ng: info:  [22] metrics untrustworthy: 0
stress-ng: info:  [22] successful run completed in 5.11 secs
time="2024-12-17T12:45:03.721185178Z" level=info msg="shim disconnected" id=78af81a8be5a3ca3b46b10a136eaed4523934b939536f395cb0b147b0766595c namespace=moby
time="2024-12-17T12:45:03.721215658Z" level=warning msg="cleaning up after shim disconnected" id=78af81a8be5a3ca3b46b10a136eaed4523934b939536f395cb0b147b0766595c namespace=moby
time="2024-12-17T12:45:03.721222818Z" level=info msg="cleaning up dead shim" namespace=moby
time="2024-12-17T12:45:03.721309538Z" level=info msg="ignoring event" container=78af81a8be5a3ca3b46b10a136eaed4523934b939536f395cb0b147b0766595c module=libcontainerd namespace=moby topic=/tasks/delete type="*events.TaskDelete"
pod 78af81a8be5a3ca3b46b10a136eaed4523934b939536f395cb0b147b0766595c terminated

[murraybd]

Manually building it I received a different error:

2024/12/17 22:46:51 INFO /home/build/src/snmalloc/override/memcpy.cc:9:26: error: redefinition of a 'extern inline' function 'memcpy' is not supported in C++
2024/12/17 22:46:51 INFO     9 |     SNMALLOC_NAME_MANGLE(memcpy)(void* dst, const void* src, size_t len)
2024/12/17 22:46:51 INFO       |                          ^
2024/12/17 22:46:51 INFO /usr/include/bits/string_fortified.h:26:8: note: previous definition is here
2024/12/17 22:46:51 INFO    26 | __NTH (memcpy (void *__restrict __dest, const void *__restrict __src,
2024/12/17 22:46:51 INFO       |        ^
2024/12/17 22:46:51 INFO 2 errors generated.
2024/12/17 22:46:51 WARN ninja: job failed: /usr/bin/clang++ -DMALLOC_USABLE_SIZE_QUALIFIER=const -DSNMALLOC_CHECK_CLIENT -DSNMALLOC_CHECK_LOADS=false -DSNMALLOC_EXPORT="__attribute__((visibility(\"default\")))" -DSNMALLOC_HAS_LINUX_RANDOM_H -DSNMALLOC_NO_REALLOCARR -DSNMALLOC_NO_REALLOCARRAY -DSNMALLOC_PAGEID=false -DSNMALLOC_PLATFORM_HAS_GETENTROPY -DSNMALLOC_USE_PTHREAD_DESTRUCTORS -Dsnmallocshim_checks_EXPORTS -I/home/build/src -O3 -DNDEBUG -std=gnu++20 -fPIC -fvisibility=hidden -fno-exceptions -fno-rtti -Wall -Wextra -Werror -Wundef -Wsign-conversion -Wconversion -fomit-frame-pointer -ffunction-sections -ftls-model=initial-exec -mcx16 -MD -MT CMakeFiles/snmallocshim-checks.dir/src/snmalloc/override/memcpy.cc.o -MF CMakeFiles/snmallocshim-checks.dir/src/snmalloc/override/memcpy.cc.o.d -o CMakeFiles/snmallocshim-checks.dir/src/snmalloc/override/memcpy.cc.o -c /home/build/src/snmalloc/override/memcpy.cc
2024/12/17 22:46:51 INFO /home/build/src/snmalloc/override/memcpy.cc:8:3: error: attribute declaration must precede definition [-Werror,-Wignored-attributes]
2024/12/17 22:46:51 INFO     8 |   SNMALLOC_EXPORT void*
2024/12/17 22:46:51 INFO       |   ^
2024/12/17 22:46:51 INFO <command line>:8:40: note: expanded from macro 'SNMALLOC_EXPORT'
2024/12/17 22:46:51 INFO     8 | #define SNMALLOC_EXPORT __attribute__((visibility("default")))
2024/12/17 22:46:51 INFO       |                                        ^
2024/12/17 22:46:51 INFO /usr/include/bits/string_fortified.h:26:8: note: previous definition is here
2024/12/17 22:46:51 INFO    26 | __NTH (memcpy (void *__restrict __dest, const void *__restrict __src,
2024/12/17 22:46:51 INFO       |        ^
2024/12/17 22:46:51 INFO /home/build/src/snmalloc/override/memcpy.cc:9:26: error: redefinition of a 'extern inline' function 'memcpy' is not supported in C++
2024/12/17 22:46:51 INFO     9 |     SNMALLOC_NAME_MANGLE(memcpy)(void* dst, const void* src, size_t len)
2024/12/17 22:46:51 INFO       |                          ^
2024/12/17 22:46:51 INFO /usr/include/bits/string_fortified.h:26:8: note: previous definition is here
2024/12/17 22:46:51 INFO    26 | __NTH (memcpy (void *__restrict __dest, const void *__restrict __src,
2024/12/17 22:46:51 INFO       |        ^
2024/12/17 22:46:51 INFO 2 errors generated.
2024/12/17 22:46:53 WARN ninja: subcommands failed