singlecomputersetup.tar.gz

playbook/0000775000175000017500000000000013676437625012351 5ustar  ubuntuubuntuplaybook/roles/0000775000175000017500000000000013673272441013463 5ustar  ubuntuubuntuplaybook/roles/general/0000775000175000017500000000000013673272415015101 5ustar  ubuntuubuntuplaybook/roles/general/README.md0000664000175000017500000000246013673272415016362 0ustar  ubuntuubuntuRole Name
=========

A brief description of the role goes here.

Requirements
------------

Any pre-requisites that may not be covered by Ansible itself or the role should be mentioned here. For instance, if the role uses the EC2 module, it may be a good idea to mention in this section that the boto package is required.

Role Variables
--------------

A description of the settable variables for this role should go here, including any variables that are in defaults/main.yml, vars/main.yml, and any variables that can/should be set via parameters to the role. Any variables that are read from other roles and/or the global scope (ie. hostvars, group vars, etc.) should be mentioned here as well.

Dependencies
------------

A list of other roles hosted on Galaxy should go here, plus any details in regards to parameters that may need to be set for other roles, or variables that are used from other roles.

Example Playbook
----------------

Including an example of how to use your role (for instance, with variables passed in as parameters) is always nice for users too:

    - hosts: servers
      roles:
         - { role: username.rolename, x: 42 }

License
-------

BSD

Author Information
------------------

An optional section for the role authors to include contact information, or a website (HTML is not allowed).
playbook/roles/general/tests/0000775000175000017500000000000013673272415016243 5ustar  ubuntuubuntuplaybook/roles/general/tests/test.yml0000664000175000017500000000010113673272415017735 0ustar  ubuntuubuntu---
- hosts: localhost
  remote_user: root
  roles:
    - generalplaybook/roles/general/tests/inventory0000664000175000017500000000001313673272415020215 0ustar  ubuntuubuntulocalhost

playbook/roles/general/defaults/0000775000175000017500000000000013673272415016710 5ustar  ubuntuubuntuplaybook/roles/general/defaults/main.yml0000664000175000017500000000003713673272415020357 0ustar  ubuntuubuntu---
# defaults file for generalplaybook/roles/general/meta/0000775000175000017500000000000013673272415016027 5ustar  ubuntuubuntuplaybook/roles/general/meta/main.yml0000664000175000017500000000314513673272415017501 0ustar  ubuntuubuntugalaxy_info:
  author: your name
  description: your role description
  company: your company (optional)

  # If the issue tracker for your role is not on github, uncomment the
  # next line and provide a value
  # issue_tracker_url: http://example.com/issue/tracker

  # Choose a valid license ID from https://spdx.org - some suggested licenses:
  # - BSD-3-Clause (default)
  # - MIT
  # - GPL-2.0-or-later
  # - GPL-3.0-only
  # - Apache-2.0
  # - CC-BY-4.0
  license: license (GPL-2.0-or-later, MIT, etc)

  min_ansible_version: 2.9

  # If this a Container Enabled role, provide the minimum Ansible Container version.
  # min_ansible_container_version:

  #
  # Provide a list of supported platforms, and for each platform a list of versions.
  # If you don't wish to enumerate all versions for a particular platform, use 'all'.
  # To view available platforms and versions (or releases), visit:
  # https://galaxy.ansible.com/api/v1/platforms/
  #
  # platforms:
  # - name: Fedora
  #   versions:
  #   - all
  #   - 25
  # - name: SomePlatform
  #   versions:
  #   - all
  #   - 1.0
  #   - 7
  #   - 99.99

  galaxy_tags: []
    # List tags for your role here, one per line. A tag is a keyword that describes
    # and categorizes the role. Users find roles by searching for tags. Be sure to
    # remove the '[]' above, if you add tags to this list.
    #
    # NOTE: A tag is limited to a single word comprised of alphanumeric characters.
    #       Maximum 20 tags per role.

dependencies: []
  # List your role dependencies here, one per line. Be sure to remove the '[]' above,
  # if you add dependencies to this list.
  playbook/roles/general/.travis.yml0000664000175000017500000000103313673272415017207 0ustar  ubuntuubuntu---
language: python
python: "2.7"

# Use the new container infrastructure
sudo: false

# Install ansible
addons:
  apt:
    packages:
    - python-pip

install:
  # Install ansible
  - pip install ansible

  # Check ansible version
  - ansible --version

  # Create ansible.cfg with correct roles_path
  - printf '[defaults]\nroles_path=../' >ansible.cfg

script:
  # Basic role syntax check
  - ansible-playbook tests/test.yml -i tests/inventory --syntax-check

notifications:
  webhooks: https://galaxy.ansible.com/api/v1/notifications/playbook/roles/general/handlers/0000775000175000017500000000000013673272415016701 5ustar  ubuntuubuntuplaybook/roles/general/handlers/main.yml0000664000175000017500000000003713673272415020350 0ustar  ubuntuubuntu---
# handlers file for generalplaybook/roles/general/vars/0000775000175000017500000000000013673272415016054 5ustar  ubuntuubuntuplaybook/roles/general/vars/main.yml0000664000175000017500000000003313673272415017517 0ustar  ubuntuubuntu---
# vars file for generalplaybook/roles/general/tasks/0000775000175000017500000000000013676643340016230 5ustar  ubuntuubuntuplaybook/roles/general/tasks/main.yml0000664000175000017500000000163213676643340017701 0ustar  ubuntuubuntu---
- name: Update Cache
  apt:
    cache_valid_time: 7600

- name: Install JDK
  apt:
    name: openjdk-8-jdk

- name: Set Java_Home
  lineinfile:
    path: /etc/bash.bashrc
    line: /usr/lib/jvm/java-1.8.0-openjdk-amd64

- name: Set Java versiom
  shell: sudo update-java-alternatives -s java-1.8.0-openjdk-amd64

- name: Install apt-transport-https
  apt:
    name: apt-transport-https
    state: latest

- name: Install cmake
  apt:
    name: make

- name: Install g++
  apt:
    name: g++

- name: Download spark
  get_url:
    url: https://archive.apache.org/dist/spark/spark-2.4.4/spark-2.4.4-bin-hadoop2.7.tgz
    dest: /home/ubuntu/
    mode: '0667'

- name: Make spark directory
  file:
    path: /home/ubuntu/spark
    state: directory
  become_user: ubuntu

- name: Extract Spark from archive
  unarchive:
    src: /home/ubuntu/spark-2.4.4-bin-hadoop2.7.tgz
    dest: /home/ubuntu/spark
  become_user: ubuntu
playbook/roles/mainnode/0000775000175000017500000000000013673272433015256 5ustar  ubuntuubuntuplaybook/roles/mainnode/README.md0000664000175000017500000000246013673272433016537 0ustar  ubuntuubuntuRole Name
=========

A brief description of the role goes here.

Requirements
------------

Any pre-requisites that may not be covered by Ansible itself or the role should be mentioned here. For instance, if the role uses the EC2 module, it may be a good idea to mention in this section that the boto package is required.

Role Variables
--------------

A description of the settable variables for this role should go here, including any variables that are in defaults/main.yml, vars/main.yml, and any variables that can/should be set via parameters to the role. Any variables that are read from other roles and/or the global scope (ie. hostvars, group vars, etc.) should be mentioned here as well.

Dependencies
------------

A list of other roles hosted on Galaxy should go here, plus any details in regards to parameters that may need to be set for other roles, or variables that are used from other roles.

Example Playbook
----------------

Including an example of how to use your role (for instance, with variables passed in as parameters) is always nice for users too:

    - hosts: servers
      roles:
         - { role: username.rolename, x: 42 }

License
-------

BSD

Author Information
------------------

An optional section for the role authors to include contact information, or a website (HTML is not allowed).
playbook/roles/mainnode/tests/0000775000175000017500000000000013673272433016420 5ustar  ubuntuubuntuplaybook/roles/mainnode/tests/test.yml0000664000175000017500000000010213673272433020113 0ustar  ubuntuubuntu---
- hosts: localhost
  remote_user: root
  roles:
    - mainnodeplaybook/roles/mainnode/tests/inventory0000664000175000017500000000001313673272433020372 0ustar  ubuntuubuntulocalhost

playbook/roles/mainnode/defaults/0000775000175000017500000000000013673272433017065 5ustar  ubuntuubuntuplaybook/roles/mainnode/defaults/main.yml0000664000175000017500000000004013673272433020526 0ustar  ubuntuubuntu---
# defaults file for mainnodeplaybook/roles/mainnode/meta/0000775000175000017500000000000013673272433016204 5ustar  ubuntuubuntuplaybook/roles/mainnode/meta/main.yml0000664000175000017500000000314513673272433017656 0ustar  ubuntuubuntugalaxy_info:
  author: your name
  description: your role description
  company: your company (optional)

  # If the issue tracker for your role is not on github, uncomment the
  # next line and provide a value
  # issue_tracker_url: http://example.com/issue/tracker

  # Choose a valid license ID from https://spdx.org - some suggested licenses:
  # - BSD-3-Clause (default)
  # - MIT
  # - GPL-2.0-or-later
  # - GPL-3.0-only
  # - Apache-2.0
  # - CC-BY-4.0
  license: license (GPL-2.0-or-later, MIT, etc)

  min_ansible_version: 2.9

  # If this a Container Enabled role, provide the minimum Ansible Container version.
  # min_ansible_container_version:

  #
  # Provide a list of supported platforms, and for each platform a list of versions.
  # If you don't wish to enumerate all versions for a particular platform, use 'all'.
  # To view available platforms and versions (or releases), visit:
  # https://galaxy.ansible.com/api/v1/platforms/
  #
  # platforms:
  # - name: Fedora
  #   versions:
  #   - all
  #   - 25
  # - name: SomePlatform
  #   versions:
  #   - all
  #   - 1.0
  #   - 7
  #   - 99.99

  galaxy_tags: []
    # List tags for your role here, one per line. A tag is a keyword that describes
    # and categorizes the role. Users find roles by searching for tags. Be sure to
    # remove the '[]' above, if you add tags to this list.
    #
    # NOTE: A tag is limited to a single word comprised of alphanumeric characters.
    #       Maximum 20 tags per role.

dependencies: []
  # List your role dependencies here, one per line. Be sure to remove the '[]' above,
  # if you add dependencies to this list.
  playbook/roles/mainnode/.travis.yml0000664000175000017500000000103313673272433017364 0ustar  ubuntuubuntu---
language: python
python: "2.7"

# Use the new container infrastructure
sudo: false

# Install ansible
addons:
  apt:
    packages:
    - python-pip

install:
  # Install ansible
  - pip install ansible

  # Check ansible version
  - ansible --version

  # Create ansible.cfg with correct roles_path
  - printf '[defaults]\nroles_path=../' >ansible.cfg

script:
  # Basic role syntax check
  - ansible-playbook tests/test.yml -i tests/inventory --syntax-check

notifications:
  webhooks: https://galaxy.ansible.com/api/v1/notifications/playbook/roles/mainnode/handlers/0000775000175000017500000000000013673272433017056 5ustar  ubuntuubuntuplaybook/roles/mainnode/handlers/main.yml0000664000175000017500000000004013673272433020517 0ustar  ubuntuubuntu---
# handlers file for mainnodeplaybook/roles/mainnode/vars/0000775000175000017500000000000013673272433016231 5ustar  ubuntuubuntuplaybook/roles/mainnode/vars/main.yml0000664000175000017500000000003413673272433017675 0ustar  ubuntuubuntu---
# vars file for mainnodeplaybook/roles/mainnode/tasks/0000775000175000017500000000000013676653632016412 5ustar  ubuntuubuntuplaybook/roles/mainnode/tasks/main.yml0000664000175000017500000000212213676653631020055 0ustar  ubuntuubuntu---
- name: Update Cache
  apt:
    cache_valid_time: 7600

- name: Make git directory
  file:
    path: /home/ubuntu/NanoRealTimeAnalysis
    state: directory
  become_user: ubuntu

- name: Download p+h+v centrifuge index
  get_url:
    url: ftp://ftp.ccb.jhu.edu/pub/infphilo/centrifuge/data/p+h+v.tar.gz
    dest: /mnt/
    mode: '0667'

- name: Create monitored directory on shared volume
  file:
    path: /mnt/sequences
    state: directory
    mode: '0777'
  become: true

- name: Checkout Github repo NanoRealTimeAnalysis
  git:
    repo: 'https://github.com/vckraemer/NanoporeRealTimeAnalysis.git'
    dest: /home/ubuntu/NanoRealTimeAnalysis
  become_user: ubuntu

- name: Install maven
  apt:
    name: maven
    state: latest

- name: Compile source code with maven
  command: mvn clean compile assembly:single
  become_user: ubuntu
  args:
    chdir: /home/ubuntu/NanoRealTimeAnalysis

- name: Download Spark Pool Configuration
  get_url:
    url: https://raw.githubusercontent.com/vckraemer/NanoporeRealTimeAnalysis/master/SparkConFiles/fair_pools.xml
    dest: /home/ubuntu/
    mode: '0777'
playbook/roles/othernodes/0000775000175000017500000000000013673272441015635 5ustar  ubuntuubuntuplaybook/roles/othernodes/README.md0000664000175000017500000000246013673272441017116 0ustar  ubuntuubuntuRole Name
=========

A brief description of the role goes here.

Requirements
------------

Any pre-requisites that may not be covered by Ansible itself or the role should be mentioned here. For instance, if the role uses the EC2 module, it may be a good idea to mention in this section that the boto package is required.

Role Variables
--------------

A description of the settable variables for this role should go here, including any variables that are in defaults/main.yml, vars/main.yml, and any variables that can/should be set via parameters to the role. Any variables that are read from other roles and/or the global scope (ie. hostvars, group vars, etc.) should be mentioned here as well.

Dependencies
------------

A list of other roles hosted on Galaxy should go here, plus any details in regards to parameters that may need to be set for other roles, or variables that are used from other roles.

Example Playbook
----------------

Including an example of how to use your role (for instance, with variables passed in as parameters) is always nice for users too:

    - hosts: servers
      roles:
         - { role: username.rolename, x: 42 }

License
-------

BSD

Author Information
------------------

An optional section for the role authors to include contact information, or a website (HTML is not allowed).
playbook/roles/othernodes/tests/0000775000175000017500000000000013673272441016777 5ustar  ubuntuubuntuplaybook/roles/othernodes/tests/test.yml0000664000175000017500000000010413673272441020474 0ustar  ubuntuubuntu---
- hosts: localhost
  remote_user: root
  roles:
    - othernodesplaybook/roles/othernodes/tests/inventory0000664000175000017500000000001313673272441020751 0ustar  ubuntuubuntulocalhost

playbook/roles/othernodes/defaults/0000775000175000017500000000000013673272441017444 5ustar  ubuntuubuntuplaybook/roles/othernodes/defaults/main.yml0000664000175000017500000000004213673272441021107 0ustar  ubuntuubuntu---
# defaults file for othernodesplaybook/roles/othernodes/meta/0000775000175000017500000000000013673272441016563 5ustar  ubuntuubuntuplaybook/roles/othernodes/meta/main.yml0000664000175000017500000000314513673272441020235 0ustar  ubuntuubuntugalaxy_info:
  author: your name
  description: your role description
  company: your company (optional)

  # If the issue tracker for your role is not on github, uncomment the
  # next line and provide a value
  # issue_tracker_url: http://example.com/issue/tracker

  # Choose a valid license ID from https://spdx.org - some suggested licenses:
  # - BSD-3-Clause (default)
  # - MIT
  # - GPL-2.0-or-later
  # - GPL-3.0-only
  # - Apache-2.0
  # - CC-BY-4.0
  license: license (GPL-2.0-or-later, MIT, etc)

  min_ansible_version: 2.9

  # If this a Container Enabled role, provide the minimum Ansible Container version.
  # min_ansible_container_version:

  #
  # Provide a list of supported platforms, and for each platform a list of versions.
  # If you don't wish to enumerate all versions for a particular platform, use 'all'.
  # To view available platforms and versions (or releases), visit:
  # https://galaxy.ansible.com/api/v1/platforms/
  #
  # platforms:
  # - name: Fedora
  #   versions:
  #   - all
  #   - 25
  # - name: SomePlatform
  #   versions:
  #   - all
  #   - 1.0
  #   - 7
  #   - 99.99

  galaxy_tags: []
    # List tags for your role here, one per line. A tag is a keyword that describes
    # and categorizes the role. Users find roles by searching for tags. Be sure to
    # remove the '[]' above, if you add tags to this list.
    #
    # NOTE: A tag is limited to a single word comprised of alphanumeric characters.
    #       Maximum 20 tags per role.

dependencies: []
  # List your role dependencies here, one per line. Be sure to remove the '[]' above,
  # if you add dependencies to this list.
  playbook/roles/othernodes/.travis.yml0000664000175000017500000000103313673272441017743 0ustar  ubuntuubuntu---
language: python
python: "2.7"

# Use the new container infrastructure
sudo: false

# Install ansible
addons:
  apt:
    packages:
    - python-pip

install:
  # Install ansible
  - pip install ansible

  # Check ansible version
  - ansible --version

  # Create ansible.cfg with correct roles_path
  - printf '[defaults]\nroles_path=../' >ansible.cfg

script:
  # Basic role syntax check
  - ansible-playbook tests/test.yml -i tests/inventory --syntax-check

notifications:
  webhooks: https://galaxy.ansible.com/api/v1/notifications/playbook/roles/othernodes/handlers/0000775000175000017500000000000013673272441017435 5ustar  ubuntuubuntuplaybook/roles/othernodes/handlers/main.yml0000664000175000017500000000004213673272441021100 0ustar  ubuntuubuntu---
# handlers file for othernodesplaybook/roles/othernodes/vars/0000775000175000017500000000000013673272441016610 5ustar  ubuntuubuntuplaybook/roles/othernodes/vars/main.yml0000664000175000017500000000003613673272441020256 0ustar  ubuntuubuntu---
# vars file for othernodesplaybook/roles/othernodes/tasks/0000775000175000017500000000000013676653603016770 5ustar  ubuntuubuntuplaybook/roles/othernodes/tasks/last.yml0000664000175000017500000000210513676440324020446 0ustar  ubuntuubuntu- name: Install LAST
  apt:
    name: last-align
    state: latest

- name: Install LAST
  apt:
    name: unzip
    state: latest

- name: Download ARGANNOT LAST db
  get_url:
    url: https://uni-bielefeld.sciebo.de/s/zjeWBhdbyVHMVPI/download
    dest: /home/ubuntu/arg_annot_db.tar.gz

- name: Extract ARGANNOT LAST db from archive
  unarchive:
    src: /home/ubuntu/arg_annot_db.tar.gz
    dest: /home/ubuntu/
    remote_src: yes
  become_user: ubuntu

- name: Download ResFinder LAST db
  get_url:
    url: https://uni-bielefeld.sciebo.de/s/OGIrQkW7LP4mQFS/download
    dest: /home/ubuntu/resfinderdb.tar.gz

- name: Extract Resfinder LAST db from archive
  unarchive:
    src: /home/ubuntu/resfinderdb.tar.gz
    dest: /home/ubuntu/
    remote_src: yes
  become_user: ubuntu

- name: Download AMRFinder LAST db
  get_url:
    url: https://uni-bielefeld.sciebo.de/s/lS4UYxyLDVOeWfC/download
    dest: /home/ubuntu/amrdb.tar.gz

- name: Extract AMRFinder LAST db from archive
  unarchive:
    src: /home/ubuntu/amrdb.tar.gz
    dest: /home/ubuntu/
    remote_src: yes
  become_user: ubuntu
playbook/roles/othernodes/tasks/centrifuge.yml0000664000175000017500000000145013676645424021650 0ustar  ubuntuubuntu- name: Make git directory
  file:
    path: /home/ubuntu/centrifuge
    state: directory
  become_user: ubuntu

- name: Checkout Github repo centrifuge
  git:
    repo: 'https://github.com/infphilo/centrifuge'
    dest: /home/ubuntu/centrifuge
  become_user: ubuntu

- name: Build 'default' target
  shell:
    cmd: make
    chdir: /home/ubuntu/centrifuge


- name: Build 'install' target with extra arguments
  make:
    chdir: /home/ubuntu/centrifuge
    target: install
    params:
      prefix: /usr/local

- name: Make Centrifuge p+h+v.tar.gz index directory
  file:
    path: /mnt/p+h+v/
    state: directory
    mode: 0777
  become: true

- name: Extract Centrifuge p+h+v index data from archive
  unarchive:
    src: /mnt/p+h+v.tar.gz
    dest: /mnt/p+h+v/
    remote_src: yes
  become_user: ubuntu
playbook/roles/othernodes/tasks/taxon2lineageConfiguration.yml0000664000175000017500000000276713673272441025011 0ustar  ubuntuubuntu- name: Download Taxonomy data
  get_url:
    url: https://github.com/vckraemer/NanoporeRealTimeAnalysis/raw/master/databases/taxdump.tar.gz
    dest: /home/ubuntu/
    mode: '0777'

- name: Make taxonomy db directory
  file:
    path: /home/ubuntu/taxonomy/
    state: directory
    mode: 0777
  become_user: ubuntu

- name: Extract Taxonomy data from archive
  unarchive:
    src: /home/ubuntu/taxdump.tar.gz
    dest: /home/ubuntu/taxonomy/
    remote_src: yes
  become_user: ubuntu

- name: Download taxon2lineage
  get_url:
    url: https://raw.githubusercontent.com/virus-x-eu/tools/master/taxon2lineage/1.0/megan_taxon2lineage.pl
    dest: /home/ubuntu/
    mode: '0777'

- name: Setup environment for taxon2lineage
  become: yes
  shell: "apt-get install -y wget build-essential make perl libexpat1-dev"

- name: Configure cpan
  become: yes
  shell: "(echo y;echo o conf prerequisites_policy follow;echo o conf commit)|cpan"

- name: Configure cpan
  become: yes
  shell: "cpan -fi Moose"

- name: Configure cpan
  become: yes
  shell: "cpan -fi IPC::Run"

- name: Configure cpan
  become: yes
  shell: "cpan -fi Bio::LITE::Taxonomy::NCBI"

- name: Configure cpan
  become: yes
  shell: "cpan -fi Bio::SearchIO"

- name: Setup environment for taxon2lineage
  become: yes
  shell: "apt-get purge -y build-essential make libexpat1-dev"

- name: Setup environment for taxon2lineage
  become: yes
  shell: "apt-get autoremove -y --purge"

- name: Setup environment for taxon2lineage
  become: yes
  shell: "apt-get clean"
playbook/roles/othernodes/tasks/main.yml0000664000175000017500000000401313676653603020435 0ustar  ubuntuubuntu---
- name: Update Cache
  apt:
    cache_valid_time: 7600

- name: "Setup Centrifuge"
  include: centrifuge.yml

- name: "Setup LAST"
  include: last.yml

- name: Make tmp directory
  file:
    path: /mnt/tmp_results
    state: directory
    mode: 0777
  become: true
  become_method: sudo


- name: Download Centrifuge Wrapper
  get_url:
    url: https://raw.githubusercontent.com/vckraemer/NanoporeRealTimeAnalysis/master/Wrapper/centrifugeWrapper.sh
    dest: /home/ubuntu/
    mode: '0777'
  become_user: ubuntu

- name: Download Lineage Wrapper
  get_url:
    url: https://raw.githubusercontent.com/vckraemer/NanoporeRealTimeAnalysis/master/Wrapper/taxonomyToLineageWrapper.sh
    dest: /home/ubuntu/
    mode: '0777'
  become_user: ubuntu

- name: Download taxon2lineage
  get_url:
    url: https://raw.githubusercontent.com/virus-x-eu/tools/master/taxon2lineage/1.0/megan_taxon2lineage.pl
    dest: /home/ubuntu/
    mode: '0777'
  become_user: ubuntu

- name: Download etelineage.py
  get_url:
    url: https://raw.githubusercontent.com/vckraemer/NanoporeRealTimeAnalysis/master/Scripts/etelineage.py
    dest: /home/ubuntu/
    mode: '0777'
  become_user: ubuntu


- name: Make etetoolkit directory
  file:
    path: /home/ubuntu/.etetoolkit
    state: directory
    mode: 0777
  become_user: ubuntu

#- name: Download taxa.tar.gz
#  shell: wget -P /home/ubuntu/ -O taxa.tar.gz https://uni-bielefeld.sciebo.de/s/pEFN2jwrUnfHgpY/download

#- name: Extract taxa.tar.gz
#  unarchive:
#    src: /home/ubuntu/taxa.tar.gz
#    dest: /home/ubuntu/.etetoolkit
 #   remote_src: yes
#  become_user: ubuntu

#- name: Download taxa.tar.gz
#  shell: wget -P /home/ubuntu/ -O taxatraverse.tar.gz https://uni-bielefeld.sciebo.de/s/ixj76Az5uxuwuFb/download

#- name: Extract taxatraverse.tar.gz
#  unarchive:
#    src: /home/ubuntu/taxatraverse.tar.gz
#    dest: /home/ubuntu/.etetoolkit
#    remote_src: yes
#  become_user: ubuntu

- name: Install pip
  apt:
    name: python3-pip
    state: latest

- name: install ete3
  become: yes
  shell: "pip3 install ete3"
playbook/hosts0000664000175000017500000000011613675216761013425 0ustar  ubuntuubuntu[local]
localhost ansible_connection=local ansible_python_interpreter=python3
playbook/site.retry0000664000175000017500000000001213676647130014367 0ustar  ubuntuubuntulocalhost
playbook/site.yml0000664000175000017500000000012413675216771014031 0ustar  ubuntuubuntu- hosts: all
  become: 'yes'
  roles:
    - general
    - mainnode
    - othernodes