diff --git a/revdep/README.md b/revdep/README.md
index 76d89719f1..8d59c3216f 100644
--- a/revdep/README.md
+++ b/revdep/README.md
@@ -2,142 +2,152 @@
|field |value |
|:--------|:----------------------------|
-|version |R version 3.5.3 (2019-03-11) |
+|version |R version 3.6.0 (2019-04-26) |
|os |macOS Mojave 10.14.4 |
|system |x86_64, darwin15.6.0 |
|ui |X11 |
|language |(EN) |
-|collate |fr_FR.UTF-8 |
-|ctype |fr_FR.UTF-8 |
+|collate |en_US.UTF-8 |
+|ctype |en_US.UTF-8 |
|tz |Europe/Paris |
-|date |2019-04-10 |
+|date |2019-05-06 |
# Dependencies
-|package |old |new |Δ |
-|:-------|:-------|:---|:--|
-|dplyr |0.8.0.1 |NA |* |
+|package |old |new |Δ |
+|:-------|:-------|:-----|:--|
+|dplyr |0.8.0.1 |0.8.1 |* |
# Revdeps
-## Couldn't check (88)
+## Failed to check (95)
-|package |version |error |warning |note |source |
-|:--------------------------------------------------------|:---------|:-----|:-------|:----|:-------------------------------------------------------------------------|
-|[ACDm](problems.md#acdm) |1.0.4 |1 | | |[cran/ACDm](https://github.com/cran/ACDm) |
-|[ADMMsigma](problems.md#admmsigma) |2.1 |1 | | |[cran/ADMMsigma](https://github.com/cran/ADMMsigma) |
-|[airGR](problems.md#airgr) |1.2.13.16 |1 | | |[cran/airGR](https://github.com/cran/airGR) |
-|[BAS](problems.md#bas) |1.5.3 |1 | | |[cran/BAS](https://github.com/cran/BAS) |
-|[BgeeDB](problems.md#bgeedb) |2.8.0 |1 | | |[cran/BgeeDB](https://github.com/cran/BgeeDB) |
-|[BMTME](problems.md#bmtme) |1.0.6 |1 | | |[cran/BMTME](https://github.com/cran/BMTME) |
-|[BradleyTerryScalable](problems.md#bradleyterryscalable) |0.1.0 |1 | | |[cran/BradleyTerryScalable](https://github.com/cran/BradleyTerryScalable) |
-|[brunnermunzel](problems.md#brunnermunzel) |1.3.2 |1 | | |[cran/brunnermunzel](https://github.com/cran/brunnermunzel) |
-|[bsam](problems.md#bsam) |1.1.2 |1 | | |[cran/bsam](https://github.com/cran/bsam) |
-|[CaseBasedReasoning](problems.md#casebasedreasoning) |0.1 |1 | | |[cran/CaseBasedReasoning](https://github.com/cran/CaseBasedReasoning) |
-|[CB2](problems.md#cb2) |1.1 |1 | | |[cran/CB2](https://github.com/cran/CB2) |
-|[ccrs](problems.md#ccrs) |0.1.0 |1 | | |[cran/ccrs](https://github.com/cran/ccrs) |
-|[CEMiTool](problems.md#cemitool) |1.6.11 |1 | | |[cran/CEMiTool](https://github.com/cran/CEMiTool) |
-|[circumplex](problems.md#circumplex) |0.2.1 |1 | | |[cran/circumplex](https://github.com/cran/circumplex) |
-|[CNPBayes](problems.md#cnpbayes) |1.12.0 |1 | | |[cran/CNPBayes](https://github.com/cran/CNPBayes) |
-|[CollapsABEL](problems.md#collapsabel) |0.10.11 |1 | | |[cran/CollapsABEL](https://github.com/cran/CollapsABEL) |
-|[colorednoise](problems.md#colorednoise) |1.0.4 |1 | | |[cran/colorednoise](https://github.com/cran/colorednoise) |
-|[COMPASS](problems.md#compass) |1.20.1 |1 | |1 |[cran/COMPASS](https://github.com/cran/COMPASS) |
-|[Countr](problems.md#countr) |3.5.2 |1 | | |[cran/Countr](https://github.com/cran/Countr) |
-|[cpr](problems.md#cpr) |0.2.3 |1 | | |[cran/cpr](https://github.com/cran/cpr) |
-|[crawl](problems.md#crawl) |2.2.1 |1 | | |[cran/crawl](https://github.com/cran/crawl) |
-|[DAPAR](problems.md#dapar) |1.14.5 |1 | | |[cran/DAPAR](https://github.com/cran/DAPAR) |
-|[DataVisualizations](problems.md#datavisualizations) |1.1.6 |1 | | |[cran/DataVisualizations](https://github.com/cran/DataVisualizations) |
-|[DepthProc](problems.md#depthproc) |2.0.4 |1 | | |[cran/DepthProc](https://github.com/cran/DepthProc) |
-|[DiffBind](problems.md#diffbind) |2.10.0 |1 | |1 |[cran/DiffBind](https://github.com/cran/DiffBind) |
-|[DiversityOccupancy](problems.md#diversityoccupancy) |1.0.6 |1 | | |[cran/DiversityOccupancy](https://github.com/cran/DiversityOccupancy) |
-|[dtwclust](problems.md#dtwclust) |5.5.2 |1 | | |[cran/dtwclust](https://github.com/cran/dtwclust) |
-|[dynfrail](problems.md#dynfrail) |0.5.2 |1 | | |[cran/dynfrail](https://github.com/cran/dynfrail) |
-|[ELMER](problems.md#elmer) |2.6.3 |1 | | |[cran/ELMER](https://github.com/cran/ELMER) |
-|[exuber](problems.md#exuber) |0.2.1 |1 | | |[cran/exuber](https://github.com/cran/exuber) |
-|[fastLink](problems.md#fastlink) |0.5.0 |1 | | |[cran/fastLink](https://github.com/cran/fastLink) |
-|[fourierin](problems.md#fourierin) |0.2.4 |1 | | |[cran/fourierin](https://github.com/cran/fourierin) |
-|[FSelectorRcpp](problems.md#fselectorrcpp) |0.3.0 |1 | |1 |[cran/FSelectorRcpp](https://github.com/cran/FSelectorRcpp) |
-|[GenomicMating](problems.md#genomicmating) |2.0 |1 | | |[cran/GenomicMating](https://github.com/cran/GenomicMating) |
-|[goldi](problems.md#goldi) |1.0.1 |1 | | |[cran/goldi](https://github.com/cran/goldi) |
-|[graphicalVAR](problems.md#graphicalvar) |0.2.2 |1 | | |[cran/graphicalVAR](https://github.com/cran/graphicalVAR) |
-|[heatwaveR](problems.md#heatwaver) |0.3.6 |1 | | |[cran/heatwaveR](https://github.com/cran/heatwaveR) |
-|[HPAanalyze](problems.md#hpaanalyze) |1.0.0 |1 | | |[cran/HPAanalyze](https://github.com/cran/HPAanalyze) |
-|[iCNV](problems.md#icnv) |1.2.1 |1 | | |[cran/iCNV](https://github.com/cran/iCNV) |
-|[idefix](problems.md#idefix) |0.3.3 |1 | | |[cran/idefix](https://github.com/cran/idefix) |
-|[ijtiff](problems.md#ijtiff) |1.5.0 |1 | | |[cran/ijtiff](https://github.com/cran/ijtiff) |
-|[iRF](problems.md#irf) |2.0.0 |1 | | |[cran/iRF](https://github.com/cran/iRF) |
-|[lilikoi](problems.md#lilikoi) |0.1.0 |1 | | |[cran/lilikoi](https://github.com/cran/lilikoi) |
-|[LLSR](problems.md#llsr) |0.0.2.19 |1 | | |[cran/LLSR](https://github.com/cran/LLSR) |
-|[lpirfs](problems.md#lpirfs) |0.1.4 |1 | | |[cran/lpirfs](https://github.com/cran/lpirfs) |
-|[miceFast](problems.md#micefast) |0.2.3 |1 | | |[cran/miceFast](https://github.com/cran/miceFast) |
-|[mleap](problems.md#mleap) |0.1.3 |1 | | |[cran/mleap](https://github.com/cran/mleap) |
-|[morse](problems.md#morse) |3.2.2 |1 | | |[cran/morse](https://github.com/cran/morse) |
-|[mrgsolve](problems.md#mrgsolve) |0.9.0 |1 | | |[cran/mrgsolve](https://github.com/cran/mrgsolve) |
-|[multiHiCcompare](problems.md#multihiccompare) |1.0.0 |1 | | |[cran/multiHiCcompare](https://github.com/cran/multiHiCcompare) |
-|[nlmixr](problems.md#nlmixr) |1.0.0-7 |1 | | |[cran/nlmixr](https://github.com/cran/nlmixr) |
-|[openair](problems.md#openair) |2.6-5 |1 | | |[cran/openair](https://github.com/cran/openair) |
-|[pccc](problems.md#pccc) |1.0.2 |1 | | |[cran/pccc](https://github.com/cran/pccc) |
-|[petro.One](problems.md#petroone) |0.2.3 |1 | | |[cran/petro.One](https://github.com/cran/petro.One) |
-|[phase1PRMD](problems.md#phase1prmd) |1.0.1 |1 | | |[cran/phase1PRMD](https://github.com/cran/phase1PRMD) |
-|[phenofit](problems.md#phenofit) |0.2.0 |1 | | |[cran/phenofit](https://github.com/cran/phenofit) |
-|[poppr](problems.md#poppr) |2.8.2 |1 | | |[cran/poppr](https://github.com/cran/poppr) |
-|[PPforest](problems.md#ppforest) |0.1.1 |1 | | |[cran/PPforest](https://github.com/cran/PPforest) |
-|[pRoloc](problems.md#proloc) |1.22.2 |1 | |1 |[cran/pRoloc](https://github.com/cran/pRoloc) |
-|[qdap](problems.md#qdap) |2.3.2 |1 | | |[cran/qdap](https://github.com/cran/qdap) |
-|[quanteda](problems.md#quanteda) |1.4.3 |1 | | |[cran/quanteda](https://github.com/cran/quanteda) |
-|[quokar](problems.md#quokar) |0.1.0 |1 | | |[cran/quokar](https://github.com/cran/quokar) |
-|[qwraps2](problems.md#qwraps2) |0.4.1 |1 | | |[cran/qwraps2](https://github.com/cran/qwraps2) |
-|[Rdrools](problems.md#rdrools) |1.1.1 |1 | | |[cran/Rdrools](https://github.com/cran/Rdrools) |
-|Recon |? | | | |[cran/Recon](https://github.com/cran/Recon) |
-|[resautonet](problems.md#resautonet) |1.0 |1 | | |[cran/resautonet](https://github.com/cran/resautonet) |
-|[RGMQL](problems.md#rgmql) |1.2.0 |1 | | |[cran/RGMQL](https://github.com/cran/RGMQL) |
-|[rmcfs](problems.md#rmcfs) |1.2.15 |1 | | |[cran/rmcfs](https://github.com/cran/rmcfs) |
-|[rpcdsearch](problems.md#rpcdsearch) |1.0 |1 | | |[cran/rpcdsearch](https://github.com/cran/rpcdsearch) |
-|[RSSL](problems.md#rssl) |0.8 |1 | | |[cran/RSSL](https://github.com/cran/RSSL) |
-|[RtutoR](problems.md#rtutor) |1.2 |1 | | |[cran/RtutoR](https://github.com/cran/RtutoR) |
-|[RxODE](problems.md#rxode) |0.8.0-9 |1 | | |[cran/RxODE](https://github.com/cran/RxODE) |
-|[scanstatistics](problems.md#scanstatistics) |1.0.1 |1 | | |[cran/scanstatistics](https://github.com/cran/scanstatistics) |
-|[scfind](problems.md#scfind) |1.4.1 |1 | | |[cran/scfind](https://github.com/cran/scfind) |
-|[scmap](problems.md#scmap) |1.4.1 |1 | | |[cran/scmap](https://github.com/cran/scmap) |
-|[SCPME](problems.md#scpme) |1.0 |1 | | |[cran/SCPME](https://github.com/cran/SCPME) |
-|[sf](problems.md#sf) |0.7-3 |1 | | |[cran/sf](https://github.com/cran/sf) |
-|[simputation](problems.md#simputation) |0.2.2 |1 | | |[cran/simputation](https://github.com/cran/simputation) |
-|[SpaCCr](problems.md#spaccr) |0.1.0 |1 | | |[cran/SpaCCr](https://github.com/cran/SpaCCr) |
-|[TCGAbiolinks](problems.md#tcgabiolinks) |2.10.5 |1 | | |[cran/TCGAbiolinks](https://github.com/cran/TCGAbiolinks) |
-|[telefit](problems.md#telefit) |1.0.1 |1 | | |[cran/telefit](https://github.com/cran/telefit) |
-|[textmining](problems.md#textmining) |0.0.1 |1 | | |[cran/textmining](https://github.com/cran/textmining) |
-|[vapour](problems.md#vapour) |0.1.0 |1 | | |[cran/vapour](https://github.com/cran/vapour) |
-|[VarSelLCM](problems.md#varsellcm) |2.1.3 |1 | | |[cran/VarSelLCM](https://github.com/cran/VarSelLCM) |
-|[vlad](problems.md#vlad) |0.2.0 |1 | | |[cran/vlad](https://github.com/cran/vlad) |
-|[walker](problems.md#walker) |0.2.5 |1 | | |[cran/walker](https://github.com/cran/walker) |
-|[wand](problems.md#wand) |0.2.0 |1 | | |[cran/wand](https://github.com/cran/wand) |
-|[weibulltools](problems.md#weibulltools) |1.0.1 |1 | | |[cran/weibulltools](https://github.com/cran/weibulltools) |
+|package |version |error |warning |note |
+|:--------------------------------------|:---------|:---------|:-------|:----|
+|ACDm |1.0.4 |1 | | |
+|ADMMsigma |2.1 |1 | | |
+|airGR |1.2.13.16 |1 | | |
+|BAS |1.5.3 |1 | | |
+|BgeeDB |2.8.0 |1 | | |
+|BMTME |1.0.6 |1 | | |
+|BradleyTerryScalable |0.1.0 |1 | | |
+|brunnermunzel |1.3.3 |1 | | |
+|bsam |1.1.2 |1 | | |
+|CaseBasedReasoning |0.1 |1 | | |
+|CB2 |1.1 |1 | | |
+|circumplex |0.3.0 |1 | | |
+|classyfireR |0.2.0 |2 | | |
+|CNPBayes |1.12.0 |1 | | |
+|CollapsABEL |0.10.11 |1 | | |
+|colorednoise |1.0.4 |1 | | |
+|COMPASS |1.20.1 |1 | |1 |
+|Countr |3.5.2 |1 | | |
+|cpr |0.2.3 |1 | | |
+|crawl |2.2.1 |1 | | |
+|DataVisualizations |1.1.6 |1 | | |
+|DepthProc |2.1.1 |1 | | |
+|dialr |0.2.1 |1 | | |
+|DiffBind |2.10.0 |1 | |1 |
+|DiversityOccupancy |1.0.6 |1 | | |
+|dtwclust |5.5.2 |1 | | |
+|dynfrail |0.5.2 |1 | | |
+|exuber |0.2.1 |1 | | |
+|fastLink |0.5.0 |1 | | |
+|FindMyFriends |1.12.0 |1 |1 |2 |
+|fourierin |0.2.4 |1 | | |
+|FSelectorRcpp |0.3.1 |1 | |1 |
+|GenomicMating |2.0 |1 | | |
+|ggstatsplot |? | | | |
+|goldi |1.0.1 |1 | | |
+|graphicalVAR |0.2.2 |1 | | |
+|grasp2db |1.1.0 |1 |3 |4 |
+|heatwaveR |0.3.6 |1 | | |
+|HPAanalyze |1.0.0 |1 | | |
+|iCNV |1.2.1 |1 | | |
+|idefix |0.3.3 |1 | | |
+|ijtiff |1.5.0 |1 | | |
+|iRF |2.0.0 |1 | | |
+|IrisSpatialFeatures |1.3.0 |1 | | |
+|lilikoi |0.1.0 |1 | | |
+|LLSR |0.0.2.19 |1 | | |
+|lpirfs |0.1.5 |1 | | |
+|mbgraphic |1.0.1 |1 | | |
+|miceFast |0.2.3 |1 | | |
+|mleap |0.1.3 |1 | | |
+|momentuHMM |1.4.3 |1 | | |
+|[MonetDBLite](failures.md#monetdblite) |0.6.0 |-1 __+1__ | |1 |
+|morse |3.2.2 |1 | | |
+|mrgsolve |0.9.0 |1 | | |
+|multiHiCcompare |1.0.0 |1 | | |
+|nlmixr |1.0.0-7 |1 | | |
+|openair |2.6-5 |1 | | |
+|pccc |1.0.2 |1 | | |
+|[perturbatr](failures.md#perturbatr) |1.2.1 |__+1__ | | |
+|petro.One |0.2.3 |1 | | |
+|phase1PRMD |1.0.1 |1 | | |
+|phenofit |0.2.0 |1 | | |
+|poppr |2.8.2 |1 | | |
+|PPforest |0.1.1 |1 | | |
+|pRoloc |1.22.2 |1 | |1 |
+|qdap |2.3.2 |1 | | |
+|quanteda |1.4.3 |1 | | |
+|quokar |0.1.0 |1 | | |
+|qwraps2 |0.4.1 |1 | | |
+|Rdrools |1.1.1 |1 | | |
+|resautonet |1.0 |1 | | |
+|RGMQL |1.2.0 |1 | | |
+|rmcfs |1.2.15 |1 | | |
+|rpcdsearch |1.0 |1 | | |
+|RSSL |0.8 |1 | | |
+|RtutoR |1.2 |1 | | |
+|RxODE |0.8.0-9 |1 | | |
+|sarima |0.8.0 |1 | | |
+|scanstatistics |1.0.1 |1 | | |
+|scfind |1.4.1 |1 | | |
+|scmap |1.4.1 |1 | | |
+|SCPME |1.0 |1 | | |
+|sf |0.7-4 |1 | | |
+|simputation |0.2.2 |1 | | |
+|SpaCCr |0.1.0 |1 | | |
+|TCGAbiolinks |2.10.5 |1 | |1 |
+|telefit |1.0.1 |1 | | |
+|textmining |0.0.1 |1 | | |
+|vapour |0.2.0 |1 | | |
+|VarSelLCM |2.1.3 |1 | | |
+|vlad |0.2.0 |1 | | |
+|walker |0.2.5 |1 | | |
+|wand |0.2.0 |1 | | |
+|weibulltools |1.0.1 |1 | | |
+|XBSeq |1.14.1 |1 | |2 |
-## Broken (23)
+## New problems (26)
-|package |version |error |warning |note |source |
-|:------------------------------------------------------|:-------|:------|:-------|:--------|:-----------------------------------------------------------------------|
-|[banR](problems.md#banr) |0.2.0 |__+1__ |-1 |1 |[cran/banR](https://github.com/cran/banR) |
-|[Cardinal](problems.md#cardinal) |2.0.4 | |1 |1 __+1__ |[cran/Cardinal](https://github.com/cran/Cardinal) |
-|[CluMP](problems.md#clump) |0.7.1 |__+1__ | | |[cran/CluMP](https://github.com/cran/CluMP) |
-|[compareDF](problems.md#comparedf) |1.7.2 |__+1__ | |1 |[cran/compareDF](https://github.com/cran/compareDF) |
-|[corrr](problems.md#corrr) |0.3.1 | |__+1__ | |[cran/corrr](https://github.com/cran/corrr) |
-|[cytominer](problems.md#cytominer) |0.1.0 |__+1__ | | |[cran/cytominer](https://github.com/cran/cytominer) |
-|[dbplyr](problems.md#dbplyr) |1.3.0 |__+1__ | | |[cran/dbplyr](https://github.com/cran/dbplyr) |
-|[FindMyFriends](problems.md#findmyfriends) |1.12.0 |1 |1 |2 |[cran/FindMyFriends](https://github.com/cran/FindMyFriends) |
-|[GEOmetadb](problems.md#geometadb) |1.44.0 |1 | |2 |[cran/GEOmetadb](https://github.com/cran/GEOmetadb) |
-|[grasp2db](problems.md#grasp2db) |1.1.0 |1 |3 |4 |[cran/grasp2db](https://github.com/cran/grasp2db) |
-|[HTSSIP](problems.md#htssip) |1.4.0 |1 | |1 |[cran/HTSSIP](https://github.com/cran/HTSSIP) |
-|[InjurySeverityScore](problems.md#injuryseverityscore) |0.0.0.1 |__+1__ | | |[cran/InjurySeverityScore](https://github.com/cran/InjurySeverityScore) |
-|[IrisSpatialFeatures](problems.md#irisspatialfeatures) |1.3.0 |1 | | |[cran/IrisSpatialFeatures](https://github.com/cran/IrisSpatialFeatures) |
-|[modeldb](problems.md#modeldb) |0.1.2 | |__+1__ | |[cran/modeldb](https://github.com/cran/modeldb) |
-|[MonetDBLite](problems.md#monetdblite) |0.6.0 |1 | |1 |[cran/MonetDBLite](https://github.com/cran/MonetDBLite) |
-|[pammtools](problems.md#pammtools) |0.1.9 |__+1__ | | |[cran/pammtools](https://github.com/cran/pammtools) |
-|[perturbatr](problems.md#perturbatr) |1.2.1 |__+1__ | | |[cran/perturbatr](https://github.com/cran/perturbatr) |
-|[pmc](problems.md#pmc) |1.0.3 |1 | | |[cran/pmc](https://github.com/cran/pmc) |
-|[rubias](problems.md#rubias) |0.2.0 |1 | |1 |[cran/rubias](https://github.com/cran/rubias) |
-|[ruler](problems.md#ruler) |0.2.0 |__+2__ | | |[cran/ruler](https://github.com/cran/ruler) |
-|[spdplyr](problems.md#spdplyr) |0.2.0 |__+2__ | | |[cran/spdplyr](https://github.com/cran/spdplyr) |
-|[strapgod](problems.md#strapgod) |0.0.1 |__+1__ | | |[cran/strapgod](https://github.com/cran/strapgod) |
-|[XBSeq](problems.md#xbseq) |1.14.1 |1 | |2 |[cran/XBSeq](https://github.com/cran/XBSeq) |
+|package |version |error |warning |note |
+|:------------------------------------------------------|:-------|:------|:-------|:--------|
+|[benthos](problems.md#benthos) |1.3-6 | |__+1__ | |
+|[bomrang](problems.md#bomrang) |0.5.0 | |__+1__ | |
+|[bupaR](problems.md#bupar) |0.4.2 | |__+1__ | |
+|[Cardinal](problems.md#cardinal) |2.0.4 | |1 |1 __+1__ |
+|[CluMP](problems.md#clump) |0.7.1 |__+1__ | | |
+|[compareDF](problems.md#comparedf) |1.7.2 |__+1__ | |1 |
+|[edeaR](problems.md#edear) |0.8.2 | |__+1__ | |
+|[heuristicsmineR](problems.md#heuristicsminer) |0.2.0 | |__+1__ |1 |
+|[IAT](problems.md#iat) |0.3 | |__+1__ | |
+|[idealstan](problems.md#idealstan) |0.7.1 | |__+1__ |2 |
+|[INDperform](problems.md#indperform) |0.2.0 |1 | |1 __+1__ |
+|[InjurySeverityScore](problems.md#injuryseverityscore) |0.0.0.1 |__+1__ | | |
+|[lans2r](problems.md#lans2r) |1.0.5 | |__+1__ | |
+|[MSstatsTMT](problems.md#msstatstmt) |1.1.2 | |__+1__ | |
+|[networkreporting](problems.md#networkreporting) |0.1.1 | |__+1__ | |
+|[nonmemica](problems.md#nonmemica) |0.9.0 | |__+1__ | |
+|[processmapR](problems.md#processmapr) |0.3.3 | |__+1__ | |
+|[ruler](problems.md#ruler) |0.2.0 |__+2__ | | |
+|[seplyr](problems.md#seplyr) |0.8.3 |__+1__ | | |
+|[socviz](problems.md#socviz) |1.0.0 | | |__+1__ |
+|[spdplyr](problems.md#spdplyr) |0.2.0 |__+2__ | | |
+|[strapgod](problems.md#strapgod) |0.0.1 |__+1__ | | |
+|[summariser](problems.md#summariser) |0.1.0 | |__+1__ | |
+|[tbl2xts](problems.md#tbl2xts) |0.1.2 | |__+1__ |1 |
+|[TPP](problems.md#tpp) |3.10.1 | |__+1__ |3 |
+|[xesreadR](problems.md#xesreadr) |0.2.3 | |__+1__ | |
diff --git a/revdep/failures.md b/revdep/failures.md
new file mode 100644
index 0000000000..ba6ae889a3
--- /dev/null
+++ b/revdep/failures.md
@@ -0,0 +1,12102 @@
+# ACDm
+
+
+
+* Version: 1.0.4
+* Source code: https://github.com/cran/ACDm
+* Date/Publication: 2016-07-16 12:19:03
+* Number of recursive dependencies: 69
+
+Run `revdep_details(,"ACDm")` for more info
+
+
+
+## In both
+
+* checking whether package ‘ACDm’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/ACDm/new/ACDm.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘ACDm’ ...
+** package ‘ACDm’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c computeDurations.c -o computeDurations.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c getLL.c -o getLL.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c getScore.c -o getScore.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c getdudtheta.c -o getdudtheta.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c sim_ABACD.c -o sim_ABACD.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c sim_ACDCALL.c -o sim_ACDCALL.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c sim_ACDSpline.c -o sim_ACDSpline.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c sim_AMACD.c -o sim_AMACD.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c sim_LACD1.c -o sim_LACD1.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c sim_LACD2.c -o sim_LACD2.o
+clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o ACDm.so computeDurations.o getLL.o getScore.o getdudtheta.o sim_ABACD.o sim_ACDCALL.o sim_ACDSpline.o sim_AMACD.o sim_LACD1.o sim_LACD2.o -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [ACDm.so] Error 1
+ERROR: compilation failed for package ‘ACDm’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/ACDm/new/ACDm.Rcheck/ACDm’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘ACDm’ ...
+** package ‘ACDm’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c computeDurations.c -o computeDurations.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c getLL.c -o getLL.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c getScore.c -o getScore.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c getdudtheta.c -o getdudtheta.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c sim_ABACD.c -o sim_ABACD.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c sim_ACDCALL.c -o sim_ACDCALL.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c sim_ACDSpline.c -o sim_ACDSpline.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c sim_AMACD.c -o sim_AMACD.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c sim_LACD1.c -o sim_LACD1.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c sim_LACD2.c -o sim_LACD2.o
+clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o ACDm.so computeDurations.o getLL.o getScore.o getdudtheta.o sim_ABACD.o sim_ACDCALL.o sim_ACDSpline.o sim_AMACD.o sim_LACD1.o sim_LACD2.o -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [ACDm.so] Error 1
+ERROR: compilation failed for package ‘ACDm’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/ACDm/old/ACDm.Rcheck/ACDm’
+
+```
+# ADMMsigma
+
+
+
+* Version: 2.1
+* Source code: https://github.com/cran/ADMMsigma
+* URL: https://github.com/MGallow/ADMMsigma
+* BugReports: https://github.com/MGallow/ADMMsigma/issues
+* Date/Publication: 2018-08-02 17:10:02 UTC
+* Number of recursive dependencies: 88
+
+Run `revdep_details(,"ADMMsigma")` for more info
+
+
+
+## In both
+
+* checking whether package ‘ADMMsigma’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/ADMMsigma/new/ADMMsigma.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘ADMMsigma’ ...
+** package ‘ADMMsigma’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/ADMMsigma/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/ADMMsigma/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/ADMMsigma/RcppProgress/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c CV.cpp -o CV.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/ADMMsigma/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/ADMMsigma/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/ADMMsigma/RcppProgress/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c CVP.cpp -o CVP.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/ADMMsigma/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/ADMMsigma/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/ADMMsigma/RcppProgress/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c RcppExports.cpp -o RcppExports.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/ADMMsigma/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/ADMMsigma/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/ADMMsigma/RcppProgress/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c Sigma.cpp -o Sigma.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/ADMMsigma/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/ADMMsigma/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/ADMMsigma/RcppProgress/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c soft.cpp -o soft.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o ADMMsigma.so CV.o CVP.o RcppExports.o Sigma.o soft.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [ADMMsigma.so] Error 1
+ERROR: compilation failed for package ‘ADMMsigma’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/ADMMsigma/new/ADMMsigma.Rcheck/ADMMsigma’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘ADMMsigma’ ...
+** package ‘ADMMsigma’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/ADMMsigma/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/ADMMsigma/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/ADMMsigma/RcppProgress/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c CV.cpp -o CV.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/ADMMsigma/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/ADMMsigma/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/ADMMsigma/RcppProgress/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c CVP.cpp -o CVP.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/ADMMsigma/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/ADMMsigma/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/ADMMsigma/RcppProgress/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c RcppExports.cpp -o RcppExports.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/ADMMsigma/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/ADMMsigma/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/ADMMsigma/RcppProgress/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c Sigma.cpp -o Sigma.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/ADMMsigma/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/ADMMsigma/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/ADMMsigma/RcppProgress/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c soft.cpp -o soft.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o ADMMsigma.so CV.o CVP.o RcppExports.o Sigma.o soft.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [ADMMsigma.so] Error 1
+ERROR: compilation failed for package ‘ADMMsigma’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/ADMMsigma/old/ADMMsigma.Rcheck/ADMMsigma’
+
+```
+# airGR
+
+
+
+* Version: 1.2.13.16
+* Source code: https://github.com/cran/airGR
+* URL: https://hydrogr.github.io/airGR/
+* Date/Publication: 2019-04-03 14:50:03 UTC
+* Number of recursive dependencies: 100
+
+Run `revdep_details(,"airGR")` for more info
+
+
+
+## In both
+
+* checking whether package ‘airGR’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/airGR/new/airGR.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘airGR’ ...
+** package ‘airGR’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c airGR.c -o airGR.o
+gfortran -fPIC -Wall -g -O2 -c frun_CEMANEIGE.f -o frun_CEMANEIGE.o
+gfortran -fPIC -Wall -g -O2 -c frun_GR1A.f -o frun_GR1A.o
+gfortran -fPIC -Wall -g -O2 -c frun_GR2M.f -o frun_GR2M.o
+gfortran -fPIC -Wall -g -O2 -c frun_GR4H.f -o frun_GR4H.o
+gfortran -fPIC -Wall -g -O2 -c frun_GR4J.f -o frun_GR4J.o
+gfortran -fPIC -Wall -g -O2 -c frun_GR5J.f -o frun_GR5J.o
+gfortran -fPIC -Wall -g -O2 -c frun_GR6J.f -o frun_GR6J.o
+gfortran -fPIC -Wall -g -O2 -c utils_D.f -o utils_D.o
+gfortran -fPIC -Wall -g -O2 -c utils_H.f -o utils_H.o
+clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o airGR.so airGR.o frun_CEMANEIGE.o frun_GR1A.o frun_GR2M.o frun_GR4H.o frun_GR4J.o frun_GR5J.o frun_GR6J.o utils_D.o utils_H.o -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [airGR.so] Error 1
+ERROR: compilation failed for package ‘airGR’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/airGR/new/airGR.Rcheck/airGR’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘airGR’ ...
+** package ‘airGR’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c airGR.c -o airGR.o
+gfortran -fPIC -Wall -g -O2 -c frun_CEMANEIGE.f -o frun_CEMANEIGE.o
+gfortran -fPIC -Wall -g -O2 -c frun_GR1A.f -o frun_GR1A.o
+gfortran -fPIC -Wall -g -O2 -c frun_GR2M.f -o frun_GR2M.o
+gfortran -fPIC -Wall -g -O2 -c frun_GR4H.f -o frun_GR4H.o
+gfortran -fPIC -Wall -g -O2 -c frun_GR4J.f -o frun_GR4J.o
+gfortran -fPIC -Wall -g -O2 -c frun_GR5J.f -o frun_GR5J.o
+gfortran -fPIC -Wall -g -O2 -c frun_GR6J.f -o frun_GR6J.o
+gfortran -fPIC -Wall -g -O2 -c utils_D.f -o utils_D.o
+gfortran -fPIC -Wall -g -O2 -c utils_H.f -o utils_H.o
+clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o airGR.so airGR.o frun_CEMANEIGE.o frun_GR1A.o frun_GR2M.o frun_GR4H.o frun_GR4J.o frun_GR5J.o frun_GR6J.o utils_D.o utils_H.o -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [airGR.so] Error 1
+ERROR: compilation failed for package ‘airGR’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/airGR/old/airGR.Rcheck/airGR’
+
+```
+# BAS
+
+
+
+* Version: 1.5.3
+* Source code: https://github.com/cran/BAS
+* URL: https://www.r-project.org, https://github.com/merliseclyde/BAS
+* BugReports: https://github.com/merliseclyde/BAS/issues
+* Date/Publication: 2018-10-30 10:40:14 UTC
+* Number of recursive dependencies: 88
+
+Run `revdep_details(,"BAS")` for more info
+
+
+
+## In both
+
+* checking whether package ‘BAS’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/BAS/new/BAS.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘BAS’ ...
+** package ‘BAS’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c E_ZS.c -o E_ZS.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c ZS_approx_full_np.c -o ZS_approx_full_np.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c ZS_approx_null_np.c -o ZS_approx_null_np.o
+ZS_approx_null_np.c:27:7: warning: unused variable 'i' [-Wunused-variable]
+ int i;
+ ^
+1 warning generated.
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c bayesglm.c -o bayesglm.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c bayesreg.c -o bayesreg.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c betapriorfamily.c -o betapriorfamily.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c cch.c -o cch.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c const.c -o const.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c family.c -o family.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c gamma.c -o gamma.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c glm_deterministic.c -o glm_deterministic.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c glm_fit.c -o glm_fit.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c glm_lpy.c -o glm_lpy.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c glm_mcmc.c -o glm_mcmc.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c glm_mcmcbas.c -o glm_mcmcbas.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c glm_sampleworep.c -o glm_sampleworep.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c hg_approx_null_np.c -o hg_approx_null_np.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c hyp2f1.c -o hyp2f1.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c hyperg.c -o hyperg.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c hypergeoF.c -o hypergeoF.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c hypergeometric1F1.c -o hypergeometric1F1.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c init.c -o init.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c lm_deterministic.c -o lm_deterministic.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c lm_mcmc.c -o lm_mcmc.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c lm_mcmcbas.c -o lm_mcmcbas.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c lm_sampleworep.c -o lm_sampleworep.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c mem.c -o mem.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c model_probabilities.c -o model_probabilities.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c mtherr.c -o mtherr.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c polevl.c -o polevl.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c psi.c -o psi.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c tree_structures.c -o tree_structures.o
+clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o BAS.so E_ZS.o ZS_approx_full_np.o ZS_approx_null_np.o bayesglm.o bayesreg.o betapriorfamily.o cch.o const.o family.o gamma.o glm_deterministic.o glm_fit.o glm_lpy.o glm_mcmc.o glm_mcmcbas.o glm_sampleworep.o hg_approx_null_np.o hyp2f1.o hyperg.o hypergeoF.o hypergeometric1F1.o init.o lm_deterministic.o lm_mcmc.o lm_mcmcbas.o lm_sampleworep.o mem.o model_probabilities.o mtherr.o polevl.o psi.o tree_structures.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [BAS.so] Error 1
+ERROR: compilation failed for package ‘BAS’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/BAS/new/BAS.Rcheck/BAS’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘BAS’ ...
+** package ‘BAS’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c E_ZS.c -o E_ZS.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c ZS_approx_full_np.c -o ZS_approx_full_np.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c ZS_approx_null_np.c -o ZS_approx_null_np.o
+ZS_approx_null_np.c:27:7: warning: unused variable 'i' [-Wunused-variable]
+ int i;
+ ^
+1 warning generated.
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c bayesglm.c -o bayesglm.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c bayesreg.c -o bayesreg.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c betapriorfamily.c -o betapriorfamily.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c cch.c -o cch.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c const.c -o const.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c family.c -o family.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c gamma.c -o gamma.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c glm_deterministic.c -o glm_deterministic.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c glm_fit.c -o glm_fit.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c glm_lpy.c -o glm_lpy.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c glm_mcmc.c -o glm_mcmc.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c glm_mcmcbas.c -o glm_mcmcbas.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c glm_sampleworep.c -o glm_sampleworep.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c hg_approx_null_np.c -o hg_approx_null_np.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c hyp2f1.c -o hyp2f1.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c hyperg.c -o hyperg.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c hypergeoF.c -o hypergeoF.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c hypergeometric1F1.c -o hypergeometric1F1.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c init.c -o init.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c lm_deterministic.c -o lm_deterministic.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c lm_mcmc.c -o lm_mcmc.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c lm_mcmcbas.c -o lm_mcmcbas.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c lm_sampleworep.c -o lm_sampleworep.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c mem.c -o mem.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c model_probabilities.c -o model_probabilities.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c mtherr.c -o mtherr.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c polevl.c -o polevl.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c psi.c -o psi.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c tree_structures.c -o tree_structures.o
+clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o BAS.so E_ZS.o ZS_approx_full_np.o ZS_approx_null_np.o bayesglm.o bayesreg.o betapriorfamily.o cch.o const.o family.o gamma.o glm_deterministic.o glm_fit.o glm_lpy.o glm_mcmc.o glm_mcmcbas.o glm_sampleworep.o hg_approx_null_np.o hyp2f1.o hyperg.o hypergeoF.o hypergeometric1F1.o init.o lm_deterministic.o lm_mcmc.o lm_mcmcbas.o lm_sampleworep.o mem.o model_probabilities.o mtherr.o polevl.o psi.o tree_structures.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [BAS.so] Error 1
+ERROR: compilation failed for package ‘BAS’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/BAS/old/BAS.Rcheck/BAS’
+
+```
+# BgeeDB
+
+
+
+* Version: 2.8.0
+* Source code: https://github.com/cran/BgeeDB
+* URL: https://github.com/BgeeDB/BgeeDB_R
+* BugReports: https://github.com/BgeeDB/BgeeDB_R/issues
+* Date/Publication: 2018-10-30
+* Number of recursive dependencies: 61
+
+Run `revdep_details(,"BgeeDB")` for more info
+
+
+
+## In both
+
+* checking whether package ‘BgeeDB’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/BgeeDB/new/BgeeDB.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘BgeeDB’ ...
+** using staged installation
+** R
+** data
+** inst
+** byte-compile and prepare package for lazy loading
+Error: package ‘GO.db’ required by ‘topGO’ could not be found
+Execution halted
+ERROR: lazy loading failed for package ‘BgeeDB’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/BgeeDB/new/BgeeDB.Rcheck/BgeeDB’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘BgeeDB’ ...
+** using staged installation
+** R
+** data
+** inst
+** byte-compile and prepare package for lazy loading
+Error: package ‘GO.db’ required by ‘topGO’ could not be found
+Execution halted
+ERROR: lazy loading failed for package ‘BgeeDB’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/BgeeDB/old/BgeeDB.Rcheck/BgeeDB’
+
+```
+# BMTME
+
+
+
+* Version: 1.0.6
+* Source code: https://github.com/cran/BMTME
+* URL: https://github.com/frahik/BMTME
+* BugReports: https://github.com/frahik/BMTME/issues/new
+* Date/Publication: 2019-02-12 09:47:42 UTC
+* Number of recursive dependencies: 58
+
+Run `revdep_details(,"BMTME")` for more info
+
+
+
+## In both
+
+* checking whether package ‘BMTME’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/BMTME/new/BMTME.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘BMTME’ ...
+** package ‘BMTME’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/BMTME/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/BMTME/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -L"/Library/Frameworks/R.framework/Resources/lib" -lRlapack -L"/Library/Frameworks/R.framework/Resources/lib" -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -fPIC -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o
+clang: warning: -lRlapack: 'linker' input unused [-Wunused-command-line-argument]
+clang: warning: -lRblas: 'linker' input unused [-Wunused-command-line-argument]
+clang: warning: -lgfortran: 'linker' input unused [-Wunused-command-line-argument]
+clang: warning: -lquadmath: 'linker' input unused [-Wunused-command-line-argument]
+clang: warning: -lm: 'linker' input unused [-Wunused-command-line-argument]
+clang: warning: argument unused during compilation: '-L/Library/Frameworks/R.framework/Resources/lib' [-Wunused-command-line-argument]
+clang: warning: argument unused during compilation: '-L/Library/Frameworks/R.framework/Resources/lib' [-Wunused-command-line-argument]
+clang: warning: argument unused during compilation: '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0' [-Wunused-command-line-argument]
+clang: warning: argument unused during compilation: '-L/usr/local/gfortran/lib' [-Wunused-command-line-argument]
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/BMTME/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/BMTME/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -L"/Library/Frameworks/R.framework/Resources/lib" -lRlapack -L"/Library/Frameworks/R.framework/Resources/lib" -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -fPIC -Wall -g -O2 -c Sample_IW.cpp -o Sample_IW.o
+clang: warning: -lRlapack: 'linker' input unused [-Wunused-command-line-argument]
+clang: warning: -lRblas: 'linker' input unused [-Wunused-command-line-argument]
+clang: warning: -lgfortran: 'linker' input unused [-Wunused-command-line-argument]
+clang: warning: -lquadmath: 'linker' input unused [-Wunused-command-line-argument]
+clang: warning: -lm: 'linker' input unused [-Wunused-command-line-argument]
+clang: warning: argument unused during compilation: '-L/Library/Frameworks/R.framework/Resources/lib' [-Wunused-command-line-argument]
+clang: warning: argument unused during compilation: '-L/Library/Frameworks/R.framework/Resources/lib' [-Wunused-command-line-argument]
+clang: warning: argument unused during compilation: '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0' [-Wunused-command-line-argument]
+clang: warning: argument unused during compilation: '-L/usr/local/gfortran/lib' [-Wunused-command-line-argument]
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o BMTME.so RcppExports.o Sample_IW.o -lstdc++ -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [BMTME.so] Error 1
+ERROR: compilation failed for package ‘BMTME’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/BMTME/new/BMTME.Rcheck/BMTME’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘BMTME’ ...
+** package ‘BMTME’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/BMTME/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/BMTME/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -L"/Library/Frameworks/R.framework/Resources/lib" -lRlapack -L"/Library/Frameworks/R.framework/Resources/lib" -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -fPIC -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o
+clang: warning: -lRlapack: 'linker' input unused [-Wunused-command-line-argument]
+clang: warning: -lRblas: 'linker' input unused [-Wunused-command-line-argument]
+clang: warning: -lgfortran: 'linker' input unused [-Wunused-command-line-argument]
+clang: warning: -lquadmath: 'linker' input unused [-Wunused-command-line-argument]
+clang: warning: -lm: 'linker' input unused [-Wunused-command-line-argument]
+clang: warning: argument unused during compilation: '-L/Library/Frameworks/R.framework/Resources/lib' [-Wunused-command-line-argument]
+clang: warning: argument unused during compilation: '-L/Library/Frameworks/R.framework/Resources/lib' [-Wunused-command-line-argument]
+clang: warning: argument unused during compilation: '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0' [-Wunused-command-line-argument]
+clang: warning: argument unused during compilation: '-L/usr/local/gfortran/lib' [-Wunused-command-line-argument]
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/BMTME/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/BMTME/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -L"/Library/Frameworks/R.framework/Resources/lib" -lRlapack -L"/Library/Frameworks/R.framework/Resources/lib" -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -fPIC -Wall -g -O2 -c Sample_IW.cpp -o Sample_IW.o
+clang: warning: -lRlapack: 'linker' input unused [-Wunused-command-line-argument]
+clang: warning: -lRblas: 'linker' input unused [-Wunused-command-line-argument]
+clang: warning: -lgfortran: 'linker' input unused [-Wunused-command-line-argument]
+clang: warning: -lquadmath: 'linker' input unused [-Wunused-command-line-argument]
+clang: warning: -lm: 'linker' input unused [-Wunused-command-line-argument]
+clang: warning: argument unused during compilation: '-L/Library/Frameworks/R.framework/Resources/lib' [-Wunused-command-line-argument]
+clang: warning: argument unused during compilation: '-L/Library/Frameworks/R.framework/Resources/lib' [-Wunused-command-line-argument]
+clang: warning: argument unused during compilation: '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0' [-Wunused-command-line-argument]
+clang: warning: argument unused during compilation: '-L/usr/local/gfortran/lib' [-Wunused-command-line-argument]
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o BMTME.so RcppExports.o Sample_IW.o -lstdc++ -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [BMTME.so] Error 1
+ERROR: compilation failed for package ‘BMTME’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/BMTME/old/BMTME.Rcheck/BMTME’
+
+```
+# BradleyTerryScalable
+
+
+
+* Version: 0.1.0
+* Source code: https://github.com/cran/BradleyTerryScalable
+* URL: https://github.com/EllaKaye/BradleyTerryScalable
+* BugReports: https://github.com/EllaKaye/BradleyTerryScalable/issues
+* Date/Publication: 2017-06-29 22:39:23 UTC
+* Number of recursive dependencies: 54
+
+Run `revdep_details(,"BradleyTerryScalable")` for more info
+
+
+
+## In both
+
+* checking whether package ‘BradleyTerryScalable’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/BradleyTerryScalable/new/BradleyTerryScalable.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘BradleyTerryScalable’ ...
+** package ‘BradleyTerryScalable’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/BradleyTerryScalable/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/BradleyTerryScalable/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c BT_EM_arma_SBT.cpp -o BT_EM_arma_SBT.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/BradleyTerryScalable/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/BradleyTerryScalable/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c ILSR_arma.cpp -o ILSR_arma.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/BradleyTerryScalable/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/BradleyTerryScalable/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c RcppExports.cpp -o RcppExports.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/BradleyTerryScalable/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/BradleyTerryScalable/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c btprob_vec.cpp -o btprob_vec.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o BradleyTerryScalable.so BT_EM_arma_SBT.o ILSR_arma.o RcppExports.o btprob_vec.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [BradleyTerryScalable.so] Error 1
+ERROR: compilation failed for package ‘BradleyTerryScalable’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/BradleyTerryScalable/new/BradleyTerryScalable.Rcheck/BradleyTerryScalable’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘BradleyTerryScalable’ ...
+** package ‘BradleyTerryScalable’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/BradleyTerryScalable/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/BradleyTerryScalable/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c BT_EM_arma_SBT.cpp -o BT_EM_arma_SBT.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/BradleyTerryScalable/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/BradleyTerryScalable/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c ILSR_arma.cpp -o ILSR_arma.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/BradleyTerryScalable/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/BradleyTerryScalable/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c RcppExports.cpp -o RcppExports.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/BradleyTerryScalable/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/BradleyTerryScalable/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c btprob_vec.cpp -o btprob_vec.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o BradleyTerryScalable.so BT_EM_arma_SBT.o ILSR_arma.o RcppExports.o btprob_vec.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [BradleyTerryScalable.so] Error 1
+ERROR: compilation failed for package ‘BradleyTerryScalable’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/BradleyTerryScalable/old/BradleyTerryScalable.Rcheck/BradleyTerryScalable’
+
+```
+# brunnermunzel
+
+
+
+* Version: 1.3.3
+* Source code: https://github.com/cran/brunnermunzel
+* URL: https://github.com/toshi-ara/brunnermunzel
+* BugReports: https://github.com/toshi-ara/brunnermunzel/issues/
+* Date/Publication: 2019-04-10 11:15:20 UTC
+* Number of recursive dependencies: 52
+
+Run `revdep_details(,"brunnermunzel")` for more info
+
+
+
+## In both
+
+* checking whether package ‘brunnermunzel’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/brunnermunzel/new/brunnermunzel.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘brunnermunzel’ ...
+** package ‘brunnermunzel’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c Rf_wrapper.c -o Rf_wrapper.o
+gfortran -fPIC -Wall -g -O2 -c bm_permutation_stat.f -o bm_permutation_stat.o
+gfortran -fPIC -Wall -g -O2 -c bm_permutation_test.f -o bm_permutation_test.o
+gfortran -fPIC -Wall -g -O2 -c bm_test.f -o bm_test.o
+gfortran -fPIC -Wall -g -O2 -c calc_statistics.f -o calc_statistics.o
+gfortran -fPIC -Wall -g -O2 -c combination.f -o combination.o
+gfortran -fPIC -Wall -g -O2 -c divide_groups.f -o divide_groups.o
+gfortran -fPIC -Wall -g -O2 -c rank.f -o rank.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c registerDynamicSymbol.c -o registerDynamicSymbol.o
+clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o brunnermunzel.so Rf_wrapper.o bm_permutation_stat.o bm_permutation_test.o bm_test.o calc_statistics.o combination.o divide_groups.o rank.o registerDynamicSymbol.o -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [brunnermunzel.so] Error 1
+ERROR: compilation failed for package ‘brunnermunzel’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/brunnermunzel/new/brunnermunzel.Rcheck/brunnermunzel’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘brunnermunzel’ ...
+** package ‘brunnermunzel’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c Rf_wrapper.c -o Rf_wrapper.o
+gfortran -fPIC -Wall -g -O2 -c bm_permutation_stat.f -o bm_permutation_stat.o
+gfortran -fPIC -Wall -g -O2 -c bm_permutation_test.f -o bm_permutation_test.o
+gfortran -fPIC -Wall -g -O2 -c bm_test.f -o bm_test.o
+gfortran -fPIC -Wall -g -O2 -c calc_statistics.f -o calc_statistics.o
+gfortran -fPIC -Wall -g -O2 -c combination.f -o combination.o
+gfortran -fPIC -Wall -g -O2 -c divide_groups.f -o divide_groups.o
+gfortran -fPIC -Wall -g -O2 -c rank.f -o rank.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c registerDynamicSymbol.c -o registerDynamicSymbol.o
+clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o brunnermunzel.so Rf_wrapper.o bm_permutation_stat.o bm_permutation_test.o bm_test.o calc_statistics.o combination.o divide_groups.o rank.o registerDynamicSymbol.o -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [brunnermunzel.so] Error 1
+ERROR: compilation failed for package ‘brunnermunzel’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/brunnermunzel/old/brunnermunzel.Rcheck/brunnermunzel’
+
+```
+# bsam
+
+
+
+* Version: 1.1.2
+* Source code: https://github.com/cran/bsam
+* URL: https://github.com/ianjonsen/bsam
+* BugReports: https://github.com/ianjonsen/bsam/issues
+* Date/Publication: 2017-07-01 02:50:50 UTC
+* Number of recursive dependencies: 48
+
+Run `revdep_details(,"bsam")` for more info
+
+
+
+## In both
+
+* checking whether package ‘bsam’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/bsam/new/bsam.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘bsam’ ...
+** package ‘bsam’ successfully unpacked and MD5 sums checked
+** using staged installation
+** R
+** data
+*** moving datasets to lazyload DB
+** inst
+** byte-compile and prepare package for lazy loading
+Error: package or namespace load failed for ‘rjags’:
+ .onLoad failed in loadNamespace() for 'rjags', details:
+ call: dyn.load(file, DLLpath = DLLpath, ...)
+ error: unable to load shared object '/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/bsam/rjags/libs/rjags.so':
+ dlopen(/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/bsam/rjags/libs/rjags.so, 10): Library not loaded: /usr/local/lib/libjags.4.dylib
+ Referenced from: /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/bsam/rjags/libs/rjags.so
+ Reason: image not found
+Error: package ‘rjags’ could not be loaded
+Execution halted
+ERROR: lazy loading failed for package ‘bsam’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/bsam/new/bsam.Rcheck/bsam’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘bsam’ ...
+** package ‘bsam’ successfully unpacked and MD5 sums checked
+** using staged installation
+** R
+** data
+*** moving datasets to lazyload DB
+** inst
+** byte-compile and prepare package for lazy loading
+Error: package or namespace load failed for ‘rjags’:
+ .onLoad failed in loadNamespace() for 'rjags', details:
+ call: dyn.load(file, DLLpath = DLLpath, ...)
+ error: unable to load shared object '/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/bsam/rjags/libs/rjags.so':
+ dlopen(/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/bsam/rjags/libs/rjags.so, 10): Library not loaded: /usr/local/lib/libjags.4.dylib
+ Referenced from: /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/bsam/rjags/libs/rjags.so
+ Reason: image not found
+Error: package ‘rjags’ could not be loaded
+Execution halted
+ERROR: lazy loading failed for package ‘bsam’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/bsam/old/bsam.Rcheck/bsam’
+
+```
+# CaseBasedReasoning
+
+
+
+* Version: 0.1
+* Source code: https://github.com/cran/CaseBasedReasoning
+* BugReports: https://github.com/sipemu/case-based-reasoning/issues
+* Date/Publication: 2018-06-12 10:34:11 UTC
+* Number of recursive dependencies: 118
+
+Run `revdep_details(,"CaseBasedReasoning")` for more info
+
+
+
+## In both
+
+* checking whether package ‘CaseBasedReasoning’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/CaseBasedReasoning/new/CaseBasedReasoning.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘CaseBasedReasoning’ ...
+** package ‘CaseBasedReasoning’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CaseBasedReasoning/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CaseBasedReasoning/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CaseBasedReasoning/RcppParallel/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CaseBasedReasoning/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CaseBasedReasoning/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CaseBasedReasoning/RcppParallel/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c distanceAPI.cpp -o distanceAPI.o
+In file included from distanceAPI.cpp:1:
+./distanceAPI.h:134:16: warning: 'rfDepthXYDistanceAPI::calc' hides overloaded virtual function [-Woverloaded-virtual]
+ virtual void calc(arma::mat& xNodeIDs, arma::mat& yNodeIDs);
+ ^
+./distanceAPI.h:121:16: note: hidden overloaded virtual function 'rfDepthDistanceAPI::calc' declared here: different number of parameters (1 vs 2)
+ virtual void calc(arma::mat& xNodeIDs);
+ ^
+In file included from distanceAPI.cpp:1:
+In file included from ./distanceAPI.h:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CaseBasedReasoning/RcppArmadillo/include/RcppArmadillo.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CaseBasedReasoning/RcppArmadillo/include/RcppArmadilloForward.h:26:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CaseBasedReasoning/Rcpp/include/RcppCommon.h:29:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CaseBasedReasoning/Rcpp/include/Rcpp/r/headers.h:59:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CaseBasedReasoning/Rcpp/include/Rcpp/platform/compiler.h:153:
+In file included from /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/include/c++/v1/unordered_map:384:
+In file included from /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/include/c++/v1/__hash_table:16:
+/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/include/c++/v1/memory:3706:5: warning: destructor called on non-final 'weightedDistance' that has virtual functions but non-virtual destructor [-Wdelete-non-virtual-dtor]
+ __data_.second().~_Tp();
+ ^
+/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/include/c++/v1/memory:3667:9: note: in instantiation of member function 'std::__1::__shared_ptr_emplace >::__on_zero_shared' requested here
+ __shared_ptr_emplace(_Alloc __a, _Args&& ...__args)
+ ^
+/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/include/c++/v1/memory:4327:26: note: in instantiation of function template specialization 'std::__1::__shared_ptr_emplace >::__shared_ptr_emplace' requested here
+ ::new(__hold2.get()) _CntrlBlk(__a2, _VSTD::forward<_Args>(__args)...);
+ ^
+/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/include/c++/v1/memory:4706:29: note: in instantiation of function template specialization 'std::__1::shared_ptr::make_shared' requested here
+ return shared_ptr<_Tp>::make_shared(_VSTD::forward<_Args>(__args)...);
+ ^
+distanceAPI.cpp:27:16: note: in instantiation of function template specialization 'std::__1::make_shared' requested here
+ dist_ = std::make_shared(dist);
+ ^
+/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/include/c++/v1/memory:3706:23: note: qualify call to silence this warning
+ __data_.second().~_Tp();
+ ^
+/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/include/c++/v1/memory:3706:5: warning: destructor called on non-final 'rangerProximity' that has virtual functions but non-virtual destructor [-Wdelete-non-virtual-dtor]
+ __data_.second().~_Tp();
+ ^
+/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/include/c++/v1/memory:3667:9: note: in instantiation of member function 'std::__1::__shared_ptr_emplace >::__on_zero_shared' requested here
+ __shared_ptr_emplace(_Alloc __a, _Args&& ...__args)
+ ^
+/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/include/c++/v1/memory:4327:26: note: in instantiation of function template specialization 'std::__1::__shared_ptr_emplace >::__shared_ptr_emplace' requested here
+ ::new(__hold2.get()) _CntrlBlk(__a2, _VSTD::forward<_Args>(__args)...);
+ ^
+/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/include/c++/v1/memory:4706:29: note: in instantiation of function template specialization 'std::__1::shared_ptr::make_shared' requested here
+ return shared_ptr<_Tp>::make_shared(_VSTD::forward<_Args>(__args)...);
+ ^
+distanceAPI.cpp:89:16: note: in instantiation of function template specialization 'std::__1::make_shared' requested here
+ dist_ = std::make_shared(dist);
+ ^
+/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/include/c++/v1/memory:3706:23: note: qualify call to silence this warning
+ __data_.second().~_Tp();
+ ^
+/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/include/c++/v1/memory:3706:5: warning: destructor called on non-final 'rfDepthDistance' that has virtual functions but non-virtual destructor [-Wdelete-non-virtual-dtor]
+ __data_.second().~_Tp();
+ ^
+/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/include/c++/v1/memory:3667:9: note: in instantiation of member function 'std::__1::__shared_ptr_emplace >::__on_zero_shared' requested here
+ __shared_ptr_emplace(_Alloc __a, _Args&& ...__args)
+ ^
+/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/include/c++/v1/memory:4327:26: note: in instantiation of function template specialization 'std::__1::__shared_ptr_emplace >::__shared_ptr_emplace' requested here
+ ::new(__hold2.get()) _CntrlBlk(__a2, _VSTD::forward<_Args>(__args)...);
+ ^
+/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/include/c++/v1/memory:4706:29: note: in instantiation of function template specialization 'std::__1::shared_ptr::make_shared' requested here
+ return shared_ptr<_Tp>::make_shared(_VSTD::forward<_Args>(__args)...);
+ ^
+distanceAPI.cpp:124:16: note: in instantiation of function template specialization 'std::__1::make_shared' requested here
+ dist_ = std::make_shared(dist);
+ ^
+/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/include/c++/v1/memory:3706:23: note: qualify call to silence this warning
+ __data_.second().~_Tp();
+ ^
+4 warnings generated.
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CaseBasedReasoning/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CaseBasedReasoning/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CaseBasedReasoning/RcppParallel/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c distances.cpp -o distances.o
+In file included from distances.cpp:4:
+./distanceAPI.h:134:16: warning: 'rfDepthXYDistanceAPI::calc' hides overloaded virtual function [-Woverloaded-virtual]
+ virtual void calc(arma::mat& xNodeIDs, arma::mat& yNodeIDs);
+ ^
+./distanceAPI.h:121:16: note: hidden overloaded virtual function 'rfDepthDistanceAPI::calc' declared here: different number of parameters (1 vs 2)
+ virtual void calc(arma::mat& xNodeIDs);
+ ^
+1 warning generated.
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CaseBasedReasoning/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CaseBasedReasoning/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CaseBasedReasoning/RcppParallel/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c kNN.cpp -o kNN.o
+kNN.cpp:25:19: warning: 'sort_index >' is deprecated [-Wdeprecated-declarations]
+ order = arma::sort_index(tmpDist, sortDirection);
+ ^
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CaseBasedReasoning/RcppArmadillo/include/armadillo_bits/fn_sort_index.hpp:40:1: note: 'sort_index >' has been explicitly marked deprecated here
+arma_deprecated
+^
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CaseBasedReasoning/RcppArmadillo/include/armadillo_bits/compiler_setup.hpp:291:44: note: expanded from macro 'arma_deprecated'
+ #define arma_deprecated __attribute__((__deprecated__))
+ ^
+1 warning generated.
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CaseBasedReasoning/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CaseBasedReasoning/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CaseBasedReasoning/RcppParallel/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c order.cpp -o order.o
+order.cpp:26:21: warning: 'sort_index >' is deprecated [-Wdeprecated-declarations]
+ order = arma::sort_index(x_.col(i), sortDirection_);
+ ^
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CaseBasedReasoning/RcppArmadillo/include/armadillo_bits/fn_sort_index.hpp:40:1: note: 'sort_index >' has been explicitly marked deprecated here
+arma_deprecated
+^
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CaseBasedReasoning/RcppArmadillo/include/armadillo_bits/compiler_setup.hpp:291:44: note: expanded from macro 'arma_deprecated'
+ #define arma_deprecated __attribute__((__deprecated__))
+ ^
+order.cpp:75:28: warning: 'sort_index >' is deprecated [-Wdeprecated-declarations]
+ arma::uvec order = arma::sort_index(x, sortDirection) + 1;
+ ^
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CaseBasedReasoning/RcppArmadillo/include/armadillo_bits/fn_sort_index.hpp:40:1: note: 'sort_index >' has been explicitly marked deprecated here
+arma_deprecated
+^
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CaseBasedReasoning/RcppArmadillo/include/armadillo_bits/compiler_setup.hpp:291:44: note: expanded from macro 'arma_deprecated'
+ #define arma_deprecated __attribute__((__deprecated__))
+ ^
+2 warnings generated.
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CaseBasedReasoning/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CaseBasedReasoning/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CaseBasedReasoning/RcppParallel/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c parallelTerminalNodeID.cpp -o parallelTerminalNodeID.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o CaseBasedReasoning.so RcppExports.o distanceAPI.o distances.o kNN.o order.o parallelTerminalNodeID.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [CaseBasedReasoning.so] Error 1
+ERROR: compilation failed for package ‘CaseBasedReasoning’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/CaseBasedReasoning/new/CaseBasedReasoning.Rcheck/CaseBasedReasoning’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘CaseBasedReasoning’ ...
+** package ‘CaseBasedReasoning’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CaseBasedReasoning/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CaseBasedReasoning/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CaseBasedReasoning/RcppParallel/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CaseBasedReasoning/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CaseBasedReasoning/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CaseBasedReasoning/RcppParallel/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c distanceAPI.cpp -o distanceAPI.o
+In file included from distanceAPI.cpp:1:
+./distanceAPI.h:134:16: warning: 'rfDepthXYDistanceAPI::calc' hides overloaded virtual function [-Woverloaded-virtual]
+ virtual void calc(arma::mat& xNodeIDs, arma::mat& yNodeIDs);
+ ^
+./distanceAPI.h:121:16: note: hidden overloaded virtual function 'rfDepthDistanceAPI::calc' declared here: different number of parameters (1 vs 2)
+ virtual void calc(arma::mat& xNodeIDs);
+ ^
+In file included from distanceAPI.cpp:1:
+In file included from ./distanceAPI.h:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CaseBasedReasoning/RcppArmadillo/include/RcppArmadillo.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CaseBasedReasoning/RcppArmadillo/include/RcppArmadilloForward.h:26:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CaseBasedReasoning/Rcpp/include/RcppCommon.h:29:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CaseBasedReasoning/Rcpp/include/Rcpp/r/headers.h:59:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CaseBasedReasoning/Rcpp/include/Rcpp/platform/compiler.h:153:
+In file included from /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/include/c++/v1/unordered_map:384:
+In file included from /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/include/c++/v1/__hash_table:16:
+/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/include/c++/v1/memory:3706:5: warning: destructor called on non-final 'weightedDistance' that has virtual functions but non-virtual destructor [-Wdelete-non-virtual-dtor]
+ __data_.second().~_Tp();
+ ^
+/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/include/c++/v1/memory:3667:9: note: in instantiation of member function 'std::__1::__shared_ptr_emplace >::__on_zero_shared' requested here
+ __shared_ptr_emplace(_Alloc __a, _Args&& ...__args)
+ ^
+/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/include/c++/v1/memory:4327:26: note: in instantiation of function template specialization 'std::__1::__shared_ptr_emplace >::__shared_ptr_emplace' requested here
+ ::new(__hold2.get()) _CntrlBlk(__a2, _VSTD::forward<_Args>(__args)...);
+ ^
+/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/include/c++/v1/memory:4706:29: note: in instantiation of function template specialization 'std::__1::shared_ptr::make_shared' requested here
+ return shared_ptr<_Tp>::make_shared(_VSTD::forward<_Args>(__args)...);
+ ^
+distanceAPI.cpp:27:16: note: in instantiation of function template specialization 'std::__1::make_shared' requested here
+ dist_ = std::make_shared(dist);
+ ^
+/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/include/c++/v1/memory:3706:23: note: qualify call to silence this warning
+ __data_.second().~_Tp();
+ ^
+/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/include/c++/v1/memory:3706:5: warning: destructor called on non-final 'rangerProximity' that has virtual functions but non-virtual destructor [-Wdelete-non-virtual-dtor]
+ __data_.second().~_Tp();
+ ^
+/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/include/c++/v1/memory:3667:9: note: in instantiation of member function 'std::__1::__shared_ptr_emplace >::__on_zero_shared' requested here
+ __shared_ptr_emplace(_Alloc __a, _Args&& ...__args)
+ ^
+/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/include/c++/v1/memory:4327:26: note: in instantiation of function template specialization 'std::__1::__shared_ptr_emplace >::__shared_ptr_emplace' requested here
+ ::new(__hold2.get()) _CntrlBlk(__a2, _VSTD::forward<_Args>(__args)...);
+ ^
+/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/include/c++/v1/memory:4706:29: note: in instantiation of function template specialization 'std::__1::shared_ptr::make_shared' requested here
+ return shared_ptr<_Tp>::make_shared(_VSTD::forward<_Args>(__args)...);
+ ^
+distanceAPI.cpp:89:16: note: in instantiation of function template specialization 'std::__1::make_shared' requested here
+ dist_ = std::make_shared(dist);
+ ^
+/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/include/c++/v1/memory:3706:23: note: qualify call to silence this warning
+ __data_.second().~_Tp();
+ ^
+/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/include/c++/v1/memory:3706:5: warning: destructor called on non-final 'rfDepthDistance' that has virtual functions but non-virtual destructor [-Wdelete-non-virtual-dtor]
+ __data_.second().~_Tp();
+ ^
+/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/include/c++/v1/memory:3667:9: note: in instantiation of member function 'std::__1::__shared_ptr_emplace >::__on_zero_shared' requested here
+ __shared_ptr_emplace(_Alloc __a, _Args&& ...__args)
+ ^
+/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/include/c++/v1/memory:4327:26: note: in instantiation of function template specialization 'std::__1::__shared_ptr_emplace >::__shared_ptr_emplace' requested here
+ ::new(__hold2.get()) _CntrlBlk(__a2, _VSTD::forward<_Args>(__args)...);
+ ^
+/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/include/c++/v1/memory:4706:29: note: in instantiation of function template specialization 'std::__1::shared_ptr::make_shared' requested here
+ return shared_ptr<_Tp>::make_shared(_VSTD::forward<_Args>(__args)...);
+ ^
+distanceAPI.cpp:124:16: note: in instantiation of function template specialization 'std::__1::make_shared' requested here
+ dist_ = std::make_shared(dist);
+ ^
+/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/include/c++/v1/memory:3706:23: note: qualify call to silence this warning
+ __data_.second().~_Tp();
+ ^
+4 warnings generated.
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CaseBasedReasoning/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CaseBasedReasoning/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CaseBasedReasoning/RcppParallel/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c distances.cpp -o distances.o
+In file included from distances.cpp:4:
+./distanceAPI.h:134:16: warning: 'rfDepthXYDistanceAPI::calc' hides overloaded virtual function [-Woverloaded-virtual]
+ virtual void calc(arma::mat& xNodeIDs, arma::mat& yNodeIDs);
+ ^
+./distanceAPI.h:121:16: note: hidden overloaded virtual function 'rfDepthDistanceAPI::calc' declared here: different number of parameters (1 vs 2)
+ virtual void calc(arma::mat& xNodeIDs);
+ ^
+1 warning generated.
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CaseBasedReasoning/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CaseBasedReasoning/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CaseBasedReasoning/RcppParallel/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c kNN.cpp -o kNN.o
+kNN.cpp:25:19: warning: 'sort_index >' is deprecated [-Wdeprecated-declarations]
+ order = arma::sort_index(tmpDist, sortDirection);
+ ^
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CaseBasedReasoning/RcppArmadillo/include/armadillo_bits/fn_sort_index.hpp:40:1: note: 'sort_index >' has been explicitly marked deprecated here
+arma_deprecated
+^
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CaseBasedReasoning/RcppArmadillo/include/armadillo_bits/compiler_setup.hpp:291:44: note: expanded from macro 'arma_deprecated'
+ #define arma_deprecated __attribute__((__deprecated__))
+ ^
+1 warning generated.
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CaseBasedReasoning/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CaseBasedReasoning/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CaseBasedReasoning/RcppParallel/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c order.cpp -o order.o
+order.cpp:26:21: warning: 'sort_index >' is deprecated [-Wdeprecated-declarations]
+ order = arma::sort_index(x_.col(i), sortDirection_);
+ ^
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CaseBasedReasoning/RcppArmadillo/include/armadillo_bits/fn_sort_index.hpp:40:1: note: 'sort_index >' has been explicitly marked deprecated here
+arma_deprecated
+^
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CaseBasedReasoning/RcppArmadillo/include/armadillo_bits/compiler_setup.hpp:291:44: note: expanded from macro 'arma_deprecated'
+ #define arma_deprecated __attribute__((__deprecated__))
+ ^
+order.cpp:75:28: warning: 'sort_index >' is deprecated [-Wdeprecated-declarations]
+ arma::uvec order = arma::sort_index(x, sortDirection) + 1;
+ ^
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CaseBasedReasoning/RcppArmadillo/include/armadillo_bits/fn_sort_index.hpp:40:1: note: 'sort_index >' has been explicitly marked deprecated here
+arma_deprecated
+^
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CaseBasedReasoning/RcppArmadillo/include/armadillo_bits/compiler_setup.hpp:291:44: note: expanded from macro 'arma_deprecated'
+ #define arma_deprecated __attribute__((__deprecated__))
+ ^
+2 warnings generated.
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CaseBasedReasoning/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CaseBasedReasoning/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CaseBasedReasoning/RcppParallel/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c parallelTerminalNodeID.cpp -o parallelTerminalNodeID.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o CaseBasedReasoning.so RcppExports.o distanceAPI.o distances.o kNN.o order.o parallelTerminalNodeID.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [CaseBasedReasoning.so] Error 1
+ERROR: compilation failed for package ‘CaseBasedReasoning’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/CaseBasedReasoning/old/CaseBasedReasoning.Rcheck/CaseBasedReasoning’
+
+```
+# CB2
+
+
+
+* Version: 1.1
+* Source code: https://github.com/cran/CB2
+* Date/Publication: 2019-02-19 08:20:08 UTC
+* Number of recursive dependencies: 59
+
+Run `revdep_details(,"CB2")` for more info
+
+
+
+## In both
+
+* checking whether package ‘CB2’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/CB2/new/CB2.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘CB2’ ...
+** package ‘CB2’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CB2/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CB2/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c CB2.cpp -o CB2.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CB2/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CB2/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o CB2.so CB2.o RcppExports.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [CB2.so] Error 1
+ERROR: compilation failed for package ‘CB2’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/CB2/new/CB2.Rcheck/CB2’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘CB2’ ...
+** package ‘CB2’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CB2/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CB2/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c CB2.cpp -o CB2.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CB2/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CB2/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o CB2.so CB2.o RcppExports.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [CB2.so] Error 1
+ERROR: compilation failed for package ‘CB2’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/CB2/old/CB2.Rcheck/CB2’
+
+```
+# circumplex
+
+
+
+* Version: 0.3.0
+* Source code: https://github.com/cran/circumplex
+* URL: https://github.com/jmgirard/circumplex
+* BugReports: https://github.com/jmgirard/circumplex/issues
+* Date/Publication: 2019-04-26 09:30:06 UTC
+* Number of recursive dependencies: 91
+
+Run `revdep_details(,"circumplex")` for more info
+
+
+
+## In both
+
+* checking whether package ‘circumplex’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/circumplex/new/circumplex.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘circumplex’ ...
+** package ‘circumplex’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/circumplex/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/circumplex/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp -fPIC -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o
+clang: error: unsupported option '-fopenmp'
+make: *** [RcppExports.o] Error 1
+ERROR: compilation failed for package ‘circumplex’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/circumplex/new/circumplex.Rcheck/circumplex’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘circumplex’ ...
+** package ‘circumplex’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/circumplex/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/circumplex/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp -fPIC -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o
+clang: error: unsupported option '-fopenmp'
+make: *** [RcppExports.o] Error 1
+ERROR: compilation failed for package ‘circumplex’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/circumplex/old/circumplex.Rcheck/circumplex’
+
+```
+# classyfireR
+
+
+
+* Version: 0.2.0
+* Source code: https://github.com/cran/classyfireR
+* URL: https://github.com/wilsontom/classyfireR
+* BugReports: https://github.com/wilsontom/classyfireR/issues
+* Date/Publication: 2019-02-25 17:30:06 UTC
+* Number of recursive dependencies: 36
+
+Run `revdep_details(,"classyfireR")` for more info
+
+
+
+## In both
+
+* checking examples ... ERROR
+ ```
+ ...
+
+ The following object is masked from ‘package:magrittr’:
+
+ extract
+
+ >
+ > keys <- c(
+ + 'BRMWTNUJHUMWMS-LURJTMIESA-N',
+ + 'XFNJVJPLKCPIBV-UHFFFAOYSA-N',
+ + 'TYEYBOSBBBHJIV-UHFFFAOYSA-N',
+ + 'AFENDNXGAFYKQO-UHFFFAOYSA-N',
+ + 'WHEUWNKSCXYKBU-QPWUGHHJSA-N',
+ + 'WHBMMWSBFZVSSR-GSVOUGTGSA-N')
+ >
+ > classification_list <- map(keys, get_classification)
+ >
+ > classification_list <- map(classification_list, ~{select(.,-CHEMONT)})
+ Error in UseMethod("select_") :
+ no applicable method for 'select_' applied to an object of class "NULL"
+ Calls: map -> .f -> select -> select.default -> select_
+ Execution halted
+ ```
+
+* R CMD check timed out
+
+
+# CNPBayes
+
+
+
+* Version: 1.12.0
+* Source code: https://github.com/cran/CNPBayes
+* URL: https://github.com/scristia/CNPBayes
+* BugReports: https://github.com/scristia/CNPBayes/issues
+* Date/Publication: 2018-10-30
+* Number of recursive dependencies: 153
+
+Run `revdep_details(,"CNPBayes")` for more info
+
+
+
+## In both
+
+* checking whether package ‘CNPBayes’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/CNPBayes/new/CNPBayes.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘CNPBayes’ ...
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CNPBayes/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c RcppExports.cpp -o RcppExports.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CNPBayes/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c miscfunctions.cpp -o miscfunctions.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CNPBayes/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c multibatch.cpp -o multibatch.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CNPBayes/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c multibatch_pooledvar.cpp -o multibatch_pooledvar.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CNPBayes/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c multibatch_reduced.cpp -o multibatch_reduced.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CNPBayes/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c pooledvar_reduced.cpp -o pooledvar_reduced.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o CNPBayes.so RcppExports.o miscfunctions.o multibatch.o multibatch_pooledvar.o multibatch_reduced.o pooledvar_reduced.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [CNPBayes.so] Error 1
+ERROR: compilation failed for package ‘CNPBayes’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/CNPBayes/new/CNPBayes.Rcheck/CNPBayes’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘CNPBayes’ ...
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CNPBayes/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c RcppExports.cpp -o RcppExports.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CNPBayes/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c miscfunctions.cpp -o miscfunctions.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CNPBayes/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c multibatch.cpp -o multibatch.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CNPBayes/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c multibatch_pooledvar.cpp -o multibatch_pooledvar.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CNPBayes/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c multibatch_reduced.cpp -o multibatch_reduced.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/CNPBayes/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c pooledvar_reduced.cpp -o pooledvar_reduced.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o CNPBayes.so RcppExports.o miscfunctions.o multibatch.o multibatch_pooledvar.o multibatch_reduced.o pooledvar_reduced.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [CNPBayes.so] Error 1
+ERROR: compilation failed for package ‘CNPBayes’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/CNPBayes/old/CNPBayes.Rcheck/CNPBayes’
+
+```
+# CollapsABEL
+
+
+
+* Version: 0.10.11
+* Source code: https://github.com/cran/CollapsABEL
+* URL: https://bitbucket.org/kindlychung/collapsabel2/overview
+* BugReports: https://bitbucket.org/kindlychung/collapsabel2/issues
+* Date/Publication: 2016-12-11 20:35:07
+* Number of recursive dependencies: 97
+
+Run `revdep_details(,"CollapsABEL")` for more info
+
+
+
+## In both
+
+* checking whether package ‘CollapsABEL’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/CollapsABEL/new/CollapsABEL.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘CollapsABEL’ ...
+** package ‘CollapsABEL’ successfully unpacked and MD5 sums checked
+** using staged installation
+** R
+** byte-compile and prepare package for lazy loading
+WARNING: Initial Java 12 release has broken JNI support and does NOT work. Use stable Java 11 (or watch for 12u if avaiable).
+ERROR: Java exception occurred during rJava bootstrap - see stderr for Java stack trace.
+Exception in thread "main" java.lang.NullPointerException
+ at java.base/jdk.internal.reflect.Reflection.verifyMemberAccess(Reflection.java:130)
+ at java.base/java.lang.reflect.AccessibleObject.slowVerifyAccess(AccessibleObject.java:673)
+ at java.base/java.lang.reflect.AccessibleObject.verifyAccess(AccessibleObject.java:666)
+ at java.base/java.lang.reflect.AccessibleObject.checkAccess(AccessibleObject.java:638)
+ at java.base/java.lang.reflect.Field.checkAccess(Field.java:1075)
+ at java.base/java.lang.reflect.Field.get(Field.java:416)
+Error: .onLoad failed in loadNamespace() for 'collUtils', details:
+ call: .jcheck(silent = FALSE)
+ error: java.lang.NullPointerException.jcall(f, "Ljava/lang/Object;", "get", .jcast(ic, "java/lang/Object"))new("jobjRef", jobj = , jclass = "java/lang/NullPointerException")
+Execution halted
+ERROR: lazy loading failed for package ‘CollapsABEL’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/CollapsABEL/new/CollapsABEL.Rcheck/CollapsABEL’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘CollapsABEL’ ...
+** package ‘CollapsABEL’ successfully unpacked and MD5 sums checked
+** using staged installation
+** R
+** byte-compile and prepare package for lazy loading
+WARNING: Initial Java 12 release has broken JNI support and does NOT work. Use stable Java 11 (or watch for 12u if avaiable).
+ERROR: Java exception occurred during rJava bootstrap - see stderr for Java stack trace.
+Exception in thread "main" java.lang.NullPointerException
+ at java.base/jdk.internal.reflect.Reflection.verifyMemberAccess(Reflection.java:130)
+ at java.base/java.lang.reflect.AccessibleObject.slowVerifyAccess(AccessibleObject.java:673)
+ at java.base/java.lang.reflect.AccessibleObject.verifyAccess(AccessibleObject.java:666)
+ at java.base/java.lang.reflect.AccessibleObject.checkAccess(AccessibleObject.java:638)
+ at java.base/java.lang.reflect.Field.checkAccess(Field.java:1075)
+ at java.base/java.lang.reflect.Field.get(Field.java:416)
+Error: .onLoad failed in loadNamespace() for 'collUtils', details:
+ call: .jcheck(silent = FALSE)
+ error: java.lang.NullPointerException.jcall(f, "Ljava/lang/Object;", "get", .jcast(ic, "java/lang/Object"))new("jobjRef", jobj = , jclass = "java/lang/NullPointerException")
+Execution halted
+ERROR: lazy loading failed for package ‘CollapsABEL’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/CollapsABEL/old/CollapsABEL.Rcheck/CollapsABEL’
+
+```
+# colorednoise
+
+
+
+* Version: 1.0.4
+* Source code: https://github.com/cran/colorednoise
+* BugReports: http://github.com/japilo/colorednoise/issues
+* Date/Publication: 2019-01-23 12:50:14 UTC
+* Number of recursive dependencies: 85
+
+Run `revdep_details(,"colorednoise")` for more info
+
+
+
+## In both
+
+* checking whether package ‘colorednoise’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/colorednoise/new/colorednoise.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘colorednoise’ ...
+** package ‘colorednoise’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/colorednoise/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/colorednoise/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp -fPIC -Wno-c++11-inline-namespace -c RcppExports.cpp -o RcppExports.o
+clang: error: unsupported option '-fopenmp'
+make: *** [RcppExports.o] Error 1
+ERROR: compilation failed for package ‘colorednoise’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/colorednoise/new/colorednoise.Rcheck/colorednoise’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘colorednoise’ ...
+** package ‘colorednoise’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/colorednoise/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/colorednoise/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp -fPIC -Wno-c++11-inline-namespace -c RcppExports.cpp -o RcppExports.o
+clang: error: unsupported option '-fopenmp'
+make: *** [RcppExports.o] Error 1
+ERROR: compilation failed for package ‘colorednoise’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/colorednoise/old/colorednoise.Rcheck/colorednoise’
+
+```
+# COMPASS
+
+
+
+* Version: 1.20.1
+* Source code: https://github.com/cran/COMPASS
+* BugReports: https://github.com/RGLab/COMPASS/issues
+* Date/Publication: 2019-01-04
+* Number of recursive dependencies: 119
+
+Run `revdep_details(,"COMPASS")` for more info
+
+
+
+## In both
+
+* checking whether package ‘COMPASS’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/COMPASS/new/COMPASS.Rcheck/00install.out’ for details.
+ ```
+
+* checking for hidden files and directories ... NOTE
+ ```
+ Found the following hidden files and directories:
+ .github
+ These were most likely included in error. See section ‘Package
+ structure’ in the ‘Writing R Extensions’ manual.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘COMPASS’ ...
+** using staged installation
+** libs
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/COMPASS/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c COMPASS_init.c -o COMPASS_init.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/COMPASS/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c CellCounts.cpp -o CellCounts.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/COMPASS/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c CellCounts_character.cpp -o CellCounts_character.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/COMPASS/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c RcppExports.cpp -o RcppExports.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/COMPASS/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c digamma.c -o digamma.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/COMPASS/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c mat2vec.c -o mat2vec.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/COMPASS/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c melt_dataframe.c -o melt_dataframe.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/COMPASS/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c melt_matrix.c -o melt_matrix.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/COMPASS/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c samplePuPs.cpp -o samplePuPs.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/COMPASS/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c transpose_list.c -o transpose_list.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/COMPASS/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c updatealphas_Exp.cpp -o updatealphas_Exp.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/COMPASS/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c updatealphau.cpp -o updatealphau.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/COMPASS/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c updatealphau_noPu_Exp.cpp -o updatealphau_noPu_Exp.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/COMPASS/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c updatebeta_RW.cpp -o updatebeta_RW.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/COMPASS/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c updategammak_noPu.cpp -o updategammak_noPu.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/COMPASS/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c utils.c -o utils.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o COMPASS.so COMPASS_init.o CellCounts.o CellCounts_character.o RcppExports.o digamma.o mat2vec.o melt_dataframe.o melt_matrix.o samplePuPs.o transpose_list.o updatealphas_Exp.o updatealphau.o updatealphau_noPu_Exp.o updatebeta_RW.o updategammak_noPu.o utils.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [COMPASS.so] Error 1
+ERROR: compilation failed for package ‘COMPASS’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/COMPASS/new/COMPASS.Rcheck/COMPASS’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘COMPASS’ ...
+** using staged installation
+** libs
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/COMPASS/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c COMPASS_init.c -o COMPASS_init.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/COMPASS/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c CellCounts.cpp -o CellCounts.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/COMPASS/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c CellCounts_character.cpp -o CellCounts_character.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/COMPASS/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c RcppExports.cpp -o RcppExports.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/COMPASS/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c digamma.c -o digamma.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/COMPASS/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c mat2vec.c -o mat2vec.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/COMPASS/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c melt_dataframe.c -o melt_dataframe.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/COMPASS/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c melt_matrix.c -o melt_matrix.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/COMPASS/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c samplePuPs.cpp -o samplePuPs.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/COMPASS/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c transpose_list.c -o transpose_list.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/COMPASS/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c updatealphas_Exp.cpp -o updatealphas_Exp.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/COMPASS/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c updatealphau.cpp -o updatealphau.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/COMPASS/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c updatealphau_noPu_Exp.cpp -o updatealphau_noPu_Exp.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/COMPASS/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c updatebeta_RW.cpp -o updatebeta_RW.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/COMPASS/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c updategammak_noPu.cpp -o updategammak_noPu.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/COMPASS/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c utils.c -o utils.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o COMPASS.so COMPASS_init.o CellCounts.o CellCounts_character.o RcppExports.o digamma.o mat2vec.o melt_dataframe.o melt_matrix.o samplePuPs.o transpose_list.o updatealphas_Exp.o updatealphau.o updatealphau_noPu_Exp.o updatebeta_RW.o updategammak_noPu.o utils.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [COMPASS.so] Error 1
+ERROR: compilation failed for package ‘COMPASS’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/COMPASS/old/COMPASS.Rcheck/COMPASS’
+
+```
+# Countr
+
+
+
+* Version: 3.5.2
+* Source code: https://github.com/cran/Countr
+* Date/Publication: 2018-10-04 11:00:17 UTC
+* Number of recursive dependencies: 90
+
+Run `revdep_details(,"Countr")` for more info
+
+
+
+## In both
+
+* checking whether package ‘Countr’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/Countr/new/Countr.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘Countr’ ...
+** package ‘Countr’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/Countr/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/Countr/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c RcppExports.cpp -o RcppExports.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/Countr/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/Countr/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c built_in_distributions.cpp -o built_in_distributions.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/Countr/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/Countr/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c conv_all.cpp -o conv_all.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/Countr/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/Countr/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c conv_dePril.cpp -o conv_dePril.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/Countr/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/Countr/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c conv_naive.cpp -o conv_naive.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/Countr/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/Countr/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c modifiedRenewal.cpp -o modifiedRenewal.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/Countr/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/Countr/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c series_hetwei.cpp -o series_hetwei.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/Countr/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/Countr/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c series_weibull.cpp -o series_weibull.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/Countr/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/Countr/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c utils.cpp -o utils.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o Countr.so RcppExports.o built_in_distributions.o conv_all.o conv_dePril.o conv_naive.o modifiedRenewal.o series_hetwei.o series_weibull.o utils.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [Countr.so] Error 1
+ERROR: compilation failed for package ‘Countr’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/Countr/new/Countr.Rcheck/Countr’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘Countr’ ...
+** package ‘Countr’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/Countr/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/Countr/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c RcppExports.cpp -o RcppExports.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/Countr/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/Countr/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c built_in_distributions.cpp -o built_in_distributions.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/Countr/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/Countr/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c conv_all.cpp -o conv_all.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/Countr/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/Countr/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c conv_dePril.cpp -o conv_dePril.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/Countr/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/Countr/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c conv_naive.cpp -o conv_naive.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/Countr/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/Countr/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c modifiedRenewal.cpp -o modifiedRenewal.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/Countr/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/Countr/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c series_hetwei.cpp -o series_hetwei.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/Countr/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/Countr/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c series_weibull.cpp -o series_weibull.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/Countr/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/Countr/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c utils.cpp -o utils.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o Countr.so RcppExports.o built_in_distributions.o conv_all.o conv_dePril.o conv_naive.o modifiedRenewal.o series_hetwei.o series_weibull.o utils.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [Countr.so] Error 1
+ERROR: compilation failed for package ‘Countr’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/Countr/old/Countr.Rcheck/Countr’
+
+```
+# cpr
+
+
+
+* Version: 0.2.3
+* Source code: https://github.com/cran/cpr
+* URL: https://github.com/dewittpe/cpr/
+* Date/Publication: 2017-03-07 13:41:34
+* Number of recursive dependencies: 85
+
+Run `revdep_details(,"cpr")` for more info
+
+
+
+## In both
+
+* checking whether package ‘cpr’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/cpr/new/cpr.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘cpr’ ...
+** package ‘cpr’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/cpr/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/cpr/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -I../inst/include -DARMA_64BIT_WORD -fPIC -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/cpr/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/cpr/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -I../inst/include -DARMA_64BIT_WORD -fPIC -Wall -g -O2 -c boehm.cpp -o boehm.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/cpr/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/cpr/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -I../inst/include -DARMA_64BIT_WORD -fPIC -Wall -g -O2 -c bsplines.cpp -o bsplines.o
+bsplines.cpp:24:10: warning: unused variable 'a' [-Wunused-variable]
+ double a = 0.0;
+ ^
+bsplines.cpp:25:10: warning: unused variable 'b' [-Wunused-variable]
+ double b = 0.0;
+ ^
+2 warnings generated.
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/cpr/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/cpr/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -I../inst/include -DARMA_64BIT_WORD -fPIC -Wall -g -O2 -c cpr.cpp -o cpr.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/cpr/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/cpr/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -I../inst/include -DARMA_64BIT_WORD -fPIC -Wall -g -O2 -c diag_only.cpp -o diag_only.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/cpr/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/cpr/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -I../inst/include -DARMA_64BIT_WORD -fPIC -Wall -g -O2 -c matrix_rank.cpp -o matrix_rank.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/cpr/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/cpr/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c registerDynamicSymbol.c -o registerDynamicSymbol.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/cpr/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/cpr/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -I../inst/include -DARMA_64BIT_WORD -fPIC -Wall -g -O2 -c tensors.cpp -o tensors.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o cpr.so RcppExports.o boehm.o bsplines.o cpr.o diag_only.o matrix_rank.o registerDynamicSymbol.o tensors.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [cpr.so] Error 1
+ERROR: compilation failed for package ‘cpr’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/cpr/new/cpr.Rcheck/cpr’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘cpr’ ...
+** package ‘cpr’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/cpr/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/cpr/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -I../inst/include -DARMA_64BIT_WORD -fPIC -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/cpr/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/cpr/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -I../inst/include -DARMA_64BIT_WORD -fPIC -Wall -g -O2 -c boehm.cpp -o boehm.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/cpr/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/cpr/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -I../inst/include -DARMA_64BIT_WORD -fPIC -Wall -g -O2 -c bsplines.cpp -o bsplines.o
+bsplines.cpp:24:10: warning: unused variable 'a' [-Wunused-variable]
+ double a = 0.0;
+ ^
+bsplines.cpp:25:10: warning: unused variable 'b' [-Wunused-variable]
+ double b = 0.0;
+ ^
+2 warnings generated.
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/cpr/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/cpr/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -I../inst/include -DARMA_64BIT_WORD -fPIC -Wall -g -O2 -c cpr.cpp -o cpr.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/cpr/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/cpr/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -I../inst/include -DARMA_64BIT_WORD -fPIC -Wall -g -O2 -c diag_only.cpp -o diag_only.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/cpr/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/cpr/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -I../inst/include -DARMA_64BIT_WORD -fPIC -Wall -g -O2 -c matrix_rank.cpp -o matrix_rank.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/cpr/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/cpr/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c registerDynamicSymbol.c -o registerDynamicSymbol.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/cpr/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/cpr/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -I../inst/include -DARMA_64BIT_WORD -fPIC -Wall -g -O2 -c tensors.cpp -o tensors.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o cpr.so RcppExports.o boehm.o bsplines.o cpr.o diag_only.o matrix_rank.o registerDynamicSymbol.o tensors.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [cpr.so] Error 1
+ERROR: compilation failed for package ‘cpr’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/cpr/old/cpr.Rcheck/cpr’
+
+```
+# crawl
+
+
+
+* Version: 2.2.1
+* Source code: https://github.com/cran/crawl
+* Date/Publication: 2018-09-14 19:20:10 UTC
+* Number of recursive dependencies: 96
+
+Run `revdep_details(,"crawl")` for more info
+
+
+
+## In both
+
+* checking whether package ‘crawl’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/crawl/new/crawl.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘crawl’ ...
+** package ‘crawl’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/crawl/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/crawl/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c CTCRWN2LL.cpp -o CTCRWN2LL.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/crawl/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/crawl/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c CTCRWN2LL_DRIFT.cpp -o CTCRWN2LL_DRIFT.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/crawl/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/crawl/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c CTCRWPREDICT.cpp -o CTCRWPREDICT.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/crawl/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/crawl/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c CTCRWPREDICT_DRIFT.cpp -o CTCRWPREDICT_DRIFT.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/crawl/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/crawl/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c CTCRWSAMPLE.cpp -o CTCRWSAMPLE.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/crawl/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/crawl/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c CTCRWSAMPLE_DRIFT.cpp -o CTCRWSAMPLE_DRIFT.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/crawl/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/crawl/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c RcppExports.cpp -o RcppExports.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/crawl/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/crawl/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c SMM_MATS.cpp -o SMM_MATS.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/crawl/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/crawl/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c init.c -o init.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o crawl.so CTCRWN2LL.o CTCRWN2LL_DRIFT.o CTCRWPREDICT.o CTCRWPREDICT_DRIFT.o CTCRWSAMPLE.o CTCRWSAMPLE_DRIFT.o RcppExports.o SMM_MATS.o init.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [crawl.so] Error 1
+ERROR: compilation failed for package ‘crawl’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/crawl/new/crawl.Rcheck/crawl’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘crawl’ ...
+** package ‘crawl’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/crawl/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/crawl/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c CTCRWN2LL.cpp -o CTCRWN2LL.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/crawl/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/crawl/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c CTCRWN2LL_DRIFT.cpp -o CTCRWN2LL_DRIFT.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/crawl/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/crawl/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c CTCRWPREDICT.cpp -o CTCRWPREDICT.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/crawl/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/crawl/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c CTCRWPREDICT_DRIFT.cpp -o CTCRWPREDICT_DRIFT.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/crawl/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/crawl/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c CTCRWSAMPLE.cpp -o CTCRWSAMPLE.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/crawl/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/crawl/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c CTCRWSAMPLE_DRIFT.cpp -o CTCRWSAMPLE_DRIFT.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/crawl/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/crawl/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c RcppExports.cpp -o RcppExports.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/crawl/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/crawl/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c SMM_MATS.cpp -o SMM_MATS.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/crawl/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/crawl/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c init.c -o init.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o crawl.so CTCRWN2LL.o CTCRWN2LL_DRIFT.o CTCRWPREDICT.o CTCRWPREDICT_DRIFT.o CTCRWSAMPLE.o CTCRWSAMPLE_DRIFT.o RcppExports.o SMM_MATS.o init.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [crawl.so] Error 1
+ERROR: compilation failed for package ‘crawl’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/crawl/old/crawl.Rcheck/crawl’
+
+```
+# DataVisualizations
+
+
+
+* Version: 1.1.6
+* Source code: https://github.com/cran/DataVisualizations
+* URL: http://www.deepbionics.org
+* BugReports: https://github.com/Mthrun/DataVisualizations/issues
+* Date/Publication: 2019-03-08 12:42:42 UTC
+* Number of recursive dependencies: 144
+
+Run `revdep_details(,"DataVisualizations")` for more info
+
+
+
+## In both
+
+* checking whether package ‘DataVisualizations’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/DataVisualizations/new/DataVisualizations.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘DataVisualizations’ ...
+** package ‘DataVisualizations’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DataVisualizations/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DataVisualizations/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DataVisualizations/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DataVisualizations/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c c_inPSphere2D.cpp -o c_inPSphere2D.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o DataVisualizations.so RcppExports.o c_inPSphere2D.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [DataVisualizations.so] Error 1
+ERROR: compilation failed for package ‘DataVisualizations’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/DataVisualizations/new/DataVisualizations.Rcheck/DataVisualizations’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘DataVisualizations’ ...
+** package ‘DataVisualizations’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DataVisualizations/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DataVisualizations/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DataVisualizations/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DataVisualizations/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c c_inPSphere2D.cpp -o c_inPSphere2D.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o DataVisualizations.so RcppExports.o c_inPSphere2D.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [DataVisualizations.so] Error 1
+ERROR: compilation failed for package ‘DataVisualizations’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/DataVisualizations/old/DataVisualizations.Rcheck/DataVisualizations’
+
+```
+# DepthProc
+
+
+
+* Version: 2.1.1
+* Source code: https://github.com/cran/DepthProc
+* URL: https://www.depthproc.zstat.pl/, https://github.com/zzawadz/DepthProc
+* BugReports: https://github.com/zzawadz/DepthProc/issues
+* Date/Publication: 2019-04-22 12:00:03 UTC
+* Number of recursive dependencies: 103
+
+Run `revdep_details(,"DepthProc")` for more info
+
+
+
+## In both
+
+* checking whether package ‘DepthProc’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/DepthProc/new/DepthProc.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘DepthProc’ ...
+** package ‘DepthProc’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DepthProc/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DepthProc/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp -fPIC -Wall -g -O2 -c Depth.cpp -o Depth.o
+clang: error: unsupported option '-fopenmp'
+make: *** [Depth.o] Error 1
+ERROR: compilation failed for package ‘DepthProc’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/DepthProc/new/DepthProc.Rcheck/DepthProc’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘DepthProc’ ...
+** package ‘DepthProc’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DepthProc/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DepthProc/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp -fPIC -Wall -g -O2 -c Depth.cpp -o Depth.o
+clang: error: unsupported option '-fopenmp'
+make: *** [Depth.o] Error 1
+ERROR: compilation failed for package ‘DepthProc’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/DepthProc/old/DepthProc.Rcheck/DepthProc’
+
+```
+# dialr
+
+
+
+* Version: 0.2.1
+* Source code: https://github.com/cran/dialr
+* URL: https://socialresearchcentre.github.io/dialr, https://github.com/socialresearchcentre/dialr, https://github.com/socialresearchcentre/dialrjars, https://github.com/googlei18n/libphonenumber
+* BugReports: https://github.com/socialresearchcentre/dialr/issues
+* Date/Publication: 2019-05-03 13:10:12 UTC
+* Number of recursive dependencies: 46
+
+Run `revdep_details(,"dialr")` for more info
+
+
+
+## In both
+
+* checking whether package ‘dialr’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/dialr/new/dialr.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘dialr’ ...
+** package ‘dialr’ successfully unpacked and MD5 sums checked
+** using staged installation
+** R
+** inst
+** byte-compile and prepare package for lazy loading
+** help
+*** installing help indices
+** building package indices
+** installing vignettes
+** testing if installed package can be loaded from temporary location
+WARNING: Initial Java 12 release has broken JNI support and does NOT work. Use stable Java 11 (or watch for 12u if avaiable).
+ERROR: Java exception occurred during rJava bootstrap - see stderr for Java stack trace.
+Exception in thread "main" java.lang.NullPointerException
+ at java.base/jdk.internal.reflect.Reflection.verifyMemberAccess(Reflection.java:130)
+ at java.base/java.lang.reflect.AccessibleObject.slowVerifyAccess(AccessibleObject.java:673)
+ at java.base/java.lang.reflect.AccessibleObject.verifyAccess(AccessibleObject.java:666)
+ at java.base/java.lang.reflect.AccessibleObject.checkAccess(AccessibleObject.java:638)
+ at java.base/java.lang.reflect.Field.checkAccess(Field.java:1075)
+ at java.base/java.lang.reflect.Field.get(Field.java:416)
+Error: package or namespace load failed for ‘dialr’:
+ .onAttach failed in attachNamespace() for 'dialr', details:
+ call: .jcheck(silent = FALSE)
+ error: java.lang.NullPointerException.jcall(f, "Ljava/lang/Object;", "get", .jcast(ic, "java/lang/Object"))new("jobjRef", jobj = , jclass = "java/lang/NullPointerException")
+Error: loading failed
+Execution halted
+ERROR: loading failed
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/dialr/new/dialr.Rcheck/dialr’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘dialr’ ...
+** package ‘dialr’ successfully unpacked and MD5 sums checked
+** using staged installation
+** R
+** inst
+** byte-compile and prepare package for lazy loading
+** help
+*** installing help indices
+** building package indices
+** installing vignettes
+** testing if installed package can be loaded from temporary location
+WARNING: Initial Java 12 release has broken JNI support and does NOT work. Use stable Java 11 (or watch for 12u if avaiable).
+ERROR: Java exception occurred during rJava bootstrap - see stderr for Java stack trace.
+Exception in thread "main" java.lang.NullPointerException
+ at java.base/jdk.internal.reflect.Reflection.verifyMemberAccess(Reflection.java:130)
+ at java.base/java.lang.reflect.AccessibleObject.slowVerifyAccess(AccessibleObject.java:673)
+ at java.base/java.lang.reflect.AccessibleObject.verifyAccess(AccessibleObject.java:666)
+ at java.base/java.lang.reflect.AccessibleObject.checkAccess(AccessibleObject.java:638)
+ at java.base/java.lang.reflect.Field.checkAccess(Field.java:1075)
+ at java.base/java.lang.reflect.Field.get(Field.java:416)
+Error: package or namespace load failed for ‘dialr’:
+ .onAttach failed in attachNamespace() for 'dialr', details:
+ call: .jcheck(silent = FALSE)
+ error: java.lang.NullPointerException.jcall(f, "Ljava/lang/Object;", "get", .jcast(ic, "java/lang/Object"))new("jobjRef", jobj = , jclass = "java/lang/NullPointerException")
+Error: loading failed
+Execution halted
+ERROR: loading failed
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/dialr/old/dialr.Rcheck/dialr’
+
+```
+# DiffBind
+
+
+
+* Version: 2.10.0
+* Source code: https://github.com/cran/DiffBind
+* Date/Publication: 2018-10-30
+* Number of recursive dependencies: 150
+
+Run `revdep_details(,"DiffBind")` for more info
+
+
+
+## In both
+
+* checking whether package ‘DiffBind’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/DiffBind/new/DiffBind.Rcheck/00install.out’ for details.
+ ```
+
+* checking package dependencies ... NOTE
+ ```
+ Packages which this enhances but not available for checking:
+ 'rgl', 'XLConnect'
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘DiffBind’ ...
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rsamtools/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c RcppExports.cpp -o RcppExports.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rsamtools/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c bamReader.cpp -o bamReader.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rsamtools/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c bedReader.cpp -o bedReader.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rsamtools/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c bitBucket.cpp -o bitBucket.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rsamtools/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c croi_func.cpp -o croi_func.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rsamtools/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c croi_main.cpp -o croi_main.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rsamtools/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c densitySet.cpp -o densitySet.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rsamtools/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c iBucket.cpp -o iBucket.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rsamtools/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c interval.cpp -o interval.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rsamtools/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c intervalDensity.cpp -o intervalDensity.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rsamtools/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c intervalNode.cpp -o intervalNode.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rsamtools/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c intervalSet.cpp -o intervalSet.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rsamtools/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c intervalTree.cpp -o intervalTree.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rsamtools/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c merge.cpp -o merge.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rsamtools/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c mergeOne.c -o mergeOne.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rsamtools/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c nodeGroup.cpp -o nodeGroup.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rsamtools/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c peakOrder.cpp -o peakOrder.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rsamtools/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c reader.cpp -o reader.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rsamtools/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c sequence.cpp -o sequence.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rsamtools/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c util.cpp -o util.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o DiffBind.so RcppExports.o bamReader.o bedReader.o bitBucket.o croi_func.o croi_main.o densitySet.o iBucket.o interval.o intervalDensity.o intervalNode.o intervalSet.o intervalTree.o merge.o mergeOne.o nodeGroup.o peakOrder.o reader.o sequence.o util.o /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rsamtools/usrlib//libbam.a /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rsamtools/usrlib//libbcf.a /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rsamtools/usrlib//libtabix.a -lz -pthread -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+installing to /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/DiffBind/new/DiffBind.Rcheck/00LOCK-DiffBind/00new/DiffBind/libs
+** R
+** data
+** inst
+** byte-compile and prepare package for lazy loading
+Error in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) :
+ there is no package called ‘GO.db’
+Calls: ... loadNamespace -> withRestarts -> withOneRestart -> doWithOneRestart
+Execution halted
+ERROR: lazy loading failed for package ‘DiffBind’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/DiffBind/new/DiffBind.Rcheck/DiffBind’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘DiffBind’ ...
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rsamtools/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c RcppExports.cpp -o RcppExports.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rsamtools/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c bamReader.cpp -o bamReader.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rsamtools/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c bedReader.cpp -o bedReader.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rsamtools/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c bitBucket.cpp -o bitBucket.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rsamtools/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c croi_func.cpp -o croi_func.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rsamtools/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c croi_main.cpp -o croi_main.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rsamtools/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c densitySet.cpp -o densitySet.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rsamtools/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c iBucket.cpp -o iBucket.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rsamtools/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c interval.cpp -o interval.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rsamtools/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c intervalDensity.cpp -o intervalDensity.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rsamtools/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c intervalNode.cpp -o intervalNode.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rsamtools/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c intervalSet.cpp -o intervalSet.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rsamtools/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c intervalTree.cpp -o intervalTree.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rsamtools/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c merge.cpp -o merge.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rsamtools/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c mergeOne.c -o mergeOne.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rsamtools/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c nodeGroup.cpp -o nodeGroup.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rsamtools/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c peakOrder.cpp -o peakOrder.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rsamtools/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c reader.cpp -o reader.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rsamtools/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c sequence.cpp -o sequence.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -D_USE_KNETFILE -DBGZF_CACHE -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rsamtools/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c util.cpp -o util.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o DiffBind.so RcppExports.o bamReader.o bedReader.o bitBucket.o croi_func.o croi_main.o densitySet.o iBucket.o interval.o intervalDensity.o intervalNode.o intervalSet.o intervalTree.o merge.o mergeOne.o nodeGroup.o peakOrder.o reader.o sequence.o util.o /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rsamtools/usrlib//libbam.a /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rsamtools/usrlib//libbcf.a /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/DiffBind/Rsamtools/usrlib//libtabix.a -lz -pthread -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+installing to /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/DiffBind/old/DiffBind.Rcheck/00LOCK-DiffBind/00new/DiffBind/libs
+** R
+** data
+** inst
+** byte-compile and prepare package for lazy loading
+Error in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) :
+ there is no package called ‘GO.db’
+Calls: ... loadNamespace -> withRestarts -> withOneRestart -> doWithOneRestart
+Execution halted
+ERROR: lazy loading failed for package ‘DiffBind’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/DiffBind/old/DiffBind.Rcheck/DiffBind’
+
+```
+# DiversityOccupancy
+
+
+
+* Version: 1.0.6
+* Source code: https://github.com/cran/DiversityOccupancy
+* Date/Publication: 2017-03-02 18:32:36
+* Number of recursive dependencies: 81
+
+Run `revdep_details(,"DiversityOccupancy")` for more info
+
+
+
+## In both
+
+* checking whether package ‘DiversityOccupancy’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/DiversityOccupancy/new/DiversityOccupancy.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘DiversityOccupancy’ ...
+** package ‘DiversityOccupancy’ successfully unpacked and MD5 sums checked
+** using staged installation
+** R
+** data
+*** moving datasets to lazyload DB
+** inst
+** byte-compile and prepare package for lazy loading
+WARNING: Initial Java 12 release has broken JNI support and does NOT work. Use stable Java 11 (or watch for 12u if avaiable).
+ERROR: Java exception occurred during rJava bootstrap - see stderr for Java stack trace.
+Exception in thread "main" java.lang.NullPointerException
+ at java.base/jdk.internal.reflect.Reflection.verifyMemberAccess(Reflection.java:130)
+ at java.base/java.lang.reflect.AccessibleObject.slowVerifyAccess(AccessibleObject.java:673)
+ at java.base/java.lang.reflect.AccessibleObject.verifyAccess(AccessibleObject.java:666)
+ at java.base/java.lang.reflect.AccessibleObject.checkAccess(AccessibleObject.java:638)
+ at java.base/java.lang.reflect.Field.checkAccess(Field.java:1075)
+ at java.base/java.lang.reflect.Field.get(Field.java:416)
+Error: .onLoad failed in loadNamespace() for 'glmulti', details:
+ call: .jcheck(silent = FALSE)
+ error: java.lang.NullPointerException.jcall(f, "Ljava/lang/Object;", "get", .jcast(ic, "java/lang/Object"))new("jobjRef", jobj = , jclass = "java/lang/NullPointerException")
+Execution halted
+ERROR: lazy loading failed for package ‘DiversityOccupancy’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/DiversityOccupancy/new/DiversityOccupancy.Rcheck/DiversityOccupancy’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘DiversityOccupancy’ ...
+** package ‘DiversityOccupancy’ successfully unpacked and MD5 sums checked
+** using staged installation
+** R
+** data
+*** moving datasets to lazyload DB
+** inst
+** byte-compile and prepare package for lazy loading
+WARNING: Initial Java 12 release has broken JNI support and does NOT work. Use stable Java 11 (or watch for 12u if avaiable).
+ERROR: Java exception occurred during rJava bootstrap - see stderr for Java stack trace.
+Exception in thread "main" java.lang.NullPointerException
+ at java.base/jdk.internal.reflect.Reflection.verifyMemberAccess(Reflection.java:130)
+ at java.base/java.lang.reflect.AccessibleObject.slowVerifyAccess(AccessibleObject.java:673)
+ at java.base/java.lang.reflect.AccessibleObject.verifyAccess(AccessibleObject.java:666)
+ at java.base/java.lang.reflect.AccessibleObject.checkAccess(AccessibleObject.java:638)
+ at java.base/java.lang.reflect.Field.checkAccess(Field.java:1075)
+ at java.base/java.lang.reflect.Field.get(Field.java:416)
+Error: .onLoad failed in loadNamespace() for 'glmulti', details:
+ call: .jcheck(silent = FALSE)
+ error: java.lang.NullPointerException.jcall(f, "Ljava/lang/Object;", "get", .jcast(ic, "java/lang/Object"))new("jobjRef", jobj = , jclass = "java/lang/NullPointerException")
+Execution halted
+ERROR: lazy loading failed for package ‘DiversityOccupancy’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/DiversityOccupancy/old/DiversityOccupancy.Rcheck/DiversityOccupancy’
+
+```
+# dtwclust
+
+
+
+* Version: 5.5.2
+* Source code: https://github.com/cran/dtwclust
+* URL: https://github.com/asardaes/dtwclust
+* BugReports: https://github.com/asardaes/dtwclust/issues
+* Date/Publication: 2019-03-09 15:12:40 UTC
+* Number of recursive dependencies: 75
+
+Run `revdep_details(,"dtwclust")` for more info
+
+
+
+## In both
+
+* checking whether package ‘dtwclust’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/dtwclust/new/dtwclust.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘dtwclust’ ...
+** package ‘dtwclust’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppParallel/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c utils/utils.cpp -o utils/utils.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppParallel/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c utils/R-utils.cpp -o utils/R-utils.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppParallel/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c utils/KahanSummer.cpp -o utils/KahanSummer.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppParallel/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c utils/UndirectedGraph.cpp -o utils/UndirectedGraph.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppParallel/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c utils/envelope.cpp -o utils/envelope.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppParallel/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c centroids/dba.cpp -o centroids/dba.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppParallel/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c centroids/sdtw-cent.cpp -o centroids/sdtw-cent.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppParallel/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c distmat/distmat-loop.cpp -o distmat/distmat-loop.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppParallel/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c distmat/distmat.cpp -o distmat/distmat.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppParallel/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c distmat/fillers.cpp -o distmat/fillers.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppParallel/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c distmat/dtw-lb.cpp -o distmat/dtw-lb.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppParallel/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c init.cpp -o init.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppParallel/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c distances/dtw-basic.cpp -o distances/dtw-basic.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppParallel/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c distances/R-gateways.cpp -o distances/R-gateways.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppParallel/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c distances/soft-dtw.cpp -o distances/soft-dtw.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppParallel/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c distances/calculators.cpp -o distances/calculators.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppParallel/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c distances/logGAK.cpp -o distances/logGAK.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppParallel/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c distances/lbk.cpp -o distances/lbk.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppParallel/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c distances/lbi.cpp -o distances/lbi.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppParallel/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c tadpole/tadpole.cpp -o tadpole/tadpole.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o dtwclust.so ./utils/utils.o ./utils/R-utils.o ./utils/KahanSummer.o ./utils/UndirectedGraph.o ./utils/envelope.o ./centroids/dba.o ./centroids/sdtw-cent.o ./distmat/distmat-loop.o ./distmat/distmat.o ./distmat/fillers.o ./distmat/dtw-lb.o ./init.o ./distances/dtw-basic.o ./distances/R-gateways.o ./distances/soft-dtw.o ./distances/calculators.o ./distances/logGAK.o ./distances/lbk.o ./distances/lbi.o ./tadpole/tadpole.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [dtwclust.so] Error 1
+ERROR: compilation failed for package ‘dtwclust’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/dtwclust/new/dtwclust.Rcheck/dtwclust’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘dtwclust’ ...
+** package ‘dtwclust’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppParallel/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c utils/utils.cpp -o utils/utils.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppParallel/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c utils/R-utils.cpp -o utils/R-utils.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppParallel/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c utils/KahanSummer.cpp -o utils/KahanSummer.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppParallel/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c utils/UndirectedGraph.cpp -o utils/UndirectedGraph.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppParallel/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c utils/envelope.cpp -o utils/envelope.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppParallel/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c centroids/dba.cpp -o centroids/dba.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppParallel/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c centroids/sdtw-cent.cpp -o centroids/sdtw-cent.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppParallel/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c distmat/distmat-loop.cpp -o distmat/distmat-loop.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppParallel/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c distmat/distmat.cpp -o distmat/distmat.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppParallel/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c distmat/fillers.cpp -o distmat/fillers.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppParallel/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c distmat/dtw-lb.cpp -o distmat/dtw-lb.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppParallel/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c init.cpp -o init.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppParallel/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c distances/dtw-basic.cpp -o distances/dtw-basic.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppParallel/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c distances/R-gateways.cpp -o distances/R-gateways.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppParallel/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c distances/soft-dtw.cpp -o distances/soft-dtw.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppParallel/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c distances/calculators.cpp -o distances/calculators.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppParallel/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c distances/logGAK.cpp -o distances/logGAK.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppParallel/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c distances/lbk.cpp -o distances/lbk.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppParallel/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c distances/lbi.cpp -o distances/lbi.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dtwclust/RcppParallel/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c tadpole/tadpole.cpp -o tadpole/tadpole.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o dtwclust.so ./utils/utils.o ./utils/R-utils.o ./utils/KahanSummer.o ./utils/UndirectedGraph.o ./utils/envelope.o ./centroids/dba.o ./centroids/sdtw-cent.o ./distmat/distmat-loop.o ./distmat/distmat.o ./distmat/fillers.o ./distmat/dtw-lb.o ./init.o ./distances/dtw-basic.o ./distances/R-gateways.o ./distances/soft-dtw.o ./distances/calculators.o ./distances/logGAK.o ./distances/lbk.o ./distances/lbi.o ./tadpole/tadpole.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [dtwclust.so] Error 1
+ERROR: compilation failed for package ‘dtwclust’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/dtwclust/old/dtwclust.Rcheck/dtwclust’
+
+```
+# dynfrail
+
+
+
+* Version: 0.5.2
+* Source code: https://github.com/cran/dynfrail
+* Date/Publication: 2017-10-30 10:11:49 UTC
+* Number of recursive dependencies: 58
+
+Run `revdep_details(,"dynfrail")` for more info
+
+
+
+## In both
+
+* checking whether package ‘dynfrail’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/dynfrail/new/dynfrail.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘dynfrail’ ...
+** package ‘dynfrail’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dynfrail/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dynfrail/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp -fPIC -Wno-c++11-inline-namespace -c RcppExports.cpp -o RcppExports.o
+clang: error: unsupported option '-fopenmp'
+make: *** [RcppExports.o] Error 1
+ERROR: compilation failed for package ‘dynfrail’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/dynfrail/new/dynfrail.Rcheck/dynfrail’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘dynfrail’ ...
+** package ‘dynfrail’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dynfrail/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/dynfrail/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp -fPIC -Wno-c++11-inline-namespace -c RcppExports.cpp -o RcppExports.o
+clang: error: unsupported option '-fopenmp'
+make: *** [RcppExports.o] Error 1
+ERROR: compilation failed for package ‘dynfrail’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/dynfrail/old/dynfrail.Rcheck/dynfrail’
+
+```
+# exuber
+
+
+
+* Version: 0.2.1
+* Source code: https://github.com/cran/exuber
+* URL: https://github.com/kvasilopoulos/exuber
+* BugReports: https://github.com/kvasilopoulos/exuber/issues
+* Date/Publication: 2019-03-01 21:40:08 UTC
+* Number of recursive dependencies: 68
+
+Run `revdep_details(,"exuber")` for more info
+
+
+
+## In both
+
+* checking whether package ‘exuber’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/exuber/new/exuber.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘exuber’ ...
+** package ‘exuber’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/exuber/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/exuber/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/exuber/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/exuber/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c rls_gsadf.cpp -o rls_gsadf.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o exuber.so RcppExports.o rls_gsadf.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [exuber.so] Error 1
+ERROR: compilation failed for package ‘exuber’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/exuber/new/exuber.Rcheck/exuber’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘exuber’ ...
+** package ‘exuber’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/exuber/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/exuber/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/exuber/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/exuber/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c rls_gsadf.cpp -o rls_gsadf.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o exuber.so RcppExports.o rls_gsadf.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [exuber.so] Error 1
+ERROR: compilation failed for package ‘exuber’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/exuber/old/exuber.Rcheck/exuber’
+
+```
+# fastLink
+
+
+
+* Version: 0.5.0
+* Source code: https://github.com/cran/fastLink
+* BugReports: https://github.com/kosukeimai/fastLink/issues
+* Date/Publication: 2018-11-12 16:50:02 UTC
+* Number of recursive dependencies: 57
+
+Run `revdep_details(,"fastLink")` for more info
+
+
+
+## In both
+
+* checking whether package ‘fastLink’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/fastLink/new/fastLink.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘fastLink’ ...
+** package ‘fastLink’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/fastLink/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/fastLink/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/fastLink/RcppEigen/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp -fPIC -Wno-c++11-inline-namespace -c RcppExports.cpp -o RcppExports.o
+clang: error: unsupported option '-fopenmp'
+make: *** [RcppExports.o] Error 1
+ERROR: compilation failed for package ‘fastLink’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/fastLink/new/fastLink.Rcheck/fastLink’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘fastLink’ ...
+** package ‘fastLink’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/fastLink/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/fastLink/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/fastLink/RcppEigen/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp -fPIC -Wno-c++11-inline-namespace -c RcppExports.cpp -o RcppExports.o
+clang: error: unsupported option '-fopenmp'
+make: *** [RcppExports.o] Error 1
+ERROR: compilation failed for package ‘fastLink’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/fastLink/old/fastLink.Rcheck/fastLink’
+
+```
+# FindMyFriends
+
+
+
+* Version: 1.12.0
+* Source code: https://github.com/cran/FindMyFriends
+* URL: https://github.com/thomasp85/FindMyFriends
+* BugReports: https://github.com/thomasp85/FindMyFriends/issues
+* Date/Publication: 2018-10-30
+* Number of recursive dependencies: 81
+
+Run `revdep_details(,"FindMyFriends")` for more info
+
+
+
+## In both
+
+* R CMD check timed out
+
+
+* checking for code/documentation mismatches ... WARNING
+ ```
+ Functions or methods with usage in documentation object 'pgVirtual-class' but not in code:
+ ‘as’
+ ```
+
+* checking installed package size ... NOTE
+ ```
+ installed size is 5.7Mb
+ sub-directories of 1Mb or more:
+ R 1.0Mb
+ doc 1.5Mb
+ extdata 1.8Mb
+ libs 1.2Mb
+ ```
+
+* checking dependencies in R code ... NOTE
+ ```
+ Unexported objects imported by ':::' calls:
+ ‘gtable:::insert.unit’ ‘gtable:::z_arrange_gtables’
+ See the note in ?`:::` about the use of this operator.
+ ```
+
+# fourierin
+
+
+
+* Version: 0.2.4
+* Source code: https://github.com/cran/fourierin
+* URL: http://github.com/gbasulto/fourierin
+* BugReports: https://github.com/gbasulto/fourierin/issues
+* Date/Publication: 2019-04-07 12:22:43 UTC
+* Number of recursive dependencies: 53
+
+Run `revdep_details(,"fourierin")` for more info
+
+
+
+## In both
+
+* checking whether package ‘fourierin’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/fourierin/new/fourierin.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘fourierin’ ...
+** package ‘fourierin’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/fourierin/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/fourierin/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c RcppExports.cpp -o RcppExports.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/fourierin/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/fourierin/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c fourierin_1d.cpp -o fourierin_1d.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/fourierin/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/fourierin/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c fourierin_2d.cpp -o fourierin_2d.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/fourierin/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/fourierin/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c fourierin_cx_1d.cpp -o fourierin_cx_1d.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/fourierin/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/fourierin/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c fourierin_cx_2d.cpp -o fourierin_cx_2d.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/fourierin/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/fourierin/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c fourierin_cx_nd.cpp -o fourierin_cx_nd.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o fourierin.so RcppExports.o fourierin_1d.o fourierin_2d.o fourierin_cx_1d.o fourierin_cx_2d.o fourierin_cx_nd.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [fourierin.so] Error 1
+ERROR: compilation failed for package ‘fourierin’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/fourierin/new/fourierin.Rcheck/fourierin’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘fourierin’ ...
+** package ‘fourierin’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/fourierin/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/fourierin/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c RcppExports.cpp -o RcppExports.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/fourierin/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/fourierin/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c fourierin_1d.cpp -o fourierin_1d.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/fourierin/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/fourierin/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c fourierin_2d.cpp -o fourierin_2d.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/fourierin/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/fourierin/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c fourierin_cx_1d.cpp -o fourierin_cx_1d.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/fourierin/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/fourierin/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c fourierin_cx_2d.cpp -o fourierin_cx_2d.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/fourierin/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/fourierin/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c fourierin_cx_nd.cpp -o fourierin_cx_nd.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o fourierin.so RcppExports.o fourierin_1d.o fourierin_2d.o fourierin_cx_1d.o fourierin_cx_2d.o fourierin_cx_nd.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [fourierin.so] Error 1
+ERROR: compilation failed for package ‘fourierin’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/fourierin/old/fourierin.Rcheck/fourierin’
+
+```
+# FSelectorRcpp
+
+
+
+* Version: 0.3.1
+* Source code: https://github.com/cran/FSelectorRcpp
+* URL: http://mi2-warsaw.github.io/FSelectorRcpp/
+* BugReports: https://github.com/mi2-warsaw/FSelectorRcpp/issues
+* Date/Publication: 2019-04-22 11:40:08 UTC
+* Number of recursive dependencies: 129
+
+Run `revdep_details(,"FSelectorRcpp")` for more info
+
+
+
+## In both
+
+* checking whether package ‘FSelectorRcpp’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/FSelectorRcpp/new/FSelectorRcpp.Rcheck/00install.out’ for details.
+ ```
+
+* checking package dependencies ... NOTE
+ ```
+ Package suggested but not available for checking: ‘RTCGA.rnaseq’
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘FSelectorRcpp’ ...
+** package ‘FSelectorRcpp’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/FSelectorRcpp/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/FSelectorRcpp/BH/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/FSelectorRcpp/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/FSelectorRcpp/testthat/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp -I../inst/include -fPIC -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o
+clang: error: unsupported option '-fopenmp'
+make: *** [RcppExports.o] Error 1
+ERROR: compilation failed for package ‘FSelectorRcpp’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/FSelectorRcpp/new/FSelectorRcpp.Rcheck/FSelectorRcpp’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘FSelectorRcpp’ ...
+** package ‘FSelectorRcpp’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/FSelectorRcpp/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/FSelectorRcpp/BH/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/FSelectorRcpp/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/FSelectorRcpp/testthat/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp -I../inst/include -fPIC -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o
+clang: error: unsupported option '-fopenmp'
+make: *** [RcppExports.o] Error 1
+ERROR: compilation failed for package ‘FSelectorRcpp’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/FSelectorRcpp/old/FSelectorRcpp.Rcheck/FSelectorRcpp’
+
+```
+# GenomicMating
+
+
+
+* Version: 2.0
+* Source code: https://github.com/cran/GenomicMating
+* Date/Publication: 2018-07-01 23:00:03 UTC
+* Number of recursive dependencies: 76
+
+Run `revdep_details(,"GenomicMating")` for more info
+
+
+
+## In both
+
+* checking whether package ‘GenomicMating’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/GenomicMating/new/GenomicMating.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘GenomicMating’ ...
+** package ‘GenomicMating’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/GenomicMating/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/GenomicMating/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c MatingPrograms.cpp -o MatingPrograms.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/GenomicMating/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/GenomicMating/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c RcppExports.cpp -o RcppExports.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o GenomicMating.so MatingPrograms.o RcppExports.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [GenomicMating.so] Error 1
+ERROR: compilation failed for package ‘GenomicMating’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/GenomicMating/new/GenomicMating.Rcheck/GenomicMating’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘GenomicMating’ ...
+** package ‘GenomicMating’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/GenomicMating/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/GenomicMating/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c MatingPrograms.cpp -o MatingPrograms.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/GenomicMating/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/GenomicMating/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c RcppExports.cpp -o RcppExports.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o GenomicMating.so MatingPrograms.o RcppExports.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [GenomicMating.so] Error 1
+ERROR: compilation failed for package ‘GenomicMating’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/GenomicMating/old/GenomicMating.Rcheck/GenomicMating’
+
+```
+# ggstatsplot
+
+
+
+* Version:
+* Source code: ???
+* URL: http://dplyr.tidyverse.org, https://github.com/tidyverse/dplyr
+* BugReports: https://github.com/tidyverse/dplyr/issues
+* Number of recursive dependencies: 0
+
+Run `revdep_details(,"")` for more info
+
+
+
+## Error before installation
+
+### Devel
+
+```
+
+
+
+
+
+
+```
+### CRAN
+
+```
+
+
+
+
+
+
+```
+# goldi
+
+
+
+* Version: 1.0.1
+* Source code: https://github.com/cran/goldi
+* URL: https://github.com/Chris1221/goldi
+* BugReports: https://github.com/Chris1221/goldi/issues
+* Date/Publication: 2017-06-28 15:06:20 UTC
+* Number of recursive dependencies: 57
+
+Run `revdep_details(,"goldi")` for more info
+
+
+
+## In both
+
+* checking whether package ‘goldi’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/goldi/new/goldi.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘goldi’ ...
+** package ‘goldi’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/goldi/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/goldi/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -I../inst/include -DARMA_64BIT_WORD -fPIC -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/goldi/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/goldi/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -I../inst/include -DARMA_64BIT_WORD -fPIC -Wall -g -O2 -c match.cpp -o match.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o goldi.so RcppExports.o match.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [goldi.so] Error 1
+ERROR: compilation failed for package ‘goldi’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/goldi/new/goldi.Rcheck/goldi’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘goldi’ ...
+** package ‘goldi’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/goldi/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/goldi/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -I../inst/include -DARMA_64BIT_WORD -fPIC -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/goldi/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/goldi/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -I../inst/include -DARMA_64BIT_WORD -fPIC -Wall -g -O2 -c match.cpp -o match.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o goldi.so RcppExports.o match.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [goldi.so] Error 1
+ERROR: compilation failed for package ‘goldi’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/goldi/old/goldi.Rcheck/goldi’
+
+```
+# graphicalVAR
+
+
+
+* Version: 0.2.2
+* Source code: https://github.com/cran/graphicalVAR
+* Date/Publication: 2018-06-16 19:28:45 UTC
+* Number of recursive dependencies: 93
+
+Run `revdep_details(,"graphicalVAR")` for more info
+
+
+
+## In both
+
+* checking whether package ‘graphicalVAR’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/graphicalVAR/new/graphicalVAR.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘graphicalVAR’ ...
+** package ‘graphicalVAR’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/graphicalVAR/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/graphicalVAR/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp -fPIC -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o
+clang: error: unsupported option '-fopenmp'
+make: *** [RcppExports.o] Error 1
+ERROR: compilation failed for package ‘graphicalVAR’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/graphicalVAR/new/graphicalVAR.Rcheck/graphicalVAR’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘graphicalVAR’ ...
+** package ‘graphicalVAR’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/graphicalVAR/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/graphicalVAR/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp -fPIC -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o
+clang: error: unsupported option '-fopenmp'
+make: *** [RcppExports.o] Error 1
+ERROR: compilation failed for package ‘graphicalVAR’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/graphicalVAR/old/graphicalVAR.Rcheck/graphicalVAR’
+
+```
+# grasp2db
+
+
+
+* Version: 1.1.0
+* Source code: https://github.com/cran/grasp2db
+* Number of recursive dependencies: 182
+
+Run `revdep_details(,"grasp2db")` for more info
+
+
+
+## In both
+
+* R CMD check timed out
+
+
+* checking for missing documentation entries ... WARNING
+ ```
+ Undocumented code objects:
+ ‘GRASP2’ ‘checkAnti’ ‘getJoinCompatible’
+ Undocumented data sets:
+ ‘mml10p_nox’ ‘uniqueGexNames2.0’ ‘uniquePPDnames2.0’
+ All user-level objects in a package should have documentation entries.
+ See chapter ‘Writing R documentation files’ in the ‘Writing R
+ Extensions’ manual.
+ ```
+
+* checking data for non-ASCII characters ... WARNING
+ ```
+ Warning: found non-ASCII string
+ 'Behet's disease' in object 'uniquePPDnames2.0'
+ ```
+
+* checking data for ASCII and uncompressed saves ... WARNING
+ ```
+
+ Note: significantly better compression could be obtained
+ by using R CMD build --resave-data
+ old_size new_size compress
+ mml10p_nox.rda 7.1Mb 2.8Mb xz
+ uniquePPDnames2.0.rda 17Kb 15Kb bzip2
+ ```
+
+* checking package dependencies ... NOTE
+ ```
+ Package which this enhances but not available for checking: ‘AnnotationHubData’
+ ```
+
+* checking installed package size ... NOTE
+ ```
+ installed size is 7.6Mb
+ sub-directories of 1Mb or more:
+ data 7.1Mb
+ ```
+
+* checking DESCRIPTION meta-information ... NOTE
+ ```
+ License components with restrictions not permitted:
+ Artistic-2.0 + file LICENSE
+ ```
+
+* checking R code for possible problems ... NOTE
+ ```
+ .grasp2ToAnnotationHub: no visible global function definition for
+ ‘outputFile’
+ checkAnti: no visible binding for global variable ‘chr_hg19’
+ getJoinCompatible: no visible binding for global variable ‘gwrngs19’
+ Undefined global functions or variables:
+ chr_hg19 gwrngs19 outputFile
+ ```
+
+# heatwaveR
+
+
+
+* Version: 0.3.6
+* Source code: https://github.com/cran/heatwaveR
+* URL: https://robwschlegel.github.io/heatwaveR/index.html, https://github.com/robwschlegel/heatwaveR
+* BugReports: https://github.com/robwschlegel/heatwaveR/issues
+* Date/Publication: 2019-01-16 20:30:03 UTC
+* Number of recursive dependencies: 109
+
+Run `revdep_details(,"heatwaveR")` for more info
+
+
+
+## In both
+
+* checking whether package ‘heatwaveR’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/heatwaveR/new/heatwaveR.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘heatwaveR’ ...
+** package ‘heatwaveR’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/heatwaveR/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/heatwaveR/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp -fPIC -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o
+clang: error: unsupported option '-fopenmp'
+make: *** [RcppExports.o] Error 1
+ERROR: compilation failed for package ‘heatwaveR’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/heatwaveR/new/heatwaveR.Rcheck/heatwaveR’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘heatwaveR’ ...
+** package ‘heatwaveR’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/heatwaveR/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/heatwaveR/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp -fPIC -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o
+clang: error: unsupported option '-fopenmp'
+make: *** [RcppExports.o] Error 1
+ERROR: compilation failed for package ‘heatwaveR’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/heatwaveR/old/heatwaveR.Rcheck/heatwaveR’
+
+```
+# HPAanalyze
+
+
+
+* Version: 1.0.0
+* Source code: https://github.com/cran/HPAanalyze
+* Date/Publication: 2018-10-30
+* Number of recursive dependencies: 91
+
+Run `revdep_details(,"HPAanalyze")` for more info
+
+
+
+## In both
+
+* checking whether package ‘HPAanalyze’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/HPAanalyze/new/HPAanalyze.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘HPAanalyze’ ...
+** using staged installation
+** R
+** data
+*** moving datasets to lazyload DB
+** inst
+** byte-compile and prepare package for lazy loading
+WARNING: Initial Java 12 release has broken JNI support and does NOT work. Use stable Java 11 (or watch for 12u if avaiable).
+ERROR: Java exception occurred during rJava bootstrap - see stderr for Java stack trace.
+Exception in thread "main" java.lang.NullPointerException
+ at java.base/jdk.internal.reflect.Reflection.verifyMemberAccess(Reflection.java:130)
+ at java.base/java.lang.reflect.AccessibleObject.slowVerifyAccess(AccessibleObject.java:673)
+ at java.base/java.lang.reflect.AccessibleObject.verifyAccess(AccessibleObject.java:666)
+ at java.base/java.lang.reflect.AccessibleObject.checkAccess(AccessibleObject.java:638)
+ at java.base/java.lang.reflect.Field.checkAccess(Field.java:1075)
+ at java.base/java.lang.reflect.Field.get(Field.java:416)
+Error: .onLoad failed in loadNamespace() for 'XLConnectJars', details:
+ call: .jcheck(silent = FALSE)
+ error: java.lang.NullPointerException.jcall(f, "Ljava/lang/Object;", "get", .jcast(ic, "java/lang/Object"))new("jobjRef", jobj = , jclass = "java/lang/NullPointerException")
+Execution halted
+ERROR: lazy loading failed for package ‘HPAanalyze’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/HPAanalyze/new/HPAanalyze.Rcheck/HPAanalyze’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘HPAanalyze’ ...
+** using staged installation
+** R
+** data
+*** moving datasets to lazyload DB
+** inst
+** byte-compile and prepare package for lazy loading
+WARNING: Initial Java 12 release has broken JNI support and does NOT work. Use stable Java 11 (or watch for 12u if avaiable).
+ERROR: Java exception occurred during rJava bootstrap - see stderr for Java stack trace.
+Exception in thread "main" java.lang.NullPointerException
+ at java.base/jdk.internal.reflect.Reflection.verifyMemberAccess(Reflection.java:130)
+ at java.base/java.lang.reflect.AccessibleObject.slowVerifyAccess(AccessibleObject.java:673)
+ at java.base/java.lang.reflect.AccessibleObject.verifyAccess(AccessibleObject.java:666)
+ at java.base/java.lang.reflect.AccessibleObject.checkAccess(AccessibleObject.java:638)
+ at java.base/java.lang.reflect.Field.checkAccess(Field.java:1075)
+ at java.base/java.lang.reflect.Field.get(Field.java:416)
+Error: .onLoad failed in loadNamespace() for 'XLConnectJars', details:
+ call: .jcheck(silent = FALSE)
+ error: java.lang.NullPointerException.jcall(f, "Ljava/lang/Object;", "get", .jcast(ic, "java/lang/Object"))new("jobjRef", jobj = , jclass = "java/lang/NullPointerException")
+Execution halted
+ERROR: lazy loading failed for package ‘HPAanalyze’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/HPAanalyze/old/HPAanalyze.Rcheck/HPAanalyze’
+
+```
+# iCNV
+
+
+
+* Version: 1.2.1
+* Source code: https://github.com/cran/iCNV
+* Date/Publication: 2019-01-04
+* Number of recursive dependencies: 86
+
+Run `revdep_details(,"iCNV")` for more info
+
+
+
+## In both
+
+* checking whether package ‘iCNV’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/iCNV/new/iCNV.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘iCNV’ ...
+** using staged installation
+** R
+** data
+*** moving datasets to lazyload DB
+** inst
+** byte-compile and prepare package for lazy loading
+Error: package ‘BSgenome.Hsapiens.UCSC.hg19’ required by ‘CODEX’ could not be found
+Execution halted
+ERROR: lazy loading failed for package ‘iCNV’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/iCNV/new/iCNV.Rcheck/iCNV’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘iCNV’ ...
+** using staged installation
+** R
+** data
+*** moving datasets to lazyload DB
+** inst
+** byte-compile and prepare package for lazy loading
+Error: package ‘BSgenome.Hsapiens.UCSC.hg19’ required by ‘CODEX’ could not be found
+Execution halted
+ERROR: lazy loading failed for package ‘iCNV’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/iCNV/old/iCNV.Rcheck/iCNV’
+
+```
+# idefix
+
+
+
+* Version: 0.3.3
+* Source code: https://github.com/cran/idefix
+* URL: https://github.com/traets/idefix
+* Date/Publication: 2018-11-09 14:20:08 UTC
+* Number of recursive dependencies: 55
+
+Run `revdep_details(,"idefix")` for more info
+
+
+
+## In both
+
+* checking whether package ‘idefix’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/idefix/new/idefix.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘idefix’ ...
+** package ‘idefix’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/idefix/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/idefix/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp -fPIC -Wall -g -O2 -c InfoDes_cpp.cpp -o InfoDes_cpp.o
+clang: error: unsupported option '-fopenmp'
+make: *** [InfoDes_cpp.o] Error 1
+ERROR: compilation failed for package ‘idefix’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/idefix/new/idefix.Rcheck/idefix’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘idefix’ ...
+** package ‘idefix’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/idefix/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/idefix/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp -fPIC -Wall -g -O2 -c InfoDes_cpp.cpp -o InfoDes_cpp.o
+clang: error: unsupported option '-fopenmp'
+make: *** [InfoDes_cpp.o] Error 1
+ERROR: compilation failed for package ‘idefix’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/idefix/old/idefix.Rcheck/idefix’
+
+```
+# ijtiff
+
+
+
+* Version: 1.5.0
+* Source code: https://github.com/cran/ijtiff
+* URL: https://ropensci.github.io/ijtiff
+* BugReports: https://www.github.com/ropensci/ijtiff/issues
+* Date/Publication: 2018-10-31 11:20:03 UTC
+* Number of recursive dependencies: 75
+
+Run `revdep_details(,"ijtiff")` for more info
+
+
+
+## In both
+
+* checking whether package ‘ijtiff’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/ijtiff/new/ijtiff.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘ijtiff’ ...
+** package ‘ijtiff’ successfully unpacked and MD5 sums checked
+** using staged installation
+Package libtiff-4 was not found in the pkg-config search path.
+Perhaps you should add the directory containing `libtiff-4.pc'
+to the PKG_CONFIG_PATH environment variable
+No package 'libtiff-4' found
+Using PKG_CFLAGS=
+Using PKG_LIBS=-ltiff -ljpeg -lz
+------------------------- ANTICONF ERROR ---------------------------
+Configuration failed because libtiff-4 was not found. Try installing:
+ * deb: libtiff-dev (Debian, Ubuntu, etc)
+ * rpm: libtiff-devel (Fedora, EPEL)
+ * brew: libtiff (OSX)
+If libtiff-4 is already installed, check that 'pkg-config' is in your
+PATH and PKG_CONFIG_PATH contains a libtiff-4.pc file. If pkg-config
+is unavailable you can set INCLUDE_DIR and LIB_DIR manually via:
+R CMD INSTALL --configure-vars='INCLUDE_DIR=... LIB_DIR=...'
+--------------------------------------------------------------------
+ERROR: configuration failed for package ‘ijtiff’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/ijtiff/new/ijtiff.Rcheck/ijtiff’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘ijtiff’ ...
+** package ‘ijtiff’ successfully unpacked and MD5 sums checked
+** using staged installation
+Package libtiff-4 was not found in the pkg-config search path.
+Perhaps you should add the directory containing `libtiff-4.pc'
+to the PKG_CONFIG_PATH environment variable
+No package 'libtiff-4' found
+Using PKG_CFLAGS=
+Using PKG_LIBS=-ltiff -ljpeg -lz
+------------------------- ANTICONF ERROR ---------------------------
+Configuration failed because libtiff-4 was not found. Try installing:
+ * deb: libtiff-dev (Debian, Ubuntu, etc)
+ * rpm: libtiff-devel (Fedora, EPEL)
+ * brew: libtiff (OSX)
+If libtiff-4 is already installed, check that 'pkg-config' is in your
+PATH and PKG_CONFIG_PATH contains a libtiff-4.pc file. If pkg-config
+is unavailable you can set INCLUDE_DIR and LIB_DIR manually via:
+R CMD INSTALL --configure-vars='INCLUDE_DIR=... LIB_DIR=...'
+--------------------------------------------------------------------
+ERROR: configuration failed for package ‘ijtiff’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/ijtiff/old/ijtiff.Rcheck/ijtiff’
+
+```
+# iRF
+
+
+
+* Version: 2.0.0
+* Source code: https://github.com/cran/iRF
+* URL: https://arxiv.org/abs/1706.08457
+* Date/Publication: 2017-07-26 04:57:45 UTC
+* Number of recursive dependencies: 69
+
+Run `revdep_details(,"iRF")` for more info
+
+
+
+## In both
+
+* checking whether package ‘iRF’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/iRF/new/iRF.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘iRF’ ...
+** package ‘iRF’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/iRF/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp -fPIC -Wall -g -O2 -c ExportedFunctionsRIT.cpp -o ExportedFunctionsRIT.o
+clang: error: unsupported option '-fopenmp'
+make: *** [ExportedFunctionsRIT.o] Error 1
+ERROR: compilation failed for package ‘iRF’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/iRF/new/iRF.Rcheck/iRF’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘iRF’ ...
+** package ‘iRF’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/iRF/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp -fPIC -Wall -g -O2 -c ExportedFunctionsRIT.cpp -o ExportedFunctionsRIT.o
+clang: error: unsupported option '-fopenmp'
+make: *** [ExportedFunctionsRIT.o] Error 1
+ERROR: compilation failed for package ‘iRF’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/iRF/old/iRF.Rcheck/iRF’
+
+```
+# IrisSpatialFeatures
+
+
+
+* Version: 1.3.0
+* Source code: https://github.com/cran/IrisSpatialFeatures
+* Number of recursive dependencies: 75
+
+Run `revdep_details(,"IrisSpatialFeatures")` for more info
+
+
+
+## In both
+
+* R CMD check timed out
+
+
+# lilikoi
+
+
+
+* Version: 0.1.0
+* Source code: https://github.com/cran/lilikoi
+* URL: https://github.com/lanagarmire/lilikoi
+* BugReports: https://github.com/lanagarmire/lilikoi/issues
+* Date/Publication: 2018-07-30 11:10:03 UTC
+* Number of recursive dependencies: 128
+
+Run `revdep_details(,"lilikoi")` for more info
+
+
+
+## In both
+
+* checking whether package ‘lilikoi’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/lilikoi/new/lilikoi.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘lilikoi’ ...
+** package ‘lilikoi’ successfully unpacked and MD5 sums checked
+** using staged installation
+** R
+** data
+*** moving datasets to lazyload DB
+** inst
+** byte-compile and prepare package for lazy loading
+WARNING: Initial Java 12 release has broken JNI support and does NOT work. Use stable Java 11 (or watch for 12u if avaiable).
+ERROR: Java exception occurred during rJava bootstrap - see stderr for Java stack trace.
+Exception in thread "main" java.lang.NullPointerException
+ at java.base/jdk.internal.reflect.Reflection.verifyMemberAccess(Reflection.java:130)
+ at java.base/java.lang.reflect.AccessibleObject.slowVerifyAccess(AccessibleObject.java:673)
+ at java.base/java.lang.reflect.AccessibleObject.verifyAccess(AccessibleObject.java:666)
+ at java.base/java.lang.reflect.AccessibleObject.checkAccess(AccessibleObject.java:638)
+ at java.base/java.lang.reflect.Field.checkAccess(Field.java:1075)
+ at java.base/java.lang.reflect.Field.get(Field.java:416)
+Error: .onLoad failed in loadNamespace() for 'RWekajars', details:
+ call: .jcheck(silent = FALSE)
+ error: java.lang.NullPointerException.jcall(f, "Ljava/lang/Object;", "get", .jcast(ic, "java/lang/Object"))new("jobjRef", jobj = , jclass = "java/lang/NullPointerException")
+Execution halted
+ERROR: lazy loading failed for package ‘lilikoi’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/lilikoi/new/lilikoi.Rcheck/lilikoi’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘lilikoi’ ...
+** package ‘lilikoi’ successfully unpacked and MD5 sums checked
+** using staged installation
+** R
+** data
+*** moving datasets to lazyload DB
+** inst
+** byte-compile and prepare package for lazy loading
+WARNING: Initial Java 12 release has broken JNI support and does NOT work. Use stable Java 11 (or watch for 12u if avaiable).
+ERROR: Java exception occurred during rJava bootstrap - see stderr for Java stack trace.
+Exception in thread "main" java.lang.NullPointerException
+ at java.base/jdk.internal.reflect.Reflection.verifyMemberAccess(Reflection.java:130)
+ at java.base/java.lang.reflect.AccessibleObject.slowVerifyAccess(AccessibleObject.java:673)
+ at java.base/java.lang.reflect.AccessibleObject.verifyAccess(AccessibleObject.java:666)
+ at java.base/java.lang.reflect.AccessibleObject.checkAccess(AccessibleObject.java:638)
+ at java.base/java.lang.reflect.Field.checkAccess(Field.java:1075)
+ at java.base/java.lang.reflect.Field.get(Field.java:416)
+Error: .onLoad failed in loadNamespace() for 'RWekajars', details:
+ call: .jcheck(silent = FALSE)
+ error: java.lang.NullPointerException.jcall(f, "Ljava/lang/Object;", "get", .jcast(ic, "java/lang/Object"))new("jobjRef", jobj = , jclass = "java/lang/NullPointerException")
+Execution halted
+ERROR: lazy loading failed for package ‘lilikoi’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/lilikoi/old/lilikoi.Rcheck/lilikoi’
+
+```
+# LLSR
+
+
+
+* Version: 0.0.2.19
+* Source code: https://github.com/cran/LLSR
+* URL: https://CRAN.R-project.org/package=LLSR
+* BugReports: https://github.com/diegofcoelho/LLSR/issues
+* Date/Publication: 2019-03-05 22:20:11 UTC
+* Number of recursive dependencies: 51
+
+Run `revdep_details(,"LLSR")` for more info
+
+
+
+## In both
+
+* checking whether package ‘LLSR’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/LLSR/new/LLSR.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘LLSR’ ...
+** package ‘LLSR’ successfully unpacked and MD5 sums checked
+** using staged installation
+** R
+** data
+*** moving datasets to lazyload DB
+** inst
+** byte-compile and prepare package for lazy loading
+WARNING: Initial Java 12 release has broken JNI support and does NOT work. Use stable Java 11 (or watch for 12u if avaiable).
+ERROR: Java exception occurred during rJava bootstrap - see stderr for Java stack trace.
+Exception in thread "main" java.lang.NullPointerException
+ at java.base/jdk.internal.reflect.Reflection.verifyMemberAccess(Reflection.java:130)
+ at java.base/java.lang.reflect.AccessibleObject.slowVerifyAccess(AccessibleObject.java:673)
+ at java.base/java.lang.reflect.AccessibleObject.verifyAccess(AccessibleObject.java:666)
+ at java.base/java.lang.reflect.AccessibleObject.checkAccess(AccessibleObject.java:638)
+ at java.base/java.lang.reflect.Field.checkAccess(Field.java:1075)
+ at java.base/java.lang.reflect.Field.get(Field.java:416)
+Error: .onLoad failed in loadNamespace() for 'XLConnectJars', details:
+ call: .jcheck(silent = FALSE)
+ error: java.lang.NullPointerException.jcall(f, "Ljava/lang/Object;", "get", .jcast(ic, "java/lang/Object"))new("jobjRef", jobj = , jclass = "java/lang/NullPointerException")
+Execution halted
+ERROR: lazy loading failed for package ‘LLSR’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/LLSR/new/LLSR.Rcheck/LLSR’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘LLSR’ ...
+** package ‘LLSR’ successfully unpacked and MD5 sums checked
+** using staged installation
+** R
+** data
+*** moving datasets to lazyload DB
+** inst
+** byte-compile and prepare package for lazy loading
+WARNING: Initial Java 12 release has broken JNI support and does NOT work. Use stable Java 11 (or watch for 12u if avaiable).
+ERROR: Java exception occurred during rJava bootstrap - see stderr for Java stack trace.
+Exception in thread "main" java.lang.NullPointerException
+ at java.base/jdk.internal.reflect.Reflection.verifyMemberAccess(Reflection.java:130)
+ at java.base/java.lang.reflect.AccessibleObject.slowVerifyAccess(AccessibleObject.java:673)
+ at java.base/java.lang.reflect.AccessibleObject.verifyAccess(AccessibleObject.java:666)
+ at java.base/java.lang.reflect.AccessibleObject.checkAccess(AccessibleObject.java:638)
+ at java.base/java.lang.reflect.Field.checkAccess(Field.java:1075)
+ at java.base/java.lang.reflect.Field.get(Field.java:416)
+Error: .onLoad failed in loadNamespace() for 'XLConnectJars', details:
+ call: .jcheck(silent = FALSE)
+ error: java.lang.NullPointerException.jcall(f, "Ljava/lang/Object;", "get", .jcast(ic, "java/lang/Object"))new("jobjRef", jobj = , jclass = "java/lang/NullPointerException")
+Execution halted
+ERROR: lazy loading failed for package ‘LLSR’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/LLSR/old/LLSR.Rcheck/LLSR’
+
+```
+# lpirfs
+
+
+
+* Version: 0.1.5
+* Source code: https://github.com/cran/lpirfs
+* BugReports: https://github.com/adaemmerp/lpirfs/issues
+* Date/Publication: 2019-04-11 12:52:44 UTC
+* Number of recursive dependencies: 74
+
+Run `revdep_details(,"lpirfs")` for more info
+
+
+
+## In both
+
+* checking whether package ‘lpirfs’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/lpirfs/new/lpirfs.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘lpirfs’ ...
+** package ‘lpirfs’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include/ -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/lpirfs/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/lpirfs/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp -fPIC -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o
+clang: error: unsupported option '-fopenmp'
+make: *** [RcppExports.o] Error 1
+ERROR: compilation failed for package ‘lpirfs’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/lpirfs/new/lpirfs.Rcheck/lpirfs’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘lpirfs’ ...
+** package ‘lpirfs’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include/ -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/lpirfs/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/lpirfs/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp -fPIC -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o
+clang: error: unsupported option '-fopenmp'
+make: *** [RcppExports.o] Error 1
+ERROR: compilation failed for package ‘lpirfs’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/lpirfs/old/lpirfs.Rcheck/lpirfs’
+
+```
+# mbgraphic
+
+
+
+* Version: 1.0.1
+* Source code: https://github.com/cran/mbgraphic
+* Date/Publication: 2019-04-28 19:20:03 UTC
+* Number of recursive dependencies: 99
+
+Run `revdep_details(,"mbgraphic")` for more info
+
+
+
+## In both
+
+* checking whether package ‘mbgraphic’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/mbgraphic/new/mbgraphic.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘mbgraphic’ ...
+** package ‘mbgraphic’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mbgraphic/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c RcppExports.cpp -o RcppExports.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mbgraphic/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c cmasum.cpp -o cmasum.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mbgraphic/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c mbgraphic_init.c -o mbgraphic_init.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mbgraphic/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c variableflip.cpp -o variableflip.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o mbgraphic.so RcppExports.o cmasum.o mbgraphic_init.o variableflip.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+installing to /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/mbgraphic/new/mbgraphic.Rcheck/00LOCK-mbgraphic/00new/mbgraphic/libs
+** R
+** data
+*** moving datasets to lazyload DB
+** inst
+** byte-compile and prepare package for lazy loading
+WARNING: Initial Java 12 release has broken JNI support and does NOT work. Use stable Java 11 (or watch for 12u if avaiable).
+ERROR: Java exception occurred during rJava bootstrap - see stderr for Java stack trace.
+Exception in thread "main" java.lang.NullPointerException
+ at java.base/jdk.internal.reflect.Reflection.verifyMemberAccess(Reflection.java:130)
+ at java.base/java.lang.reflect.AccessibleObject.slowVerifyAccess(AccessibleObject.java:673)
+ at java.base/java.lang.reflect.AccessibleObject.verifyAccess(AccessibleObject.java:666)
+ at java.base/java.lang.reflect.AccessibleObject.checkAccess(AccessibleObject.java:638)
+ at java.base/java.lang.reflect.Field.checkAccess(Field.java:1075)
+ at java.base/java.lang.reflect.Field.get(Field.java:416)
+Error: .onLoad failed in loadNamespace() for 'scagnostics', details:
+ call: .jcheck(silent = FALSE)
+ error: java.lang.NullPointerException.jcall(f, "Ljava/lang/Object;", "get", .jcast(ic, "java/lang/Object"))new("jobjRef", jobj = , jclass = "java/lang/NullPointerException")
+Execution halted
+ERROR: lazy loading failed for package ‘mbgraphic’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/mbgraphic/new/mbgraphic.Rcheck/mbgraphic’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘mbgraphic’ ...
+** package ‘mbgraphic’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mbgraphic/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c RcppExports.cpp -o RcppExports.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mbgraphic/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c cmasum.cpp -o cmasum.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mbgraphic/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c mbgraphic_init.c -o mbgraphic_init.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mbgraphic/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c variableflip.cpp -o variableflip.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o mbgraphic.so RcppExports.o cmasum.o mbgraphic_init.o variableflip.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+installing to /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/mbgraphic/old/mbgraphic.Rcheck/00LOCK-mbgraphic/00new/mbgraphic/libs
+** R
+** data
+*** moving datasets to lazyload DB
+** inst
+** byte-compile and prepare package for lazy loading
+WARNING: Initial Java 12 release has broken JNI support and does NOT work. Use stable Java 11 (or watch for 12u if avaiable).
+ERROR: Java exception occurred during rJava bootstrap - see stderr for Java stack trace.
+Exception in thread "main" java.lang.NullPointerException
+ at java.base/jdk.internal.reflect.Reflection.verifyMemberAccess(Reflection.java:130)
+ at java.base/java.lang.reflect.AccessibleObject.slowVerifyAccess(AccessibleObject.java:673)
+ at java.base/java.lang.reflect.AccessibleObject.verifyAccess(AccessibleObject.java:666)
+ at java.base/java.lang.reflect.AccessibleObject.checkAccess(AccessibleObject.java:638)
+ at java.base/java.lang.reflect.Field.checkAccess(Field.java:1075)
+ at java.base/java.lang.reflect.Field.get(Field.java:416)
+Error: .onLoad failed in loadNamespace() for 'scagnostics', details:
+ call: .jcheck(silent = FALSE)
+ error: java.lang.NullPointerException.jcall(f, "Ljava/lang/Object;", "get", .jcast(ic, "java/lang/Object"))new("jobjRef", jobj = , jclass = "java/lang/NullPointerException")
+Execution halted
+ERROR: lazy loading failed for package ‘mbgraphic’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/mbgraphic/old/mbgraphic.Rcheck/mbgraphic’
+
+```
+# miceFast
+
+
+
+* Version: 0.2.3
+* Source code: https://github.com/cran/miceFast
+* URL: https://github.com/Polkas/miceFast
+* BugReports: https://github.com/Polkas/miceFast/issues
+* Date/Publication: 2018-05-06 20:19:04 UTC
+* Number of recursive dependencies: 91
+
+Run `revdep_details(,"miceFast")` for more info
+
+
+
+## In both
+
+* checking whether package ‘miceFast’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/miceFast/new/miceFast.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘miceFast’ ...
+** package ‘miceFast’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/miceFast/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/miceFast/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp -fPIC -Wall -g -O2 -c R_funs.cpp -o R_funs.o
+clang: error: unsupported option '-fopenmp'
+make: *** [R_funs.o] Error 1
+ERROR: compilation failed for package ‘miceFast’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/miceFast/new/miceFast.Rcheck/miceFast’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘miceFast’ ...
+** package ‘miceFast’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/miceFast/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/miceFast/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp -fPIC -Wall -g -O2 -c R_funs.cpp -o R_funs.o
+clang: error: unsupported option '-fopenmp'
+make: *** [R_funs.o] Error 1
+ERROR: compilation failed for package ‘miceFast’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/miceFast/old/miceFast.Rcheck/miceFast’
+
+```
+# mleap
+
+
+
+* Version: 0.1.3
+* Source code: https://github.com/cran/mleap
+* URL: https://github.com/rstudio/mleap
+* BugReports: https://github.com/rstudio/mleap/issues
+* Date/Publication: 2018-11-01 09:40:03 UTC
+* Number of recursive dependencies: 69
+
+Run `revdep_details(,"mleap")` for more info
+
+
+
+## In both
+
+* checking whether package ‘mleap’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/mleap/new/mleap.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘mleap’ ...
+** package ‘mleap’ successfully unpacked and MD5 sums checked
+** using staged installation
+** R
+** inst
+** byte-compile and prepare package for lazy loading
+** help
+*** installing help indices
+** building package indices
+** testing if installed package can be loaded from temporary location
+WARNING: Initial Java 12 release has broken JNI support and does NOT work. Use stable Java 11 (or watch for 12u if avaiable).
+ERROR: Java exception occurred during rJava bootstrap - see stderr for Java stack trace.
+Exception in thread "main" java.lang.NullPointerException
+ at java.base/jdk.internal.reflect.Reflection.verifyMemberAccess(Reflection.java:130)
+ at java.base/java.lang.reflect.AccessibleObject.slowVerifyAccess(AccessibleObject.java:673)
+ at java.base/java.lang.reflect.AccessibleObject.verifyAccess(AccessibleObject.java:666)
+ at java.base/java.lang.reflect.AccessibleObject.checkAccess(AccessibleObject.java:638)
+ at java.base/java.lang.reflect.Field.checkAccess(Field.java:1075)
+ at java.base/java.lang.reflect.Field.get(Field.java:416)
+Error: package or namespace load failed for ‘mleap’:
+ .onLoad failed in loadNamespace() for 'mleap', details:
+ call: .jcheck(silent = FALSE)
+ error: java.lang.NullPointerException.jcall(f, "Ljava/lang/Object;", "get", .jcast(ic, "java/lang/Object"))new("jobjRef", jobj = , jclass = "java/lang/NullPointerException")
+Error: loading failed
+Execution halted
+ERROR: loading failed
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/mleap/new/mleap.Rcheck/mleap’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘mleap’ ...
+** package ‘mleap’ successfully unpacked and MD5 sums checked
+** using staged installation
+** R
+** inst
+** byte-compile and prepare package for lazy loading
+** help
+*** installing help indices
+** building package indices
+** testing if installed package can be loaded from temporary location
+WARNING: Initial Java 12 release has broken JNI support and does NOT work. Use stable Java 11 (or watch for 12u if avaiable).
+ERROR: Java exception occurred during rJava bootstrap - see stderr for Java stack trace.
+Exception in thread "main" java.lang.NullPointerException
+ at java.base/jdk.internal.reflect.Reflection.verifyMemberAccess(Reflection.java:130)
+ at java.base/java.lang.reflect.AccessibleObject.slowVerifyAccess(AccessibleObject.java:673)
+ at java.base/java.lang.reflect.AccessibleObject.verifyAccess(AccessibleObject.java:666)
+ at java.base/java.lang.reflect.AccessibleObject.checkAccess(AccessibleObject.java:638)
+ at java.base/java.lang.reflect.Field.checkAccess(Field.java:1075)
+ at java.base/java.lang.reflect.Field.get(Field.java:416)
+Error: package or namespace load failed for ‘mleap’:
+ .onLoad failed in loadNamespace() for 'mleap', details:
+ call: .jcheck(silent = FALSE)
+ error: java.lang.NullPointerException.jcall(f, "Ljava/lang/Object;", "get", .jcast(ic, "java/lang/Object"))new("jobjRef", jobj = , jclass = "java/lang/NullPointerException")
+Error: loading failed
+Execution halted
+ERROR: loading failed
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/mleap/old/mleap.Rcheck/mleap’
+
+```
+# momentuHMM
+
+
+
+* Version: 1.4.3
+* Source code: https://github.com/cran/momentuHMM
+* Date/Publication: 2018-11-22 08:40:13 UTC
+* Number of recursive dependencies: 160
+
+Run `revdep_details(,"momentuHMM")` for more info
+
+
+
+## In both
+
+* checking whether package ‘momentuHMM’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/momentuHMM/new/momentuHMM.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘momentuHMM’ ...
+** package ‘momentuHMM’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/momentuHMM/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/momentuHMM/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c RcppExports.cpp -o RcppExports.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/momentuHMM/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/momentuHMM/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c XBloop.cpp -o XBloop.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/momentuHMM/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/momentuHMM/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c getDM.cpp -o getDM.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/momentuHMM/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/momentuHMM/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c momentuHMM_init.c -o momentuHMM_init.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/momentuHMM/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/momentuHMM/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c nLogLike.cpp -o nLogLike.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/momentuHMM/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/momentuHMM/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c trMatrix.cpp -o trMatrix.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o momentuHMM.so RcppExports.o XBloop.o getDM.o momentuHMM_init.o nLogLike.o trMatrix.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [momentuHMM.so] Error 1
+ERROR: compilation failed for package ‘momentuHMM’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/momentuHMM/new/momentuHMM.Rcheck/momentuHMM’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘momentuHMM’ ...
+** package ‘momentuHMM’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/momentuHMM/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/momentuHMM/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c RcppExports.cpp -o RcppExports.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/momentuHMM/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/momentuHMM/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c XBloop.cpp -o XBloop.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/momentuHMM/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/momentuHMM/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c getDM.cpp -o getDM.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/momentuHMM/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/momentuHMM/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c momentuHMM_init.c -o momentuHMM_init.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/momentuHMM/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/momentuHMM/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c nLogLike.cpp -o nLogLike.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/momentuHMM/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/momentuHMM/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c trMatrix.cpp -o trMatrix.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o momentuHMM.so RcppExports.o XBloop.o getDM.o momentuHMM_init.o nLogLike.o trMatrix.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [momentuHMM.so] Error 1
+ERROR: compilation failed for package ‘momentuHMM’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/momentuHMM/old/momentuHMM.Rcheck/momentuHMM’
+
+```
+# MonetDBLite
+
+
+
+* Version: 0.6.0
+* Source code: https://github.com/cran/MonetDBLite
+* URL: https://github.com/hannesmuehleisen/MonetDBLite-R
+* BugReports: https://github.com/hannesmuehleisen/MonetDBLite-R/issues
+* Date/Publication: 2018-07-27 09:40:03 UTC
+* Number of recursive dependencies: 73
+
+Run `revdep_details(,"MonetDBLite")` for more info
+
+
+
+## Newly broken
+
+* R CMD check timed out
+
+
+## Newly fixed
+
+* checking tests ...
+ ```
+ ERROR
+ Running the tests in ‘tests/testthat.R’ failed.
+ Last 13 lines of output:
+ round(confint(a, df = degf(rclus1))[2, 2], 2) not equal to 30808.26.
+ 1/1 mismatches
+ [1] 33252 - 30808 == 2443
+
+ ══ testthat results ═══════════════════════════════════════════════════════════
+ OK: 292 SKIPPED: 13 WARNINGS: 10 FAILED: 6
+ 1. Error: sample works (@test_04_dplyr.R#41)
+ 2. Failure: db allows svyby commands (@test_05_survey.R#60)
+ 3. Failure: db allows svyby commands (@test_05_survey.R#62)
+ 4. Failure: db allows svyby commands (@test_05_survey.R#66)
+ 5. Failure: db allows svyby commands (@test_05_survey.R#67)
+ 6. Failure: db allows svyby commands (@test_05_survey.R#69)
+
+ Error: testthat unit tests failed
+ Execution halted
+ ```
+
+## In both
+
+* checking installed package size ... NOTE
+ ```
+ installed size is 5.8Mb
+ sub-directories of 1Mb or more:
+ libs 5.4Mb
+ ```
+
+# morse
+
+
+
+* Version: 3.2.2
+* Source code: https://github.com/cran/morse
+* URL: https://cran.r-project.org/package=morse
+* BugReports: https://github.com/pveber/morse
+* Date/Publication: 2019-02-21 23:30:11 UTC
+* Number of recursive dependencies: 59
+
+Run `revdep_details(,"morse")` for more info
+
+
+
+## In both
+
+* checking whether package ‘morse’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/morse/new/morse.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘morse’ ...
+** package ‘morse’ successfully unpacked and MD5 sums checked
+** using staged installation
+** R
+** data
+*** moving datasets to lazyload DB
+** inst
+** byte-compile and prepare package for lazy loading
+Error: .onLoad failed in loadNamespace() for 'rjags', details:
+ call: dyn.load(file, DLLpath = DLLpath, ...)
+ error: unable to load shared object '/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/morse/rjags/libs/rjags.so':
+ dlopen(/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/morse/rjags/libs/rjags.so, 10): Library not loaded: /usr/local/lib/libjags.4.dylib
+ Referenced from: /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/morse/rjags/libs/rjags.so
+ Reason: image not found
+Execution halted
+ERROR: lazy loading failed for package ‘morse’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/morse/new/morse.Rcheck/morse’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘morse’ ...
+** package ‘morse’ successfully unpacked and MD5 sums checked
+** using staged installation
+** R
+** data
+*** moving datasets to lazyload DB
+** inst
+** byte-compile and prepare package for lazy loading
+Error: .onLoad failed in loadNamespace() for 'rjags', details:
+ call: dyn.load(file, DLLpath = DLLpath, ...)
+ error: unable to load shared object '/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/morse/rjags/libs/rjags.so':
+ dlopen(/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/morse/rjags/libs/rjags.so, 10): Library not loaded: /usr/local/lib/libjags.4.dylib
+ Referenced from: /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/morse/rjags/libs/rjags.so
+ Reason: image not found
+Execution halted
+ERROR: lazy loading failed for package ‘morse’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/morse/old/morse.Rcheck/morse’
+
+```
+# mrgsolve
+
+
+
+* Version: 0.9.0
+* Source code: https://github.com/cran/mrgsolve
+* URL: https://github.com/metrumresearchgroup/mrgsolve
+* BugReports: https://github.com/metrumresearchgroup/mrgsolve/issues
+* Date/Publication: 2019-01-23 16:40:03 UTC
+* Number of recursive dependencies: 39
+
+Run `revdep_details(,"mrgsolve")` for more info
+
+
+
+## In both
+
+* checking whether package ‘mrgsolve’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/mrgsolve/new/mrgsolve.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘mrgsolve’ ...
+** package ‘mrgsolve’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I../inst/base -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mrgsolve/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mrgsolve/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mrgsolve/BH/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c RcppExports.cpp -o RcppExports.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I../inst/base -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mrgsolve/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mrgsolve/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mrgsolve/BH/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c dataobject.cpp -o dataobject.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I../inst/base -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mrgsolve/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mrgsolve/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mrgsolve/BH/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c datarecord.cpp -o datarecord.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I../inst/base -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mrgsolve/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mrgsolve/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mrgsolve/BH/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c devtran.cpp -o devtran.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I../inst/base -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mrgsolve/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mrgsolve/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mrgsolve/BH/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c housemodel-mread-source.cpp -o housemodel-mread-source.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I../inst/base -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mrgsolve/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mrgsolve/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mrgsolve/BH/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c mrgsimq.cpp -o mrgsimq.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I../inst/base -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mrgsolve/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mrgsolve/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mrgsolve/BH/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c mrgsolve.cpp -o mrgsolve.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I../inst/base -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mrgsolve/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mrgsolve/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mrgsolve/BH/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c mrgsolve_init.cpp -o mrgsolve_init.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I../inst/base -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mrgsolve/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mrgsolve/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mrgsolve/BH/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c odepack_dlsoda.cpp -o odepack_dlsoda.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I../inst/base -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mrgsolve/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mrgsolve/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mrgsolve/BH/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c odeproblem.cpp -o odeproblem.o
+gfortran -fPIC -Wall -g -O2 -c opk_dlsoda_mrg.f -o opk_dlsoda_mrg.o
+opk_dlsoda_mrg.f:1435:0:
+
+ IF (IHIT) T = TCRIT
+
+Warning: 'ihit' may be used uninitialized in this function [-Wmaybe-uninitialized]
+opk_dlsoda_mrg.f:1131:0:
+
+ LEN1S = LEN1S + LENWM
+
+Warning: 'lenwm' may be used uninitialized in this function [-Wmaybe-uninitialized]
+gfortran -fPIC -Wall -g -O2 -c opkda1_mrg.f -o opkda1_mrg.o
+opkda1_mrg.f:477:40:
+
+ SUBROUTINE DSOLSY (WM, IWM, X, TEM)
+ 1
+Warning: Unused dummy argument 'tem' at (1) [-Wunused-dummy-argument]
+opkda1_mrg.f:1211:57:
+
+ SUBROUTINE DIPREP (NEQ, Y, RWORK, IA, JA, IPFLAG, F, JAC)
+ 1
+Warning: Unused dummy argument 'f' at (1) [-Wunused-dummy-argument]
+opkda1_mrg.f:1211:42:
+
+ SUBROUTINE DIPREP (NEQ, Y, RWORK, IA, JA, IPFLAG, F, JAC)
+ 1
+Warning: Unused dummy argument 'ia' at (1) [-Wunused-dummy-argument]
+opkda1_mrg.f:1211:46:
+
+ SUBROUTINE DIPREP (NEQ, Y, RWORK, IA, JA, IPFLAG, F, JAC)
+ 1
+Warning: Unused dummy argument 'ja' at (1) [-Wunused-dummy-argument]
+opkda1_mrg.f:1211:62:
+
+ SUBROUTINE DIPREP (NEQ, Y, RWORK, IA, JA, IPFLAG, F, JAC)
+ 1
+Warning: Unused dummy argument 'jac' at (1) [-Wunused-dummy-argument]
+opkda1_mrg.f:1211:28:
+
+ SUBROUTINE DIPREP (NEQ, Y, RWORK, IA, JA, IPFLAG, F, JAC)
+ 1
+Warning: Unused dummy argument 'neq' at (1) [-Wunused-dummy-argument]
+opkda1_mrg.f:1211:31:
+
+ SUBROUTINE DIPREP (NEQ, Y, RWORK, IA, JA, IPFLAG, F, JAC)
+ 1
+Warning: Unused dummy argument 'y' at (1) [-Wunused-dummy-argument]
+opkda1_mrg.f:1867:40:
+
+ SUBROUTINE DSOLSS (WK, IWK, X, TEM)
+ 1
+Warning: Unused dummy argument 'tem' at (1) [-Wunused-dummy-argument]
+opkda1_mrg.f:9282:40:
+
+ SUBROUTINE DSLSBT (WM, IWM, X, TEM)
+ 1
+Warning: Unused dummy argument 'tem' at (1) [-Wunused-dummy-argument]
+opkda1_mrg.f:9478:23:
+
+ 1 RES, JAC, ADDA)
+ 1
+Warning: Unused dummy argument 'adda' at (1) [-Wunused-dummy-argument]
+opkda1_mrg.f:9477:46:
+
+ SUBROUTINE DIPREPI (NEQ, Y, S, RWORK, IA, JA, IC, JC, IPFLAG,
+ 1
+Warning: Unused dummy argument 'ia' at (1) [-Wunused-dummy-argument]
+opkda1_mrg.f:9477:54:
+
+ SUBROUTINE DIPREPI (NEQ, Y, S, RWORK, IA, JA, IC, JC, IPFLAG,
+ 1
+Warning: Unused dummy argument 'ic' at (1) [-Wunused-dummy-argument]
+opkda1_mrg.f:9477:50:
+
+ SUBROUTINE DIPREPI (NEQ, Y, S, RWORK, IA, JA, IC, JC, IPFLAG,
+ 1
+Warning: Unused dummy argument 'ja' at (1) [-Wunused-dummy-argument]
+opkda1_mrg.f:9478:17:
+
+ 1 RES, JAC, ADDA)
+ 1
+Warning: Unused dummy argument 'jac' at (1) [-Wunused-dummy-argument]
+opkda1_mrg.f:9477:58:
+
+ SUBROUTINE DIPREPI (NEQ, Y, S, RWORK, IA, JA, IC, JC, IPFLAG,
+ 1
+Warning: Unused dummy argument 'jc' at (1) [-Wunused-dummy-argument]
+opkda1_mrg.f:9477:29:
+
+ SUBROUTINE DIPREPI (NEQ, Y, S, RWORK, IA, JA, IC, JC, IPFLAG,
+ 1
+Warning: Unused dummy argument 'neq' at (1) [-Wunused-dummy-argument]
+opkda1_mrg.f:9478:12:
+
+ 1 RES, JAC, ADDA)
+ 1
+Warning: Unused dummy argument 'res' at (1) [-Wunused-dummy-argument]
+opkda1_mrg.f:9477:35:
+
+ SUBROUTINE DIPREPI (NEQ, Y, S, RWORK, IA, JA, IC, JC, IPFLAG,
+ 1
+Warning: Unused dummy argument 's' at (1) [-Wunused-dummy-argument]
+opkda1_mrg.f:9477:32:
+
+ SUBROUTINE DIPREPI (NEQ, Y, S, RWORK, IA, JA, IC, JC, IPFLAG,
+ 1
+Warning: Unused dummy argument 'y' at (1) [-Wunused-dummy-argument]
+opkda1_mrg.f:6548:0:
+
+ IF (RHO .LE. BNRM .AND. MNEWT .EQ. 0) GO TO 150
+
+Warning: 'rho' may be used uninitialized in this function [-Wmaybe-uninitialized]
+opkda1_mrg.f:6104:0:
+
+ IF (RHO .LE. BNRM .AND. MNEWT .EQ. 0) GO TO 150
+
+Warning: 'rho' may be used uninitialized in this function [-Wmaybe-uninitialized]
+opkda1_mrg.f:2516:0:
+
+ 10 v(free) = ek
+
+Warning: 'free' may be used uninitialized in this function [-Wmaybe-uninitialized]
+gfortran -fPIC -Wall -g -O2 -c opkda2_mrg.f -o opkda2_mrg.o
+opkda2_mrg.f:1276:59:
+
+ SUBROUTINE XERRWD (MSG, NMES, NERR, LEVEL, NI, I1, I2, NR, R1, R2)
+ 1
+Warning: Unused dummy argument 'i2' at (1) [-Wunused-dummy-argument]
+opkda2_mrg.f:1276:40:
+
+ SUBROUTINE XERRWD (MSG, NMES, NERR, LEVEL, NI, I1, I2, NR, R1, R2)
+ 1
+Warning: Unused dummy argument 'nerr' at (1) [-Wunused-dummy-argument]
+opkda2_mrg.f:1276:71:
+
+ SUBROUTINE XERRWD (MSG, NMES, NERR, LEVEL, NI, I1, I2, NR, R1, R2)
+ 1
+Warning: Unused dummy argument 'r2' at (1) [-Wunused-dummy-argument]
+opkda2_mrg.f:1450:0:
+
+ INTEGER FUNCTION IXSAV (IPAR, IVALUE, ISET)
+
+Warning: '__result_ixsav' may be used uninitialized in this function [-Wmaybe-uninitialized]
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o mrgsolve.so RcppExports.o dataobject.o datarecord.o devtran.o housemodel-mread-source.o mrgsimq.o mrgsolve.o mrgsolve_init.o odepack_dlsoda.o odeproblem.o opk_dlsoda_mrg.o opkda1_mrg.o opkda2_mrg.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [mrgsolve.so] Error 1
+ERROR: compilation failed for package ‘mrgsolve’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/mrgsolve/new/mrgsolve.Rcheck/mrgsolve’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘mrgsolve’ ...
+** package ‘mrgsolve’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I../inst/base -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mrgsolve/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mrgsolve/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mrgsolve/BH/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c RcppExports.cpp -o RcppExports.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I../inst/base -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mrgsolve/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mrgsolve/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mrgsolve/BH/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c dataobject.cpp -o dataobject.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I../inst/base -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mrgsolve/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mrgsolve/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mrgsolve/BH/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c datarecord.cpp -o datarecord.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I../inst/base -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mrgsolve/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mrgsolve/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mrgsolve/BH/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c devtran.cpp -o devtran.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I../inst/base -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mrgsolve/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mrgsolve/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mrgsolve/BH/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c housemodel-mread-source.cpp -o housemodel-mread-source.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I../inst/base -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mrgsolve/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mrgsolve/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mrgsolve/BH/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c mrgsimq.cpp -o mrgsimq.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I../inst/base -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mrgsolve/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mrgsolve/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mrgsolve/BH/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c mrgsolve.cpp -o mrgsolve.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I../inst/base -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mrgsolve/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mrgsolve/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mrgsolve/BH/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c mrgsolve_init.cpp -o mrgsolve_init.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I../inst/base -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mrgsolve/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mrgsolve/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mrgsolve/BH/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c odepack_dlsoda.cpp -o odepack_dlsoda.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I../inst/base -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mrgsolve/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mrgsolve/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/mrgsolve/BH/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c odeproblem.cpp -o odeproblem.o
+gfortran -fPIC -Wall -g -O2 -c opk_dlsoda_mrg.f -o opk_dlsoda_mrg.o
+opk_dlsoda_mrg.f:1435:0:
+
+ IF (IHIT) T = TCRIT
+
+Warning: 'ihit' may be used uninitialized in this function [-Wmaybe-uninitialized]
+opk_dlsoda_mrg.f:1131:0:
+
+ LEN1S = LEN1S + LENWM
+
+Warning: 'lenwm' may be used uninitialized in this function [-Wmaybe-uninitialized]
+gfortran -fPIC -Wall -g -O2 -c opkda1_mrg.f -o opkda1_mrg.o
+opkda1_mrg.f:477:40:
+
+ SUBROUTINE DSOLSY (WM, IWM, X, TEM)
+ 1
+Warning: Unused dummy argument 'tem' at (1) [-Wunused-dummy-argument]
+opkda1_mrg.f:1211:57:
+
+ SUBROUTINE DIPREP (NEQ, Y, RWORK, IA, JA, IPFLAG, F, JAC)
+ 1
+Warning: Unused dummy argument 'f' at (1) [-Wunused-dummy-argument]
+opkda1_mrg.f:1211:42:
+
+ SUBROUTINE DIPREP (NEQ, Y, RWORK, IA, JA, IPFLAG, F, JAC)
+ 1
+Warning: Unused dummy argument 'ia' at (1) [-Wunused-dummy-argument]
+opkda1_mrg.f:1211:46:
+
+ SUBROUTINE DIPREP (NEQ, Y, RWORK, IA, JA, IPFLAG, F, JAC)
+ 1
+Warning: Unused dummy argument 'ja' at (1) [-Wunused-dummy-argument]
+opkda1_mrg.f:1211:62:
+
+ SUBROUTINE DIPREP (NEQ, Y, RWORK, IA, JA, IPFLAG, F, JAC)
+ 1
+Warning: Unused dummy argument 'jac' at (1) [-Wunused-dummy-argument]
+opkda1_mrg.f:1211:28:
+
+ SUBROUTINE DIPREP (NEQ, Y, RWORK, IA, JA, IPFLAG, F, JAC)
+ 1
+Warning: Unused dummy argument 'neq' at (1) [-Wunused-dummy-argument]
+opkda1_mrg.f:1211:31:
+
+ SUBROUTINE DIPREP (NEQ, Y, RWORK, IA, JA, IPFLAG, F, JAC)
+ 1
+Warning: Unused dummy argument 'y' at (1) [-Wunused-dummy-argument]
+opkda1_mrg.f:1867:40:
+
+ SUBROUTINE DSOLSS (WK, IWK, X, TEM)
+ 1
+Warning: Unused dummy argument 'tem' at (1) [-Wunused-dummy-argument]
+opkda1_mrg.f:9282:40:
+
+ SUBROUTINE DSLSBT (WM, IWM, X, TEM)
+ 1
+Warning: Unused dummy argument 'tem' at (1) [-Wunused-dummy-argument]
+opkda1_mrg.f:9478:23:
+
+ 1 RES, JAC, ADDA)
+ 1
+Warning: Unused dummy argument 'adda' at (1) [-Wunused-dummy-argument]
+opkda1_mrg.f:9477:46:
+
+ SUBROUTINE DIPREPI (NEQ, Y, S, RWORK, IA, JA, IC, JC, IPFLAG,
+ 1
+Warning: Unused dummy argument 'ia' at (1) [-Wunused-dummy-argument]
+opkda1_mrg.f:9477:54:
+
+ SUBROUTINE DIPREPI (NEQ, Y, S, RWORK, IA, JA, IC, JC, IPFLAG,
+ 1
+Warning: Unused dummy argument 'ic' at (1) [-Wunused-dummy-argument]
+opkda1_mrg.f:9477:50:
+
+ SUBROUTINE DIPREPI (NEQ, Y, S, RWORK, IA, JA, IC, JC, IPFLAG,
+ 1
+Warning: Unused dummy argument 'ja' at (1) [-Wunused-dummy-argument]
+opkda1_mrg.f:9478:17:
+
+ 1 RES, JAC, ADDA)
+ 1
+Warning: Unused dummy argument 'jac' at (1) [-Wunused-dummy-argument]
+opkda1_mrg.f:9477:58:
+
+ SUBROUTINE DIPREPI (NEQ, Y, S, RWORK, IA, JA, IC, JC, IPFLAG,
+ 1
+Warning: Unused dummy argument 'jc' at (1) [-Wunused-dummy-argument]
+opkda1_mrg.f:9477:29:
+
+ SUBROUTINE DIPREPI (NEQ, Y, S, RWORK, IA, JA, IC, JC, IPFLAG,
+ 1
+Warning: Unused dummy argument 'neq' at (1) [-Wunused-dummy-argument]
+opkda1_mrg.f:9478:12:
+
+ 1 RES, JAC, ADDA)
+ 1
+Warning: Unused dummy argument 'res' at (1) [-Wunused-dummy-argument]
+opkda1_mrg.f:9477:35:
+
+ SUBROUTINE DIPREPI (NEQ, Y, S, RWORK, IA, JA, IC, JC, IPFLAG,
+ 1
+Warning: Unused dummy argument 's' at (1) [-Wunused-dummy-argument]
+opkda1_mrg.f:9477:32:
+
+ SUBROUTINE DIPREPI (NEQ, Y, S, RWORK, IA, JA, IC, JC, IPFLAG,
+ 1
+Warning: Unused dummy argument 'y' at (1) [-Wunused-dummy-argument]
+opkda1_mrg.f:6548:0:
+
+ IF (RHO .LE. BNRM .AND. MNEWT .EQ. 0) GO TO 150
+
+Warning: 'rho' may be used uninitialized in this function [-Wmaybe-uninitialized]
+opkda1_mrg.f:6104:0:
+
+ IF (RHO .LE. BNRM .AND. MNEWT .EQ. 0) GO TO 150
+
+Warning: 'rho' may be used uninitialized in this function [-Wmaybe-uninitialized]
+opkda1_mrg.f:2516:0:
+
+ 10 v(free) = ek
+
+Warning: 'free' may be used uninitialized in this function [-Wmaybe-uninitialized]
+gfortran -fPIC -Wall -g -O2 -c opkda2_mrg.f -o opkda2_mrg.o
+opkda2_mrg.f:1276:59:
+
+ SUBROUTINE XERRWD (MSG, NMES, NERR, LEVEL, NI, I1, I2, NR, R1, R2)
+ 1
+Warning: Unused dummy argument 'i2' at (1) [-Wunused-dummy-argument]
+opkda2_mrg.f:1276:40:
+
+ SUBROUTINE XERRWD (MSG, NMES, NERR, LEVEL, NI, I1, I2, NR, R1, R2)
+ 1
+Warning: Unused dummy argument 'nerr' at (1) [-Wunused-dummy-argument]
+opkda2_mrg.f:1276:71:
+
+ SUBROUTINE XERRWD (MSG, NMES, NERR, LEVEL, NI, I1, I2, NR, R1, R2)
+ 1
+Warning: Unused dummy argument 'r2' at (1) [-Wunused-dummy-argument]
+opkda2_mrg.f:1450:0:
+
+ INTEGER FUNCTION IXSAV (IPAR, IVALUE, ISET)
+
+Warning: '__result_ixsav' may be used uninitialized in this function [-Wmaybe-uninitialized]
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o mrgsolve.so RcppExports.o dataobject.o datarecord.o devtran.o housemodel-mread-source.o mrgsimq.o mrgsolve.o mrgsolve_init.o odepack_dlsoda.o odeproblem.o opk_dlsoda_mrg.o opkda1_mrg.o opkda2_mrg.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [mrgsolve.so] Error 1
+ERROR: compilation failed for package ‘mrgsolve’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/mrgsolve/old/mrgsolve.Rcheck/mrgsolve’
+
+```
+# multiHiCcompare
+
+
+
+* Version: 1.0.0
+* Source code: https://github.com/cran/multiHiCcompare
+* Date/Publication: 2018-10-30
+* Number of recursive dependencies: 141
+
+Run `revdep_details(,"multiHiCcompare")` for more info
+
+
+
+## In both
+
+* checking whether package ‘multiHiCcompare’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/multiHiCcompare/new/multiHiCcompare.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘multiHiCcompare’ ...
+** using staged installation
+** R
+** data
+*** moving datasets to lazyload DB
+** inst
+** byte-compile and prepare package for lazy loading
+Error in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]]) :
+ there is no package called ‘KEGG.db’
+Calls: ... loadNamespace -> withRestarts -> withOneRestart -> doWithOneRestart
+Execution halted
+ERROR: lazy loading failed for package ‘multiHiCcompare’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/multiHiCcompare/new/multiHiCcompare.Rcheck/multiHiCcompare’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘multiHiCcompare’ ...
+** using staged installation
+** R
+** data
+*** moving datasets to lazyload DB
+** inst
+** byte-compile and prepare package for lazy loading
+Error in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]]) :
+ there is no package called ‘KEGG.db’
+Calls: ... loadNamespace -> withRestarts -> withOneRestart -> doWithOneRestart
+Execution halted
+ERROR: lazy loading failed for package ‘multiHiCcompare’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/multiHiCcompare/old/multiHiCcompare.Rcheck/multiHiCcompare’
+
+```
+# nlmixr
+
+
+
+* Version: 1.0.0-7
+* Source code: https://github.com/cran/nlmixr
+* URL: https://github.com/nlmixrdevelopment/nlmixr
+* Date/Publication: 2018-09-23 14:00:03 UTC
+* Number of recursive dependencies: 115
+
+Run `revdep_details(,"nlmixr")` for more info
+
+
+
+## In both
+
+* checking whether package ‘nlmixr’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/nlmixr/new/nlmixr.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘nlmixr’ ...
+** package ‘nlmixr’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/StanHeaders/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/BH/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c jj.c -o jj.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/StanHeaders/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/BH/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c jj.g.d_parser.c -o jj.g.d_parser.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/StanHeaders/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/BH/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c init.c -o init.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/StanHeaders/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/BH/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c rprintf.c -o rprintf.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/StanHeaders/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/BH/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c chkSolved.c -o chkSolved.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/StanHeaders/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/BH/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c merge3.c -o merge3.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/StanHeaders/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/BH/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -Id -I../inst/include -DBOOST_DISABLE_ASSERTS -I"`"/Library/Frameworks/R.framework/Resources/bin/Rscript" -e 'cat(file.path(find.package("RcppArmadillo"),"include"))'`" -fPIC -Wall -g -O2 -c neldermead.cpp -o neldermead.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/StanHeaders/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/BH/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -Id -I../inst/include -DBOOST_DISABLE_ASSERTS -I"`"/Library/Frameworks/R.framework/Resources/bin/Rscript" -e 'cat(file.path(find.package("RcppArmadillo"),"include"))'`" -fPIC -Wall -g -O2 -c slice.cpp -o slice.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/StanHeaders/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/BH/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -Id -I../inst/include -DBOOST_DISABLE_ASSERTS -I"`"/Library/Frameworks/R.framework/Resources/bin/Rscript" -e 'cat(file.path(find.package("RcppArmadillo"),"include"))'`" -fPIC -Wall -g -O2 -c RcppExportMod.cpp -o RcppExportMod.o
+In file included from RcppExportMod.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:1:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Core:535:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExportMod.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:2:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/LU:47:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExportMod.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Cholesky:12:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Jacobi:29:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExportMod.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Cholesky:43:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExportMod.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/QR:17:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Householder:27:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExportMod.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/SVD:48:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExportMod.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Geometry:58:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExportMod.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Eigenvalues:58:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExportMod.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Sparse:26:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/SparseCore:66:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExportMod.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Sparse:27:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/OrderingMethods:71:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExportMod.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Sparse:29:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/SparseCholesky:43:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExportMod.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Sparse:32:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/SparseQR:35:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExportMod.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Sparse:33:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/IterativeLinearSolvers:46:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExportMod.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:32:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/CholmodSupport:45:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExportMod.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:35:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/unsupported/Eigen/KroneckerProduct:34:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExportMod.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:39:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/unsupported/Eigen/Polynomials:135:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExportMod.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:40:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/unsupported/Eigen/SparseExtra:51:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+17 warnings generated.
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/StanHeaders/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/BH/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -Id -I../inst/include -DBOOST_DISABLE_ASSERTS -I"`"/Library/Frameworks/R.framework/Resources/bin/Rscript" -e 'cat(file.path(find.package("RcppArmadillo"),"include"))'`" -fPIC -Wall -g -O2 -c ode_cmt1.cpp -o ode_cmt1.o
+In file included from ode_cmt1.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:1:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Core:535:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from ode_cmt1.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:2:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/LU:47:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from ode_cmt1.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Cholesky:12:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Jacobi:29:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from ode_cmt1.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Cholesky:43:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from ode_cmt1.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/QR:17:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Householder:27:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from ode_cmt1.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/SVD:48:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from ode_cmt1.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Geometry:58:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from ode_cmt1.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Eigenvalues:58:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from ode_cmt1.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Sparse:26:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/SparseCore:66:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from ode_cmt1.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Sparse:27:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/OrderingMethods:71:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from ode_cmt1.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Sparse:29:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/SparseCholesky:43:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from ode_cmt1.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Sparse:32:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/SparseQR:35:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from ode_cmt1.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Sparse:33:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/IterativeLinearSolvers:46:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from ode_cmt1.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:32:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/CholmodSupport:45:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from ode_cmt1.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:35:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/unsupported/Eigen/KroneckerProduct:34:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from ode_cmt1.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:39:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/unsupported/Eigen/Polynomials:135:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from ode_cmt1.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:40:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/unsupported/Eigen/SparseExtra:51:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from ode_cmt1.cpp:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/StanHeaders/include/stan/math.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/StanHeaders/include/stan/math/rev/mat.hpp:12:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/StanHeaders/include/stan/math/prim/mat.hpp:276:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/StanHeaders/include/stan/math/prim/mat/prob/dirichlet_rng.hpp:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/BH/include/boost/random/gamma_distribution.hpp:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/BH/include/boost/random/exponential_distribution.hpp:27:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/BH/include/boost/random/detail/int_float_pair.hpp:26:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/BH/include/boost/random/detail/integer_log2.hpp:19:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/BH/include/boost/pending/integer_log2.hpp:7:1: warning: This header is deprecated. Use instead. [-W#pragma-messages]
+BOOST_HEADER_DEPRECATED("");
+^
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/BH/include/boost/config/header_deprecated.hpp:23:37: note: expanded from macro 'BOOST_HEADER_DEPRECATED'
+# define BOOST_HEADER_DEPRECATED(a) BOOST_PRAGMA_MESSAGE("This header is deprecated. Use " a " instead.")
+ ^
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/BH/include/boost/config/pragma_message.hpp:24:34: note: expanded from macro 'BOOST_PRAGMA_MESSAGE'
+# define BOOST_PRAGMA_MESSAGE(x) _Pragma(BOOST_STRINGIZE(message(x)))
+ ^
+:184:2: note: expanded from here
+ message("This header is deprecated. Use " "" " instead.")
+ ^
+In file included from ode_cmt1.cpp:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/StanHeaders/include/stan/math.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/StanHeaders/include/stan/math/rev/mat.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/StanHeaders/include/stan/math/rev/core.hpp:44:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/StanHeaders/include/stan/math/rev/core/set_zero_all_adjoints.hpp:14:13: warning: unused function 'set_zero_all_adjoints' [-Wunused-function]
+static void set_zero_all_adjoints() {
+ ^
+In file included from ode_cmt1.cpp:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/StanHeaders/include/stan/math.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/StanHeaders/include/stan/math/rev/mat.hpp:12:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/StanHeaders/include/stan/math/prim/mat.hpp:70:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/StanHeaders/include/stan/math/prim/mat/fun/autocorrelation.hpp:18:8: warning: function 'fft_next_good_size' is not needed and will not be emitted [-Wunneeded-internal-declaration]
+size_t fft_next_good_size(size_t N) {
+ ^
+20 warnings generated.
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/StanHeaders/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/BH/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -Id -I../inst/include -DBOOST_DISABLE_ASSERTS -I"`"/Library/Frameworks/R.framework/Resources/bin/Rscript" -e 'cat(file.path(find.package("RcppArmadillo"),"include"))'`" -fPIC -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o
+In file included from RcppExports.cpp:4:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:1:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Core:535:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:4:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:2:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/LU:47:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:4:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Cholesky:12:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Jacobi:29:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:4:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Cholesky:43:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:4:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/QR:17:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Householder:27:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:4:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/SVD:48:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:4:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Geometry:58:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:4:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Eigenvalues:58:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:4:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Sparse:26:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/SparseCore:66:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:4:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Sparse:27:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/OrderingMethods:71:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:4:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Sparse:29:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/SparseCholesky:43:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:4:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Sparse:32:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/SparseQR:35:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:4:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Sparse:33:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/IterativeLinearSolvers:46:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:4:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:32:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/CholmodSupport:45:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:4:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:35:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/unsupported/Eigen/KroneckerProduct:34:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:4:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:39:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/unsupported/Eigen/Polynomials:135:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:4:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:40:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/unsupported/Eigen/SparseExtra:51:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+17 warnings generated.
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/StanHeaders/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/BH/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -Id -I../inst/include -DBOOST_DISABLE_ASSERTS -I"`"/Library/Frameworks/R.framework/Resources/bin/Rscript" -e 'cat(file.path(find.package("RcppArmadillo"),"include"))'`" -fPIC -Wall -g -O2 -c resid.cpp -o resid.o
+In file included from resid.cpp:5:
+In file included from ../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:1:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Core:535:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from resid.cpp:5:
+In file included from ../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:2:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/LU:47:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from resid.cpp:5:
+In file included from ../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Cholesky:12:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Jacobi:29:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from resid.cpp:5:
+In file included from ../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Cholesky:43:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from resid.cpp:5:
+In file included from ../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/QR:17:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Householder:27:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from resid.cpp:5:
+In file included from ../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/SVD:48:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from resid.cpp:5:
+In file included from ../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Geometry:58:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from resid.cpp:5:
+In file included from ../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Eigenvalues:58:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from resid.cpp:5:
+In file included from ../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Sparse:26:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/SparseCore:66:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from resid.cpp:5:
+In file included from ../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Sparse:27:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/OrderingMethods:71:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from resid.cpp:5:
+In file included from ../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Sparse:29:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/SparseCholesky:43:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from resid.cpp:5:
+In file included from ../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Sparse:32:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/SparseQR:35:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from resid.cpp:5:
+In file included from ../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Sparse:33:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/IterativeLinearSolvers:46:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from resid.cpp:5:
+In file included from ../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:32:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/CholmodSupport:45:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from resid.cpp:5:
+In file included from ../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:35:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/unsupported/Eigen/KroneckerProduct:34:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from resid.cpp:5:
+In file included from ../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:39:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/unsupported/Eigen/Polynomials:135:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from resid.cpp:5:
+In file included from ../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:40:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/unsupported/Eigen/SparseExtra:51:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+17 warnings generated.
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o nlmixr.so jj.o jj.g.d_parser.o init.o rprintf.o chkSolved.o merge3.o neldermead.o slice.o RcppExportMod.o ode_cmt1.o RcppExports.o resid.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [nlmixr.so] Error 1
+ERROR: compilation failed for package ‘nlmixr’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/nlmixr/new/nlmixr.Rcheck/nlmixr’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘nlmixr’ ...
+** package ‘nlmixr’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/StanHeaders/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/BH/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c jj.c -o jj.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/StanHeaders/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/BH/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c jj.g.d_parser.c -o jj.g.d_parser.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/StanHeaders/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/BH/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c init.c -o init.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/StanHeaders/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/BH/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c rprintf.c -o rprintf.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/StanHeaders/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/BH/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c chkSolved.c -o chkSolved.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/StanHeaders/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/BH/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c merge3.c -o merge3.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/StanHeaders/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/BH/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -Id -I../inst/include -DBOOST_DISABLE_ASSERTS -I"`"/Library/Frameworks/R.framework/Resources/bin/Rscript" -e 'cat(file.path(find.package("RcppArmadillo"),"include"))'`" -fPIC -Wall -g -O2 -c neldermead.cpp -o neldermead.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/StanHeaders/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/BH/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -Id -I../inst/include -DBOOST_DISABLE_ASSERTS -I"`"/Library/Frameworks/R.framework/Resources/bin/Rscript" -e 'cat(file.path(find.package("RcppArmadillo"),"include"))'`" -fPIC -Wall -g -O2 -c slice.cpp -o slice.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/StanHeaders/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/BH/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -Id -I../inst/include -DBOOST_DISABLE_ASSERTS -I"`"/Library/Frameworks/R.framework/Resources/bin/Rscript" -e 'cat(file.path(find.package("RcppArmadillo"),"include"))'`" -fPIC -Wall -g -O2 -c RcppExportMod.cpp -o RcppExportMod.o
+In file included from RcppExportMod.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:1:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Core:535:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExportMod.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:2:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/LU:47:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExportMod.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Cholesky:12:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Jacobi:29:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExportMod.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Cholesky:43:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExportMod.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/QR:17:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Householder:27:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExportMod.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/SVD:48:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExportMod.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Geometry:58:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExportMod.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Eigenvalues:58:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExportMod.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Sparse:26:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/SparseCore:66:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExportMod.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Sparse:27:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/OrderingMethods:71:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExportMod.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Sparse:29:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/SparseCholesky:43:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExportMod.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Sparse:32:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/SparseQR:35:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExportMod.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Sparse:33:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/IterativeLinearSolvers:46:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExportMod.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:32:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/CholmodSupport:45:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExportMod.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:35:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/unsupported/Eigen/KroneckerProduct:34:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExportMod.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:39:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/unsupported/Eigen/Polynomials:135:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExportMod.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:40:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/unsupported/Eigen/SparseExtra:51:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+17 warnings generated.
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/StanHeaders/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/BH/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -Id -I../inst/include -DBOOST_DISABLE_ASSERTS -I"`"/Library/Frameworks/R.framework/Resources/bin/Rscript" -e 'cat(file.path(find.package("RcppArmadillo"),"include"))'`" -fPIC -Wall -g -O2 -c ode_cmt1.cpp -o ode_cmt1.o
+In file included from ode_cmt1.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:1:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Core:535:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from ode_cmt1.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:2:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/LU:47:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from ode_cmt1.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Cholesky:12:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Jacobi:29:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from ode_cmt1.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Cholesky:43:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from ode_cmt1.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/QR:17:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Householder:27:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from ode_cmt1.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/SVD:48:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from ode_cmt1.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Geometry:58:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from ode_cmt1.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Eigenvalues:58:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from ode_cmt1.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Sparse:26:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/SparseCore:66:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from ode_cmt1.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Sparse:27:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/OrderingMethods:71:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from ode_cmt1.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Sparse:29:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/SparseCholesky:43:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from ode_cmt1.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Sparse:32:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/SparseQR:35:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from ode_cmt1.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Sparse:33:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/IterativeLinearSolvers:46:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from ode_cmt1.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:32:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/CholmodSupport:45:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from ode_cmt1.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:35:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/unsupported/Eigen/KroneckerProduct:34:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from ode_cmt1.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:39:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/unsupported/Eigen/Polynomials:135:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from ode_cmt1.cpp:1:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:40:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/unsupported/Eigen/SparseExtra:51:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from ode_cmt1.cpp:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/StanHeaders/include/stan/math.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/StanHeaders/include/stan/math/rev/mat.hpp:12:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/StanHeaders/include/stan/math/prim/mat.hpp:276:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/StanHeaders/include/stan/math/prim/mat/prob/dirichlet_rng.hpp:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/BH/include/boost/random/gamma_distribution.hpp:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/BH/include/boost/random/exponential_distribution.hpp:27:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/BH/include/boost/random/detail/int_float_pair.hpp:26:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/BH/include/boost/random/detail/integer_log2.hpp:19:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/BH/include/boost/pending/integer_log2.hpp:7:1: warning: This header is deprecated. Use instead. [-W#pragma-messages]
+BOOST_HEADER_DEPRECATED("");
+^
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/BH/include/boost/config/header_deprecated.hpp:23:37: note: expanded from macro 'BOOST_HEADER_DEPRECATED'
+# define BOOST_HEADER_DEPRECATED(a) BOOST_PRAGMA_MESSAGE("This header is deprecated. Use " a " instead.")
+ ^
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/BH/include/boost/config/pragma_message.hpp:24:34: note: expanded from macro 'BOOST_PRAGMA_MESSAGE'
+# define BOOST_PRAGMA_MESSAGE(x) _Pragma(BOOST_STRINGIZE(message(x)))
+ ^
+:184:2: note: expanded from here
+ message("This header is deprecated. Use " "" " instead.")
+ ^
+In file included from ode_cmt1.cpp:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/StanHeaders/include/stan/math.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/StanHeaders/include/stan/math/rev/mat.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/StanHeaders/include/stan/math/rev/core.hpp:44:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/StanHeaders/include/stan/math/rev/core/set_zero_all_adjoints.hpp:14:13: warning: unused function 'set_zero_all_adjoints' [-Wunused-function]
+static void set_zero_all_adjoints() {
+ ^
+In file included from ode_cmt1.cpp:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/StanHeaders/include/stan/math.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/StanHeaders/include/stan/math/rev/mat.hpp:12:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/StanHeaders/include/stan/math/prim/mat.hpp:70:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/StanHeaders/include/stan/math/prim/mat/fun/autocorrelation.hpp:18:8: warning: function 'fft_next_good_size' is not needed and will not be emitted [-Wunneeded-internal-declaration]
+size_t fft_next_good_size(size_t N) {
+ ^
+20 warnings generated.
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/StanHeaders/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/BH/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -Id -I../inst/include -DBOOST_DISABLE_ASSERTS -I"`"/Library/Frameworks/R.framework/Resources/bin/Rscript" -e 'cat(file.path(find.package("RcppArmadillo"),"include"))'`" -fPIC -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o
+In file included from RcppExports.cpp:4:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:1:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Core:535:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:4:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:2:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/LU:47:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:4:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Cholesky:12:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Jacobi:29:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:4:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Cholesky:43:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:4:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/QR:17:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Householder:27:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:4:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/SVD:48:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:4:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Geometry:58:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:4:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Eigenvalues:58:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:4:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Sparse:26:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/SparseCore:66:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:4:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Sparse:27:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/OrderingMethods:71:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:4:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Sparse:29:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/SparseCholesky:43:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:4:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Sparse:32:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/SparseQR:35:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:4:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Sparse:33:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/IterativeLinearSolvers:46:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:4:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:32:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/CholmodSupport:45:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:4:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:35:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/unsupported/Eigen/KroneckerProduct:34:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:4:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:39:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/unsupported/Eigen/Polynomials:135:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:4:
+In file included from ./../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:40:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/unsupported/Eigen/SparseExtra:51:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+17 warnings generated.
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/StanHeaders/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/BH/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -Id -I../inst/include -DBOOST_DISABLE_ASSERTS -I"`"/Library/Frameworks/R.framework/Resources/bin/Rscript" -e 'cat(file.path(find.package("RcppArmadillo"),"include"))'`" -fPIC -Wall -g -O2 -c resid.cpp -o resid.o
+In file included from resid.cpp:5:
+In file included from ../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:1:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Core:535:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from resid.cpp:5:
+In file included from ../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:2:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/LU:47:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from resid.cpp:5:
+In file included from ../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Cholesky:12:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Jacobi:29:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from resid.cpp:5:
+In file included from ../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Cholesky:43:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from resid.cpp:5:
+In file included from ../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/QR:17:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Householder:27:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from resid.cpp:5:
+In file included from ../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/SVD:48:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from resid.cpp:5:
+In file included from ../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Geometry:58:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from resid.cpp:5:
+In file included from ../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Dense:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Eigenvalues:58:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from resid.cpp:5:
+In file included from ../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Sparse:26:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/SparseCore:66:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from resid.cpp:5:
+In file included from ../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Sparse:27:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/OrderingMethods:71:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from resid.cpp:5:
+In file included from ../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Sparse:29:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/SparseCholesky:43:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from resid.cpp:5:
+In file included from ../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Sparse:32:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/SparseQR:35:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from resid.cpp:5:
+In file included from ../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/Sparse:33:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/IterativeLinearSolvers:46:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from resid.cpp:5:
+In file included from ../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:32:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/CholmodSupport:45:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from resid.cpp:5:
+In file included from ../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:35:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/unsupported/Eigen/KroneckerProduct:34:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from resid.cpp:5:
+In file included from ../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:39:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/unsupported/Eigen/Polynomials:135:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from resid.cpp:5:
+In file included from ../inst/include/nlmixr_types.h:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/RcppEigenForward.h:40:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/unsupported/Eigen/SparseExtra:51:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/nlmixr/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+17 warnings generated.
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o nlmixr.so jj.o jj.g.d_parser.o init.o rprintf.o chkSolved.o merge3.o neldermead.o slice.o RcppExportMod.o ode_cmt1.o RcppExports.o resid.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [nlmixr.so] Error 1
+ERROR: compilation failed for package ‘nlmixr’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/nlmixr/old/nlmixr.Rcheck/nlmixr’
+
+```
+# openair
+
+
+
+* Version: 2.6-5
+* Source code: https://github.com/cran/openair
+* URL: http://davidcarslaw.github.io/openair/
+* BugReports: https://github.com/davidcarslaw/openair/issues
+* Date/Publication: 2019-04-08 14:30:04 UTC
+* Number of recursive dependencies: 38
+
+Run `revdep_details(,"openair")` for more info
+
+
+
+## In both
+
+* checking whether package ‘openair’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/openair/new/openair.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘openair’ ...
+** package ‘openair’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/openair/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c cluster.cpp -o cluster.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/openair/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c init.c -o init.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/openair/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c rolling.cpp -o rolling.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o openair.so cluster.o init.o rolling.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [openair.so] Error 1
+ERROR: compilation failed for package ‘openair’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/openair/new/openair.Rcheck/openair’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘openair’ ...
+** package ‘openair’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/openair/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c cluster.cpp -o cluster.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/openair/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c init.c -o init.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/openair/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c rolling.cpp -o rolling.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o openair.so cluster.o init.o rolling.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [openair.so] Error 1
+ERROR: compilation failed for package ‘openair’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/openair/old/openair.Rcheck/openair’
+
+```
+# pccc
+
+
+
+* Version: 1.0.2
+* Source code: https://github.com/cran/pccc
+* URL: https://github.com/CUD2V/pccc
+* BugReports: https://github.com/CUD2V/pccc/issues
+* Date/Publication: 2018-07-02 19:40:03 UTC
+* Number of recursive dependencies: 47
+
+Run `revdep_details(,"pccc")` for more info
+
+
+
+## In both
+
+* checking whether package ‘pccc’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/pccc/new/pccc.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘pccc’ ...
+** package ‘pccc’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/pccc/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -I../inst/include -DARMA_64BIT_WORD -fPIC -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/pccc/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -I../inst/include -DARMA_64BIT_WORD -fPIC -Wall -g -O2 -c ccc.cpp -o ccc.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/pccc/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -I../inst/include -DARMA_64BIT_WORD -fPIC -Wall -g -O2 -c get_codes.cpp -o get_codes.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/pccc/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -I../inst/include -DARMA_64BIT_WORD -fPIC -Wall -g -O2 -c pccc.cpp -o pccc.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o pccc.so RcppExports.o ccc.o get_codes.o pccc.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [pccc.so] Error 1
+ERROR: compilation failed for package ‘pccc’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/pccc/new/pccc.Rcheck/pccc’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘pccc’ ...
+** package ‘pccc’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/pccc/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -I../inst/include -DARMA_64BIT_WORD -fPIC -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/pccc/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -I../inst/include -DARMA_64BIT_WORD -fPIC -Wall -g -O2 -c ccc.cpp -o ccc.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/pccc/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -I../inst/include -DARMA_64BIT_WORD -fPIC -Wall -g -O2 -c get_codes.cpp -o get_codes.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/pccc/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -I../inst/include -DARMA_64BIT_WORD -fPIC -Wall -g -O2 -c pccc.cpp -o pccc.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o pccc.so RcppExports.o ccc.o get_codes.o pccc.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [pccc.so] Error 1
+ERROR: compilation failed for package ‘pccc’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/pccc/old/pccc.Rcheck/pccc’
+
+```
+# perturbatr
+
+
+
+* Version: 1.2.1
+* Source code: https://github.com/cran/perturbatr
+* URL: https://github.com/cbg-ethz/perturbatr
+* BugReports: https://github.com/cbg-ethz/perturbatr/issues
+* Date/Publication: 2019-01-04
+* Number of recursive dependencies: 78
+
+Run `revdep_details(,"perturbatr")` for more info
+
+
+
+## Newly broken
+
+* R CMD check timed out
+
+
+# petro.One
+
+
+
+* Version: 0.2.3
+* Source code: https://github.com/cran/petro.One
+* URL: https://github.com/f0nzie/petro.One
+* Date/Publication: 2019-01-13 16:20:03 UTC
+* Number of recursive dependencies: 78
+
+Run `revdep_details(,"petro.One")` for more info
+
+
+
+## In both
+
+* checking whether package ‘petro.One’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/petro.One/new/petro.One.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘petro.One’ ...
+** package ‘petro.One’ successfully unpacked and MD5 sums checked
+** using staged installation
+** R
+** data
+*** moving datasets to lazyload DB
+** inst
+** byte-compile and prepare package for lazy loading
+WARNING: Initial Java 12 release has broken JNI support and does NOT work. Use stable Java 11 (or watch for 12u if avaiable).
+ERROR: Java exception occurred during rJava bootstrap - see stderr for Java stack trace.
+Exception in thread "main" java.lang.NullPointerException
+ at java.base/jdk.internal.reflect.Reflection.verifyMemberAccess(Reflection.java:130)
+ at java.base/java.lang.reflect.AccessibleObject.slowVerifyAccess(AccessibleObject.java:673)
+ at java.base/java.lang.reflect.AccessibleObject.verifyAccess(AccessibleObject.java:666)
+ at java.base/java.lang.reflect.AccessibleObject.checkAccess(AccessibleObject.java:638)
+ at java.base/java.lang.reflect.Field.checkAccess(Field.java:1075)
+ at java.base/java.lang.reflect.Field.get(Field.java:416)
+Error: .onLoad failed in loadNamespace() for 'RWekajars', details:
+ call: .jcheck(silent = FALSE)
+ error: java.lang.NullPointerException.jcall(f, "Ljava/lang/Object;", "get", .jcast(ic, "java/lang/Object"))new("jobjRef", jobj = , jclass = "java/lang/NullPointerException")
+Execution halted
+ERROR: lazy loading failed for package ‘petro.One’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/petro.One/new/petro.One.Rcheck/petro.One’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘petro.One’ ...
+** package ‘petro.One’ successfully unpacked and MD5 sums checked
+** using staged installation
+** R
+** data
+*** moving datasets to lazyload DB
+** inst
+** byte-compile and prepare package for lazy loading
+WARNING: Initial Java 12 release has broken JNI support and does NOT work. Use stable Java 11 (or watch for 12u if avaiable).
+ERROR: Java exception occurred during rJava bootstrap - see stderr for Java stack trace.
+Exception in thread "main" java.lang.NullPointerException
+ at java.base/jdk.internal.reflect.Reflection.verifyMemberAccess(Reflection.java:130)
+ at java.base/java.lang.reflect.AccessibleObject.slowVerifyAccess(AccessibleObject.java:673)
+ at java.base/java.lang.reflect.AccessibleObject.verifyAccess(AccessibleObject.java:666)
+ at java.base/java.lang.reflect.AccessibleObject.checkAccess(AccessibleObject.java:638)
+ at java.base/java.lang.reflect.Field.checkAccess(Field.java:1075)
+ at java.base/java.lang.reflect.Field.get(Field.java:416)
+Error: .onLoad failed in loadNamespace() for 'RWekajars', details:
+ call: .jcheck(silent = FALSE)
+ error: java.lang.NullPointerException.jcall(f, "Ljava/lang/Object;", "get", .jcast(ic, "java/lang/Object"))new("jobjRef", jobj = , jclass = "java/lang/NullPointerException")
+Execution halted
+ERROR: lazy loading failed for package ‘petro.One’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/petro.One/old/petro.One.Rcheck/petro.One’
+
+```
+# phase1PRMD
+
+
+
+* Version: 1.0.1
+* Source code: https://github.com/cran/phase1PRMD
+* Date/Publication: 2019-02-03 17:00:03 UTC
+* Number of recursive dependencies: 75
+
+Run `revdep_details(,"phase1PRMD")` for more info
+
+
+
+## In both
+
+* checking whether package ‘phase1PRMD’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/phase1PRMD/new/phase1PRMD.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘phase1PRMD’ ...
+** package ‘phase1PRMD’ successfully unpacked and MD5 sums checked
+** using staged installation
+** R
+** data
+*** moving datasets to lazyload DB
+** byte-compile and prepare package for lazy loading
+Error: .onLoad failed in loadNamespace() for 'rjags', details:
+ call: dyn.load(file, DLLpath = DLLpath, ...)
+ error: unable to load shared object '/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/phase1PRMD/rjags/libs/rjags.so':
+ dlopen(/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/phase1PRMD/rjags/libs/rjags.so, 10): Library not loaded: /usr/local/lib/libjags.4.dylib
+ Referenced from: /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/phase1PRMD/rjags/libs/rjags.so
+ Reason: image not found
+Execution halted
+ERROR: lazy loading failed for package ‘phase1PRMD’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/phase1PRMD/new/phase1PRMD.Rcheck/phase1PRMD’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘phase1PRMD’ ...
+** package ‘phase1PRMD’ successfully unpacked and MD5 sums checked
+** using staged installation
+** R
+** data
+*** moving datasets to lazyload DB
+** byte-compile and prepare package for lazy loading
+Error: .onLoad failed in loadNamespace() for 'rjags', details:
+ call: dyn.load(file, DLLpath = DLLpath, ...)
+ error: unable to load shared object '/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/phase1PRMD/rjags/libs/rjags.so':
+ dlopen(/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/phase1PRMD/rjags/libs/rjags.so, 10): Library not loaded: /usr/local/lib/libjags.4.dylib
+ Referenced from: /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/phase1PRMD/rjags/libs/rjags.so
+ Reason: image not found
+Execution halted
+ERROR: lazy loading failed for package ‘phase1PRMD’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/phase1PRMD/old/phase1PRMD.Rcheck/phase1PRMD’
+
+```
+# phenofit
+
+
+
+* Version: 0.2.0
+* Source code: https://github.com/cran/phenofit
+* URL: https://github.com/kongdd/phenofit
+* BugReports: https://github.com/kongdd/phenofit/issues
+* Date/Publication: 2019-02-18 11:50:04 UTC
+* Number of recursive dependencies: 72
+
+Run `revdep_details(,"phenofit")` for more info
+
+
+
+## In both
+
+* checking whether package ‘phenofit’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/phenofit/new/phenofit.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘phenofit’ ...
+** package ‘phenofit’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/phenofit/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/phenofit/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp -fPIC -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o
+clang: error: unsupported option '-fopenmp'
+make: *** [RcppExports.o] Error 1
+ERROR: compilation failed for package ‘phenofit’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/phenofit/new/phenofit.Rcheck/phenofit’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘phenofit’ ...
+** package ‘phenofit’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/phenofit/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/phenofit/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp -fPIC -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o
+clang: error: unsupported option '-fopenmp'
+make: *** [RcppExports.o] Error 1
+ERROR: compilation failed for package ‘phenofit’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/phenofit/old/phenofit.Rcheck/phenofit’
+
+```
+# poppr
+
+
+
+* Version: 2.8.2
+* Source code: https://github.com/cran/poppr
+* URL: https://github.com/grunwaldlab/poppr, https://grunwaldlab.github.io/poppr, https://grunwaldlab.github.io/Population_Genetics_in_R/
+* BugReports: https://github.com/grunwaldlab/poppr/issues
+* Date/Publication: 2019-03-11 10:30:03 UTC
+* Number of recursive dependencies: 94
+
+Run `revdep_details(,"poppr")` for more info
+
+
+
+## In both
+
+* checking whether package ‘poppr’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/poppr/new/poppr.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘poppr’ ...
+** package ‘poppr’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp -fPIC -Wall -g -O2 -c adjust_missing.c -o adjust_missing.o
+clang: error: unsupported option '-fopenmp'
+make: *** [adjust_missing.o] Error 1
+ERROR: compilation failed for package ‘poppr’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/poppr/new/poppr.Rcheck/poppr’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘poppr’ ...
+** package ‘poppr’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp -fPIC -Wall -g -O2 -c adjust_missing.c -o adjust_missing.o
+clang: error: unsupported option '-fopenmp'
+make: *** [adjust_missing.o] Error 1
+ERROR: compilation failed for package ‘poppr’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/poppr/old/poppr.Rcheck/poppr’
+
+```
+# PPforest
+
+
+
+* Version: 0.1.1
+* Source code: https://github.com/cran/PPforest
+* URL: https://github.com/natydasilva/PPforest
+* Date/Publication: 2018-06-11 18:46:17 UTC
+* Number of recursive dependencies: 83
+
+Run `revdep_details(,"PPforest")` for more info
+
+
+
+## In both
+
+* checking whether package ‘PPforest’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/PPforest/new/PPforest.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘PPforest’ ...
+** package ‘PPforest’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/PPforest/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/PPforest/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c RcppExports.cpp -o RcppExports.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/PPforest/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/PPforest/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c optim_index.cpp -o optim_index.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o PPforest.so RcppExports.o optim_index.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [PPforest.so] Error 1
+ERROR: compilation failed for package ‘PPforest’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/PPforest/new/PPforest.Rcheck/PPforest’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘PPforest’ ...
+** package ‘PPforest’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/PPforest/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/PPforest/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c RcppExports.cpp -o RcppExports.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/PPforest/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/PPforest/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c optim_index.cpp -o optim_index.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o PPforest.so RcppExports.o optim_index.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [PPforest.so] Error 1
+ERROR: compilation failed for package ‘PPforest’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/PPforest/old/PPforest.Rcheck/PPforest’
+
+```
+# pRoloc
+
+
+
+* Version: 1.22.2
+* Source code: https://github.com/cran/pRoloc
+* URL: https://github.com/lgatto/pRoloc
+* BugReports: https://github.com/lgatto/pRoloc/issues
+* Date/Publication: 2019-03-16
+* Number of recursive dependencies: 204
+
+Run `revdep_details(,"pRoloc")` for more info
+
+
+
+## In both
+
+* checking whether package ‘pRoloc’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/pRoloc/new/pRoloc.Rcheck/00install.out’ for details.
+ ```
+
+* checking package dependencies ... NOTE
+ ```
+ Packages suggested but not available for checking: 'pRolocdata', 'GO.db'
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘pRoloc’ ...
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/pRoloc/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/pRoloc/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c RcppExports.cpp -o RcppExports.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/pRoloc/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/pRoloc/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c dmvtCpp.cpp -o dmvtCpp.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/pRoloc/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/pRoloc/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c pRoloc.cpp -o pRoloc.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o pRoloc.so RcppExports.o dmvtCpp.o pRoloc.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [pRoloc.so] Error 1
+ERROR: compilation failed for package ‘pRoloc’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/pRoloc/new/pRoloc.Rcheck/pRoloc’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘pRoloc’ ...
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/pRoloc/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/pRoloc/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c RcppExports.cpp -o RcppExports.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/pRoloc/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/pRoloc/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c dmvtCpp.cpp -o dmvtCpp.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/pRoloc/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/pRoloc/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c pRoloc.cpp -o pRoloc.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o pRoloc.so RcppExports.o dmvtCpp.o pRoloc.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [pRoloc.so] Error 1
+ERROR: compilation failed for package ‘pRoloc’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/pRoloc/old/pRoloc.Rcheck/pRoloc’
+
+```
+# qdap
+
+
+
+* Version: 2.3.2
+* Source code: https://github.com/cran/qdap
+* URL: http://trinker.github.com/qdap/
+* BugReports: http://github.com/trinker/qdap/issues
+* Date/Publication: 2019-01-02 13:40:07 UTC
+* Number of recursive dependencies: 86
+
+Run `revdep_details(,"qdap")` for more info
+
+
+
+## In both
+
+* checking whether package ‘qdap’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/qdap/new/qdap.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘qdap’ ...
+** package ‘qdap’ successfully unpacked and MD5 sums checked
+** using staged installation
+** R
+** data
+*** moving datasets to lazyload DB
+** inst
+** byte-compile and prepare package for lazy loading
+WARNING: Initial Java 12 release has broken JNI support and does NOT work. Use stable Java 11 (or watch for 12u if avaiable).
+ERROR: Java exception occurred during rJava bootstrap - see stderr for Java stack trace.
+Exception in thread "main" java.lang.NullPointerException
+ at java.base/jdk.internal.reflect.Reflection.verifyMemberAccess(Reflection.java:130)
+ at java.base/java.lang.reflect.AccessibleObject.slowVerifyAccess(AccessibleObject.java:673)
+ at java.base/java.lang.reflect.AccessibleObject.verifyAccess(AccessibleObject.java:666)
+ at java.base/java.lang.reflect.AccessibleObject.checkAccess(AccessibleObject.java:638)
+ at java.base/java.lang.reflect.Field.checkAccess(Field.java:1075)
+ at java.base/java.lang.reflect.Field.get(Field.java:416)
+Error: .onLoad failed in loadNamespace() for 'openNLPdata', details:
+ call: .jcheck(silent = FALSE)
+ error: java.lang.NullPointerException.jcall(f, "Ljava/lang/Object;", "get", .jcast(ic, "java/lang/Object"))new("jobjRef", jobj = , jclass = "java/lang/NullPointerException")
+Execution halted
+ERROR: lazy loading failed for package ‘qdap’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/qdap/new/qdap.Rcheck/qdap’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘qdap’ ...
+** package ‘qdap’ successfully unpacked and MD5 sums checked
+** using staged installation
+** R
+** data
+*** moving datasets to lazyload DB
+** inst
+** byte-compile and prepare package for lazy loading
+WARNING: Initial Java 12 release has broken JNI support and does NOT work. Use stable Java 11 (or watch for 12u if avaiable).
+ERROR: Java exception occurred during rJava bootstrap - see stderr for Java stack trace.
+Exception in thread "main" java.lang.NullPointerException
+ at java.base/jdk.internal.reflect.Reflection.verifyMemberAccess(Reflection.java:130)
+ at java.base/java.lang.reflect.AccessibleObject.slowVerifyAccess(AccessibleObject.java:673)
+ at java.base/java.lang.reflect.AccessibleObject.verifyAccess(AccessibleObject.java:666)
+ at java.base/java.lang.reflect.AccessibleObject.checkAccess(AccessibleObject.java:638)
+ at java.base/java.lang.reflect.Field.checkAccess(Field.java:1075)
+ at java.base/java.lang.reflect.Field.get(Field.java:416)
+Error: .onLoad failed in loadNamespace() for 'openNLPdata', details:
+ call: .jcheck(silent = FALSE)
+ error: java.lang.NullPointerException.jcall(f, "Ljava/lang/Object;", "get", .jcast(ic, "java/lang/Object"))new("jobjRef", jobj = , jclass = "java/lang/NullPointerException")
+Execution halted
+ERROR: lazy loading failed for package ‘qdap’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/qdap/old/qdap.Rcheck/qdap’
+
+```
+# quanteda
+
+
+
+* Version: 1.4.3
+* Source code: https://github.com/cran/quanteda
+* URL: https://quanteda.io
+* BugReports: https://github.com/quanteda/quanteda/issues
+* Date/Publication: 2019-04-01 19:00:02 UTC
+* Number of recursive dependencies: 125
+
+Run `revdep_details(,"quanteda")` for more info
+
+
+
+## In both
+
+* checking whether package ‘quanteda’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/quanteda/new/quanteda.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘quanteda’ ...
+** package ‘quanteda’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DARMA_DONT_PRINT_OPENMP_WARNING -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppParallel/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -DARMA_64BIT_WORD=1 -fPIC -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DARMA_DONT_PRINT_OPENMP_WARNING -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppParallel/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -DARMA_64BIT_WORD=1 -fPIC -Wall -g -O2 -c ca_mt.cpp -o ca_mt.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DARMA_DONT_PRINT_OPENMP_WARNING -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppParallel/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -DARMA_64BIT_WORD=1 -fPIC -Wall -g -O2 -c collocations_mt_.cpp -o collocations_mt_.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DARMA_DONT_PRINT_OPENMP_WARNING -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppParallel/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -DARMA_64BIT_WORD=1 -fPIC -Wall -g -O2 -c dist_mt.cpp -o dist_mt.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DARMA_DONT_PRINT_OPENMP_WARNING -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppParallel/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -DARMA_64BIT_WORD=1 -fPIC -Wall -g -O2 -c fcm_mt.cpp -o fcm_mt.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DARMA_DONT_PRINT_OPENMP_WARNING -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppParallel/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -DARMA_64BIT_WORD=1 -fPIC -Wall -g -O2 -c kwic_mt.cpp -o kwic_mt.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DARMA_DONT_PRINT_OPENMP_WARNING -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppParallel/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -DARMA_64BIT_WORD=1 -fPIC -Wall -g -O2 -c simil_mt.cpp -o simil_mt.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DARMA_DONT_PRINT_OPENMP_WARNING -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppParallel/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -DARMA_64BIT_WORD=1 -fPIC -Wall -g -O2 -c tokens_chunk_mt.cpp -o tokens_chunk_mt.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DARMA_DONT_PRINT_OPENMP_WARNING -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppParallel/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -DARMA_64BIT_WORD=1 -fPIC -Wall -g -O2 -c tokens_compound_mt.cpp -o tokens_compound_mt.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DARMA_DONT_PRINT_OPENMP_WARNING -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppParallel/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -DARMA_64BIT_WORD=1 -fPIC -Wall -g -O2 -c tokens_lookup_mt.cpp -o tokens_lookup_mt.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DARMA_DONT_PRINT_OPENMP_WARNING -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppParallel/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -DARMA_64BIT_WORD=1 -fPIC -Wall -g -O2 -c tokens_ngrams_mt.cpp -o tokens_ngrams_mt.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DARMA_DONT_PRINT_OPENMP_WARNING -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppParallel/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -DARMA_64BIT_WORD=1 -fPIC -Wall -g -O2 -c tokens_recompile_mt.cpp -o tokens_recompile_mt.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DARMA_DONT_PRINT_OPENMP_WARNING -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppParallel/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -DARMA_64BIT_WORD=1 -fPIC -Wall -g -O2 -c tokens_replace_mt.cpp -o tokens_replace_mt.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DARMA_DONT_PRINT_OPENMP_WARNING -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppParallel/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -DARMA_64BIT_WORD=1 -fPIC -Wall -g -O2 -c tokens_segment_mt.cpp -o tokens_segment_mt.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DARMA_DONT_PRINT_OPENMP_WARNING -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppParallel/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -DARMA_64BIT_WORD=1 -fPIC -Wall -g -O2 -c tokens_select_mt.cpp -o tokens_select_mt.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DARMA_DONT_PRINT_OPENMP_WARNING -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppParallel/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -DARMA_64BIT_WORD=1 -fPIC -Wall -g -O2 -c utility.cpp -o utility.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DARMA_DONT_PRINT_OPENMP_WARNING -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppParallel/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -DARMA_64BIT_WORD=1 -fPIC -Wall -g -O2 -c wordcloud.cpp -o wordcloud.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DARMA_DONT_PRINT_OPENMP_WARNING -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppParallel/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -DARMA_64BIT_WORD=1 -fPIC -Wall -g -O2 -c wordfish_dense.cpp -o wordfish_dense.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DARMA_DONT_PRINT_OPENMP_WARNING -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppParallel/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -DARMA_64BIT_WORD=1 -fPIC -Wall -g -O2 -c wordfish_mt.cpp -o wordfish_mt.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o quanteda.so RcppExports.o ca_mt.o collocations_mt_.o dist_mt.o fcm_mt.o kwic_mt.o simil_mt.o tokens_chunk_mt.o tokens_compound_mt.o tokens_lookup_mt.o tokens_ngrams_mt.o tokens_recompile_mt.o tokens_replace_mt.o tokens_segment_mt.o tokens_select_mt.o utility.o wordcloud.o wordfish_dense.o wordfish_mt.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [quanteda.so] Error 1
+ERROR: compilation failed for package ‘quanteda’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/quanteda/new/quanteda.Rcheck/quanteda’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘quanteda’ ...
+** package ‘quanteda’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DARMA_DONT_PRINT_OPENMP_WARNING -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppParallel/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -DARMA_64BIT_WORD=1 -fPIC -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DARMA_DONT_PRINT_OPENMP_WARNING -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppParallel/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -DARMA_64BIT_WORD=1 -fPIC -Wall -g -O2 -c ca_mt.cpp -o ca_mt.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DARMA_DONT_PRINT_OPENMP_WARNING -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppParallel/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -DARMA_64BIT_WORD=1 -fPIC -Wall -g -O2 -c collocations_mt_.cpp -o collocations_mt_.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DARMA_DONT_PRINT_OPENMP_WARNING -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppParallel/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -DARMA_64BIT_WORD=1 -fPIC -Wall -g -O2 -c dist_mt.cpp -o dist_mt.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DARMA_DONT_PRINT_OPENMP_WARNING -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppParallel/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -DARMA_64BIT_WORD=1 -fPIC -Wall -g -O2 -c fcm_mt.cpp -o fcm_mt.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DARMA_DONT_PRINT_OPENMP_WARNING -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppParallel/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -DARMA_64BIT_WORD=1 -fPIC -Wall -g -O2 -c kwic_mt.cpp -o kwic_mt.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DARMA_DONT_PRINT_OPENMP_WARNING -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppParallel/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -DARMA_64BIT_WORD=1 -fPIC -Wall -g -O2 -c simil_mt.cpp -o simil_mt.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DARMA_DONT_PRINT_OPENMP_WARNING -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppParallel/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -DARMA_64BIT_WORD=1 -fPIC -Wall -g -O2 -c tokens_chunk_mt.cpp -o tokens_chunk_mt.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DARMA_DONT_PRINT_OPENMP_WARNING -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppParallel/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -DARMA_64BIT_WORD=1 -fPIC -Wall -g -O2 -c tokens_compound_mt.cpp -o tokens_compound_mt.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DARMA_DONT_PRINT_OPENMP_WARNING -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppParallel/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -DARMA_64BIT_WORD=1 -fPIC -Wall -g -O2 -c tokens_lookup_mt.cpp -o tokens_lookup_mt.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DARMA_DONT_PRINT_OPENMP_WARNING -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppParallel/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -DARMA_64BIT_WORD=1 -fPIC -Wall -g -O2 -c tokens_ngrams_mt.cpp -o tokens_ngrams_mt.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DARMA_DONT_PRINT_OPENMP_WARNING -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppParallel/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -DARMA_64BIT_WORD=1 -fPIC -Wall -g -O2 -c tokens_recompile_mt.cpp -o tokens_recompile_mt.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DARMA_DONT_PRINT_OPENMP_WARNING -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppParallel/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -DARMA_64BIT_WORD=1 -fPIC -Wall -g -O2 -c tokens_replace_mt.cpp -o tokens_replace_mt.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DARMA_DONT_PRINT_OPENMP_WARNING -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppParallel/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -DARMA_64BIT_WORD=1 -fPIC -Wall -g -O2 -c tokens_segment_mt.cpp -o tokens_segment_mt.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DARMA_DONT_PRINT_OPENMP_WARNING -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppParallel/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -DARMA_64BIT_WORD=1 -fPIC -Wall -g -O2 -c tokens_select_mt.cpp -o tokens_select_mt.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DARMA_DONT_PRINT_OPENMP_WARNING -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppParallel/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -DARMA_64BIT_WORD=1 -fPIC -Wall -g -O2 -c utility.cpp -o utility.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DARMA_DONT_PRINT_OPENMP_WARNING -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppParallel/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -DARMA_64BIT_WORD=1 -fPIC -Wall -g -O2 -c wordcloud.cpp -o wordcloud.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DARMA_DONT_PRINT_OPENMP_WARNING -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppParallel/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -DARMA_64BIT_WORD=1 -fPIC -Wall -g -O2 -c wordfish_dense.cpp -o wordfish_dense.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -DARMA_DONT_PRINT_OPENMP_WARNING -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppParallel/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/quanteda/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -DARMA_64BIT_WORD=1 -fPIC -Wall -g -O2 -c wordfish_mt.cpp -o wordfish_mt.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o quanteda.so RcppExports.o ca_mt.o collocations_mt_.o dist_mt.o fcm_mt.o kwic_mt.o simil_mt.o tokens_chunk_mt.o tokens_compound_mt.o tokens_lookup_mt.o tokens_ngrams_mt.o tokens_recompile_mt.o tokens_replace_mt.o tokens_segment_mt.o tokens_select_mt.o utility.o wordcloud.o wordfish_dense.o wordfish_mt.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [quanteda.so] Error 1
+ERROR: compilation failed for package ‘quanteda’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/quanteda/old/quanteda.Rcheck/quanteda’
+
+```
+# quokar
+
+
+
+* Version: 0.1.0
+* Source code: https://github.com/cran/quokar
+* URL: https://github.com/wenjingwang/quokar
+* BugReports: https://github.com/wenjingwang/quokar/issues
+* Date/Publication: 2017-11-10 10:21:36 UTC
+* Number of recursive dependencies: 70
+
+Run `revdep_details(,"quokar")` for more info
+
+
+
+## In both
+
+* checking whether package ‘quokar’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/quokar/new/quokar.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘quokar’ ...
+** package ‘quokar’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c init.c -o init.o
+gfortran -fPIC -Wall -g -O2 -c rqbr.f -o rqbr.o
+rqbr.f:567:5:
+
+ 23243 continue
+ 1
+Warning: Label 23243 at (1) defined but not used [-Wunused-label]
+rqbr.f:527:5:
+
+ 23231 continue
+ 1
+Warning: Label 23231 at (1) defined but not used [-Wunused-label]
+rqbr.f:514:5:
+
+ 23227 continue
+ 1
+Warning: Label 23227 at (1) defined but not used [-Wunused-label]
+rqbr.f:517:5:
+
+ 23223 continue
+ 1
+Warning: Label 23223 at (1) defined but not used [-Wunused-label]
+rqbr.f:506:5:
+
+ 23221 continue
+ 1
+Warning: Label 23221 at (1) defined but not used [-Wunused-label]
+rqbr.f:481:5:
+
+ 23205 continue
+ 1
+Warning: Label 23205 at (1) defined but not used [-Wunused-label]
+rqbr.f:462:5:
+
+ 23203 continue
+ 1
+Warning: Label 23203 at (1) defined but not used [-Wunused-label]
+rqbr.f:458:5:
+
+ 23201 continue
+ 1
+Warning: Label 23201 at (1) defined but not used [-Wunused-label]
+rqbr.f:432:5:
+
+ 23193 continue
+ 1
+Warning: Label 23193 at (1) defined but not used [-Wunused-label]
+rqbr.f:425:5:
+
+ 23191 continue
+ 1
+Warning: Label 23191 at (1) defined but not used [-Wunused-label]
+rqbr.f:375:5:
+
+ 23171 continue
+ 1
+Warning: Label 23171 at (1) defined but not used [-Wunused-label]
+rqbr.f:393:5:
+
+ 23169 continue
+ 1
+Warning: Label 23169 at (1) defined but not used [-Wunused-label]
+rqbr.f:361:5:
+
+ 23167 continue
+ 1
+Warning: Label 23167 at (1) defined but not used [-Wunused-label]
+rqbr.f:348:5:
+
+ 23161 continue
+ 1
+Warning: Label 23161 at (1) defined but not used [-Wunused-label]
+rqbr.f:341:5:
+
+ 23157 continue
+ 1
+Warning: Label 23157 at (1) defined but not used [-Wunused-label]
+rqbr.f:336:5:
+
+ 23155 continue
+ 1
+Warning: Label 23155 at (1) defined but not used [-Wunused-label]
+rqbr.f:327:5:
+
+ 23147 continue
+ 1
+Warning: Label 23147 at (1) defined but not used [-Wunused-label]
+rqbr.f:317:5:
+
+ 23141 continue
+ 1
+Warning: Label 23141 at (1) defined but not used [-Wunused-label]
+rqbr.f:303:5:
+
+ 23139 continue
+ 1
+Warning: Label 23139 at (1) defined but not used [-Wunused-label]
+rqbr.f:294:5:
+
+ 23133 continue
+ 1
+Warning: Label 23133 at (1) defined but not used [-Wunused-label]
+rqbr.f:277:5:
+
+ 23129 continue
+ 1
+Warning: Label 23129 at (1) defined but not used [-Wunused-label]
+rqbr.f:272:5:
+
+ 23121 continue
+ 1
+Warning: Label 23121 at (1) defined but not used [-Wunused-label]
+rqbr.f:258:5:
+
+ 23117 continue
+ 1
+Warning: Label 23117 at (1) defined but not used [-Wunused-label]
+rqbr.f:243:5:
+
+ 23111 continue
+ 1
+Warning: Label 23111 at (1) defined but not used [-Wunused-label]
+rqbr.f:234:5:
+
+ 23107 continue
+ 1
+Warning: Label 23107 at (1) defined but not used [-Wunused-label]
+rqbr.f:237:5:
+
+ 23103 continue
+ 1
+Warning: Label 23103 at (1) defined but not used [-Wunused-label]
+rqbr.f:225:5:
+
+ 23099 continue
+ 1
+Warning: Label 23099 at (1) defined but not used [-Wunused-label]
+rqbr.f:217:5:
+
+ 23097 continue
+ 1
+Warning: Label 23097 at (1) defined but not used [-Wunused-label]
+rqbr.f:208:5:
+
+ 23095 continue
+ 1
+Warning: Label 23095 at (1) defined but not used [-Wunused-label]
+rqbr.f:187:5:
+
+ 23085 continue
+ 1
+Warning: Label 23085 at (1) defined but not used [-Wunused-label]
+rqbr.f:210:5:
+
+ 23080 goto 23079
+ 1
+Warning: Label 23080 at (1) defined but not used [-Wunused-label]
+rqbr.f:174:5:
+
+ 23076 continue
+ 1
+Warning: Label 23076 at (1) defined but not used [-Wunused-label]
+rqbr.f:279:5:
+
+ 23073 goto 23072
+ 1
+Warning: Label 23073 at (1) defined but not used [-Wunused-label]
+rqbr.f:159:5:
+
+ 23071 continue
+ 1
+Warning: Label 23071 at (1) defined but not used [-Wunused-label]
+rqbr.f:151:5:
+
+ 23059 continue
+ 1
+Warning: Label 23059 at (1) defined but not used [-Wunused-label]
+rqbr.f:281:5:
+
+ 23056 goto 23055
+ 1
+Warning: Label 23056 at (1) defined but not used [-Wunused-label]
+rqbr.f:283:5:
+
+ 23053 goto 23052
+ 1
+Warning: Label 23053 at (1) defined but not used [-Wunused-label]
+rqbr.f:127:5:
+
+ 23049 continue
+ 1
+Warning: Label 23049 at (1) defined but not used [-Wunused-label]
+rqbr.f:491:5:
+
+ 23046 goto 23045
+ 1
+Warning: Label 23046 at (1) defined but not used [-Wunused-label]
+rqbr.f:116:5:
+
+ 23044 continue
+ 1
+Warning: Label 23044 at (1) defined but not used [-Wunused-label]
+rqbr.f:119:5:
+
+ 23042 continue
+ 1
+Warning: Label 23042 at (1) defined but not used [-Wunused-label]
+rqbr.f:104:5:
+
+ 23038 continue
+ 1
+Warning: Label 23038 at (1) defined but not used [-Wunused-label]
+rqbr.f:107:5:
+
+ 23036 continue
+ 1
+Warning: Label 23036 at (1) defined but not used [-Wunused-label]
+rqbr.f:91:5:
+
+ 23034 continue
+ 1
+Warning: Label 23034 at (1) defined but not used [-Wunused-label]
+rqbr.f:78:5:
+
+ 23022 continue
+ 1
+Warning: Label 23022 at (1) defined but not used [-Wunused-label]
+rqbr.f:94:5:
+
+ 23020 continue
+ 1
+Warning: Label 23020 at (1) defined but not used [-Wunused-label]
+rqbr.f:562:5:
+
+ 23017 goto 23016
+ 1
+Warning: Label 23017 at (1) defined but not used [-Wunused-label]
+rqbr.f:54:5:
+
+ 23013 continue
+ 1
+Warning: Label 23013 at (1) defined but not used [-Wunused-label]
+rqbr.f:50:5:
+
+ 23011 continue
+ 1
+Warning: Label 23011 at (1) defined but not used [-Wunused-label]
+rqbr.f:300:10:
+
+ k = wa(i,n4)*sign(one,wa(i,n4))
+ 1
+Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]
+rqbr.f:306:11:
+
+ kd = abs(wa(m4,i))-n
+ 1
+Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]
+rqbr.f:319:11:
+
+ kd = abs(wa(i,n4))-n
+ 1
+Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]
+rqbr.f:357:10:
+
+ k = wa(i,n4)*sign(one,wa(i,n4))
+ 1
+Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]
+rqbr.f:365:10:
+
+ k = wa(i,n4)*sign(one,wa(i,n4))-n
+ 1
+Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]
+rqbr.f:521:10:
+
+ k = wa(i,n4)*sign(one,wa(i,n4))
+ 1
+Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]
+rqbr.f:5:0:
+
+ integer n,n1,n2,n3,nsol,ndsol,out,s(m),h(nn,nsol)
+
+Warning: 'out' may be used uninitialized in this function [-Wmaybe-uninitialized]
+rqbr.f:273:0:
+
+ if(wa(m1,in).lt.zero)then
+
+Warning: 'in' may be used uninitialized in this function [-Wmaybe-uninitialized]
+rqbr.f:483:0:
+
+ if(tnt.ge.t1+toler)then
+
+Warning: 't1' may be used uninitialized in this function [-Wmaybe-uninitialized]
+gfortran -fPIC -Wall -g -O2 -c rqfnb.f -o rqfnb.o
+rqfnb.f:134:5:
+
+ 23029 continue
+ 1
+Warning: Label 23029 at (1) defined but not used [-Wunused-label]
+rqfnb.f:107:5:
+
+ 23027 continue
+ 1
+Warning: Label 23027 at (1) defined but not used [-Wunused-label]
+rqfnb.f:94:5:
+
+ 23015 continue
+ 1
+Warning: Label 23015 at (1) defined but not used [-Wunused-label]
+rqfnb.f:64:5:
+
+ 23011 continue
+ 1
+Warning: Label 23011 at (1) defined but not used [-Wunused-label]
+rqfnb.f:149:5:
+
+ 23009 continue
+ 1
+Warning: Label 23009 at (1) defined but not used [-Wunused-label]
+rqfnb.f:53:5:
+
+ 23005 continue
+ 1
+Warning: Label 23005 at (1) defined but not used [-Wunused-label]
+rqfnb.f:36:5:
+
+ 23001 continue
+ 1
+Warning: Label 23001 at (1) defined but not used [-Wunused-label]
+rqfnb.f:169:5:
+
+ 23043 continue
+ 1
+Warning: Label 23043 at (1) defined but not used [-Wunused-label]
+rqfnb.f:163:5:
+
+ 23041 continue
+ 1
+Warning: Label 23041 at (1) defined but not used [-Wunused-label]
+rqfnb.f:165:5:
+
+ 23039 continue
+ 1
+Warning: Label 23039 at (1) defined but not used [-Wunused-label]
+clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o quokar.so init.o rqbr.o rqfnb.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [quokar.so] Error 1
+ERROR: compilation failed for package ‘quokar’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/quokar/new/quokar.Rcheck/quokar’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘quokar’ ...
+** package ‘quokar’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c init.c -o init.o
+gfortran -fPIC -Wall -g -O2 -c rqbr.f -o rqbr.o
+rqbr.f:567:5:
+
+ 23243 continue
+ 1
+Warning: Label 23243 at (1) defined but not used [-Wunused-label]
+rqbr.f:527:5:
+
+ 23231 continue
+ 1
+Warning: Label 23231 at (1) defined but not used [-Wunused-label]
+rqbr.f:514:5:
+
+ 23227 continue
+ 1
+Warning: Label 23227 at (1) defined but not used [-Wunused-label]
+rqbr.f:517:5:
+
+ 23223 continue
+ 1
+Warning: Label 23223 at (1) defined but not used [-Wunused-label]
+rqbr.f:506:5:
+
+ 23221 continue
+ 1
+Warning: Label 23221 at (1) defined but not used [-Wunused-label]
+rqbr.f:481:5:
+
+ 23205 continue
+ 1
+Warning: Label 23205 at (1) defined but not used [-Wunused-label]
+rqbr.f:462:5:
+
+ 23203 continue
+ 1
+Warning: Label 23203 at (1) defined but not used [-Wunused-label]
+rqbr.f:458:5:
+
+ 23201 continue
+ 1
+Warning: Label 23201 at (1) defined but not used [-Wunused-label]
+rqbr.f:432:5:
+
+ 23193 continue
+ 1
+Warning: Label 23193 at (1) defined but not used [-Wunused-label]
+rqbr.f:425:5:
+
+ 23191 continue
+ 1
+Warning: Label 23191 at (1) defined but not used [-Wunused-label]
+rqbr.f:375:5:
+
+ 23171 continue
+ 1
+Warning: Label 23171 at (1) defined but not used [-Wunused-label]
+rqbr.f:393:5:
+
+ 23169 continue
+ 1
+Warning: Label 23169 at (1) defined but not used [-Wunused-label]
+rqbr.f:361:5:
+
+ 23167 continue
+ 1
+Warning: Label 23167 at (1) defined but not used [-Wunused-label]
+rqbr.f:348:5:
+
+ 23161 continue
+ 1
+Warning: Label 23161 at (1) defined but not used [-Wunused-label]
+rqbr.f:341:5:
+
+ 23157 continue
+ 1
+Warning: Label 23157 at (1) defined but not used [-Wunused-label]
+rqbr.f:336:5:
+
+ 23155 continue
+ 1
+Warning: Label 23155 at (1) defined but not used [-Wunused-label]
+rqbr.f:327:5:
+
+ 23147 continue
+ 1
+Warning: Label 23147 at (1) defined but not used [-Wunused-label]
+rqbr.f:317:5:
+
+ 23141 continue
+ 1
+Warning: Label 23141 at (1) defined but not used [-Wunused-label]
+rqbr.f:303:5:
+
+ 23139 continue
+ 1
+Warning: Label 23139 at (1) defined but not used [-Wunused-label]
+rqbr.f:294:5:
+
+ 23133 continue
+ 1
+Warning: Label 23133 at (1) defined but not used [-Wunused-label]
+rqbr.f:277:5:
+
+ 23129 continue
+ 1
+Warning: Label 23129 at (1) defined but not used [-Wunused-label]
+rqbr.f:272:5:
+
+ 23121 continue
+ 1
+Warning: Label 23121 at (1) defined but not used [-Wunused-label]
+rqbr.f:258:5:
+
+ 23117 continue
+ 1
+Warning: Label 23117 at (1) defined but not used [-Wunused-label]
+rqbr.f:243:5:
+
+ 23111 continue
+ 1
+Warning: Label 23111 at (1) defined but not used [-Wunused-label]
+rqbr.f:234:5:
+
+ 23107 continue
+ 1
+Warning: Label 23107 at (1) defined but not used [-Wunused-label]
+rqbr.f:237:5:
+
+ 23103 continue
+ 1
+Warning: Label 23103 at (1) defined but not used [-Wunused-label]
+rqbr.f:225:5:
+
+ 23099 continue
+ 1
+Warning: Label 23099 at (1) defined but not used [-Wunused-label]
+rqbr.f:217:5:
+
+ 23097 continue
+ 1
+Warning: Label 23097 at (1) defined but not used [-Wunused-label]
+rqbr.f:208:5:
+
+ 23095 continue
+ 1
+Warning: Label 23095 at (1) defined but not used [-Wunused-label]
+rqbr.f:187:5:
+
+ 23085 continue
+ 1
+Warning: Label 23085 at (1) defined but not used [-Wunused-label]
+rqbr.f:210:5:
+
+ 23080 goto 23079
+ 1
+Warning: Label 23080 at (1) defined but not used [-Wunused-label]
+rqbr.f:174:5:
+
+ 23076 continue
+ 1
+Warning: Label 23076 at (1) defined but not used [-Wunused-label]
+rqbr.f:279:5:
+
+ 23073 goto 23072
+ 1
+Warning: Label 23073 at (1) defined but not used [-Wunused-label]
+rqbr.f:159:5:
+
+ 23071 continue
+ 1
+Warning: Label 23071 at (1) defined but not used [-Wunused-label]
+rqbr.f:151:5:
+
+ 23059 continue
+ 1
+Warning: Label 23059 at (1) defined but not used [-Wunused-label]
+rqbr.f:281:5:
+
+ 23056 goto 23055
+ 1
+Warning: Label 23056 at (1) defined but not used [-Wunused-label]
+rqbr.f:283:5:
+
+ 23053 goto 23052
+ 1
+Warning: Label 23053 at (1) defined but not used [-Wunused-label]
+rqbr.f:127:5:
+
+ 23049 continue
+ 1
+Warning: Label 23049 at (1) defined but not used [-Wunused-label]
+rqbr.f:491:5:
+
+ 23046 goto 23045
+ 1
+Warning: Label 23046 at (1) defined but not used [-Wunused-label]
+rqbr.f:116:5:
+
+ 23044 continue
+ 1
+Warning: Label 23044 at (1) defined but not used [-Wunused-label]
+rqbr.f:119:5:
+
+ 23042 continue
+ 1
+Warning: Label 23042 at (1) defined but not used [-Wunused-label]
+rqbr.f:104:5:
+
+ 23038 continue
+ 1
+Warning: Label 23038 at (1) defined but not used [-Wunused-label]
+rqbr.f:107:5:
+
+ 23036 continue
+ 1
+Warning: Label 23036 at (1) defined but not used [-Wunused-label]
+rqbr.f:91:5:
+
+ 23034 continue
+ 1
+Warning: Label 23034 at (1) defined but not used [-Wunused-label]
+rqbr.f:78:5:
+
+ 23022 continue
+ 1
+Warning: Label 23022 at (1) defined but not used [-Wunused-label]
+rqbr.f:94:5:
+
+ 23020 continue
+ 1
+Warning: Label 23020 at (1) defined but not used [-Wunused-label]
+rqbr.f:562:5:
+
+ 23017 goto 23016
+ 1
+Warning: Label 23017 at (1) defined but not used [-Wunused-label]
+rqbr.f:54:5:
+
+ 23013 continue
+ 1
+Warning: Label 23013 at (1) defined but not used [-Wunused-label]
+rqbr.f:50:5:
+
+ 23011 continue
+ 1
+Warning: Label 23011 at (1) defined but not used [-Wunused-label]
+rqbr.f:300:10:
+
+ k = wa(i,n4)*sign(one,wa(i,n4))
+ 1
+Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]
+rqbr.f:306:11:
+
+ kd = abs(wa(m4,i))-n
+ 1
+Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]
+rqbr.f:319:11:
+
+ kd = abs(wa(i,n4))-n
+ 1
+Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]
+rqbr.f:357:10:
+
+ k = wa(i,n4)*sign(one,wa(i,n4))
+ 1
+Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]
+rqbr.f:365:10:
+
+ k = wa(i,n4)*sign(one,wa(i,n4))-n
+ 1
+Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]
+rqbr.f:521:10:
+
+ k = wa(i,n4)*sign(one,wa(i,n4))
+ 1
+Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1) [-Wconversion]
+rqbr.f:5:0:
+
+ integer n,n1,n2,n3,nsol,ndsol,out,s(m),h(nn,nsol)
+
+Warning: 'out' may be used uninitialized in this function [-Wmaybe-uninitialized]
+rqbr.f:273:0:
+
+ if(wa(m1,in).lt.zero)then
+
+Warning: 'in' may be used uninitialized in this function [-Wmaybe-uninitialized]
+rqbr.f:483:0:
+
+ if(tnt.ge.t1+toler)then
+
+Warning: 't1' may be used uninitialized in this function [-Wmaybe-uninitialized]
+gfortran -fPIC -Wall -g -O2 -c rqfnb.f -o rqfnb.o
+rqfnb.f:134:5:
+
+ 23029 continue
+ 1
+Warning: Label 23029 at (1) defined but not used [-Wunused-label]
+rqfnb.f:107:5:
+
+ 23027 continue
+ 1
+Warning: Label 23027 at (1) defined but not used [-Wunused-label]
+rqfnb.f:94:5:
+
+ 23015 continue
+ 1
+Warning: Label 23015 at (1) defined but not used [-Wunused-label]
+rqfnb.f:64:5:
+
+ 23011 continue
+ 1
+Warning: Label 23011 at (1) defined but not used [-Wunused-label]
+rqfnb.f:149:5:
+
+ 23009 continue
+ 1
+Warning: Label 23009 at (1) defined but not used [-Wunused-label]
+rqfnb.f:53:5:
+
+ 23005 continue
+ 1
+Warning: Label 23005 at (1) defined but not used [-Wunused-label]
+rqfnb.f:36:5:
+
+ 23001 continue
+ 1
+Warning: Label 23001 at (1) defined but not used [-Wunused-label]
+rqfnb.f:169:5:
+
+ 23043 continue
+ 1
+Warning: Label 23043 at (1) defined but not used [-Wunused-label]
+rqfnb.f:163:5:
+
+ 23041 continue
+ 1
+Warning: Label 23041 at (1) defined but not used [-Wunused-label]
+rqfnb.f:165:5:
+
+ 23039 continue
+ 1
+Warning: Label 23039 at (1) defined but not used [-Wunused-label]
+clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o quokar.so init.o rqbr.o rqfnb.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [quokar.so] Error 1
+ERROR: compilation failed for package ‘quokar’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/quokar/old/quokar.Rcheck/quokar’
+
+```
+# qwraps2
+
+
+
+* Version: 0.4.1
+* Source code: https://github.com/cran/qwraps2
+* URL: https://github.com/dewittpe/qwraps2/
+* Date/Publication: 2019-03-15 06:40:03 UTC
+* Number of recursive dependencies: 63
+
+Run `revdep_details(,"qwraps2")` for more info
+
+
+
+## In both
+
+* checking whether package ‘qwraps2’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/qwraps2/new/qwraps2.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘qwraps2’ ...
+** package ‘qwraps2’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/qwraps2/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/qwraps2/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c RcppExports.cpp -o RcppExports.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/qwraps2/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/qwraps2/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c logit.cpp -o logit.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/qwraps2/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/qwraps2/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c traprule.cpp -o traprule.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o qwraps2.so RcppExports.o logit.o traprule.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [qwraps2.so] Error 1
+ERROR: compilation failed for package ‘qwraps2’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/qwraps2/new/qwraps2.Rcheck/qwraps2’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘qwraps2’ ...
+** package ‘qwraps2’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/qwraps2/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/qwraps2/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c RcppExports.cpp -o RcppExports.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/qwraps2/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/qwraps2/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c logit.cpp -o logit.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/qwraps2/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/qwraps2/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c traprule.cpp -o traprule.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o qwraps2.so RcppExports.o logit.o traprule.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [qwraps2.so] Error 1
+ERROR: compilation failed for package ‘qwraps2’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/qwraps2/old/qwraps2.Rcheck/qwraps2’
+
+```
+# Rdrools
+
+
+
+* Version: 1.1.1
+* Source code: https://github.com/cran/Rdrools
+* Date/Publication: 2018-12-08 15:00:13 UTC
+* Number of recursive dependencies: 64
+
+Run `revdep_details(,"Rdrools")` for more info
+
+
+
+## In both
+
+* checking whether package ‘Rdrools’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/Rdrools/new/Rdrools.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘Rdrools’ ...
+** package ‘Rdrools’ successfully unpacked and MD5 sums checked
+** using staged installation
+** R
+** data
+*** moving datasets to lazyload DB
+** inst
+** byte-compile and prepare package for lazy loading
+WARNING: Initial Java 12 release has broken JNI support and does NOT work. Use stable Java 11 (or watch for 12u if avaiable).
+ERROR: Java exception occurred during rJava bootstrap - see stderr for Java stack trace.
+Exception in thread "main" java.lang.NullPointerException
+ at java.base/jdk.internal.reflect.Reflection.verifyMemberAccess(Reflection.java:130)
+ at java.base/java.lang.reflect.AccessibleObject.slowVerifyAccess(AccessibleObject.java:673)
+ at java.base/java.lang.reflect.AccessibleObject.verifyAccess(AccessibleObject.java:666)
+ at java.base/java.lang.reflect.AccessibleObject.checkAccess(AccessibleObject.java:638)
+ at java.base/java.lang.reflect.Field.checkAccess(Field.java:1075)
+ at java.base/java.lang.reflect.Field.get(Field.java:416)
+Error: package or namespace load failed for ‘Rdroolsjars’:
+ .onLoad failed in loadNamespace() for 'Rdroolsjars', details:
+ call: .jcheck(silent = FALSE)
+ error: java.lang.NullPointerException.jcall(f, "Ljava/lang/Object;", "get", .jcast(ic, "java/lang/Object"))new("jobjRef", jobj = , jclass = "java/lang/NullPointerException")
+Error: package ‘Rdroolsjars’ could not be loaded
+Execution halted
+ERROR: lazy loading failed for package ‘Rdrools’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/Rdrools/new/Rdrools.Rcheck/Rdrools’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘Rdrools’ ...
+** package ‘Rdrools’ successfully unpacked and MD5 sums checked
+** using staged installation
+** R
+** data
+*** moving datasets to lazyload DB
+** inst
+** byte-compile and prepare package for lazy loading
+WARNING: Initial Java 12 release has broken JNI support and does NOT work. Use stable Java 11 (or watch for 12u if avaiable).
+ERROR: Java exception occurred during rJava bootstrap - see stderr for Java stack trace.
+Exception in thread "main" java.lang.NullPointerException
+ at java.base/jdk.internal.reflect.Reflection.verifyMemberAccess(Reflection.java:130)
+ at java.base/java.lang.reflect.AccessibleObject.slowVerifyAccess(AccessibleObject.java:673)
+ at java.base/java.lang.reflect.AccessibleObject.verifyAccess(AccessibleObject.java:666)
+ at java.base/java.lang.reflect.AccessibleObject.checkAccess(AccessibleObject.java:638)
+ at java.base/java.lang.reflect.Field.checkAccess(Field.java:1075)
+ at java.base/java.lang.reflect.Field.get(Field.java:416)
+Error: package or namespace load failed for ‘Rdroolsjars’:
+ .onLoad failed in loadNamespace() for 'Rdroolsjars', details:
+ call: .jcheck(silent = FALSE)
+ error: java.lang.NullPointerException.jcall(f, "Ljava/lang/Object;", "get", .jcast(ic, "java/lang/Object"))new("jobjRef", jobj = , jclass = "java/lang/NullPointerException")
+Error: package ‘Rdroolsjars’ could not be loaded
+Execution halted
+ERROR: lazy loading failed for package ‘Rdrools’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/Rdrools/old/Rdrools.Rcheck/Rdrools’
+
+```
+# resautonet
+
+
+
+* Version: 1.0
+* Source code: https://github.com/cran/resautonet
+* Date/Publication: 2019-03-16 23:00:08 UTC
+* Number of recursive dependencies: 36
+
+Run `revdep_details(,"resautonet")` for more info
+
+
+
+## In both
+
+* checking whether package ‘resautonet’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/resautonet/new/resautonet.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘resautonet’ ...
+** package ‘resautonet’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/resautonet/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/resautonet/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp -fPIC -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o
+clang: error: unsupported option '-fopenmp'
+make: *** [RcppExports.o] Error 1
+ERROR: compilation failed for package ‘resautonet’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/resautonet/new/resautonet.Rcheck/resautonet’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘resautonet’ ...
+** package ‘resautonet’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/resautonet/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/resautonet/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp -fPIC -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o
+clang: error: unsupported option '-fopenmp'
+make: *** [RcppExports.o] Error 1
+ERROR: compilation failed for package ‘resautonet’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/resautonet/old/resautonet.Rcheck/resautonet’
+
+```
+# RGMQL
+
+
+
+* Version: 1.2.0
+* Source code: https://github.com/cran/RGMQL
+* URL: http://www.bioinformatics.deib.polimi.it/genomic_computing/GMQL/
+* Date/Publication: 2018-10-30
+* Number of recursive dependencies: 73
+
+Run `revdep_details(,"RGMQL")` for more info
+
+
+
+## In both
+
+* checking whether package ‘RGMQL’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/RGMQL/new/RGMQL.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘RGMQL’ ...
+** using staged installation
+** R
+** inst
+** byte-compile and prepare package for lazy loading
+** help
+*** installing help indices
+** building package indices
+** installing vignettes
+** testing if installed package can be loaded from temporary location
+WARNING: Initial Java 12 release has broken JNI support and does NOT work. Use stable Java 11 (or watch for 12u if avaiable).
+ERROR: Java exception occurred during rJava bootstrap - see stderr for Java stack trace.
+Exception in thread "main" java.lang.NullPointerException
+ at java.base/jdk.internal.reflect.Reflection.verifyMemberAccess(Reflection.java:130)
+ at java.base/java.lang.reflect.AccessibleObject.slowVerifyAccess(AccessibleObject.java:673)
+ at java.base/java.lang.reflect.AccessibleObject.verifyAccess(AccessibleObject.java:666)
+ at java.base/java.lang.reflect.AccessibleObject.checkAccess(AccessibleObject.java:638)
+ at java.base/java.lang.reflect.Field.checkAccess(Field.java:1075)
+ at java.base/java.lang.reflect.Field.get(Field.java:416)
+Error: package or namespace load failed for ‘RGMQL’:
+ .onLoad failed in loadNamespace() for 'RGMQL', details:
+ call: .jcheck(silent = FALSE)
+ error: java.lang.NullPointerException.jcall(f, "Ljava/lang/Object;", "get", .jcast(ic, "java/lang/Object"))new("jobjRef", jobj = , jclass = "java/lang/NullPointerException")
+Error: loading failed
+Execution halted
+ERROR: loading failed
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/RGMQL/new/RGMQL.Rcheck/RGMQL’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘RGMQL’ ...
+** using staged installation
+** R
+** inst
+** byte-compile and prepare package for lazy loading
+** help
+*** installing help indices
+** building package indices
+** installing vignettes
+** testing if installed package can be loaded from temporary location
+WARNING: Initial Java 12 release has broken JNI support and does NOT work. Use stable Java 11 (or watch for 12u if avaiable).
+ERROR: Java exception occurred during rJava bootstrap - see stderr for Java stack trace.
+Exception in thread "main" java.lang.NullPointerException
+ at java.base/jdk.internal.reflect.Reflection.verifyMemberAccess(Reflection.java:130)
+ at java.base/java.lang.reflect.AccessibleObject.slowVerifyAccess(AccessibleObject.java:673)
+ at java.base/java.lang.reflect.AccessibleObject.verifyAccess(AccessibleObject.java:666)
+ at java.base/java.lang.reflect.AccessibleObject.checkAccess(AccessibleObject.java:638)
+ at java.base/java.lang.reflect.Field.checkAccess(Field.java:1075)
+ at java.base/java.lang.reflect.Field.get(Field.java:416)
+Error: package or namespace load failed for ‘RGMQL’:
+ .onLoad failed in loadNamespace() for 'RGMQL', details:
+ call: .jcheck(silent = FALSE)
+ error: java.lang.NullPointerException.jcall(f, "Ljava/lang/Object;", "get", .jcast(ic, "java/lang/Object"))new("jobjRef", jobj = , jclass = "java/lang/NullPointerException")
+Error: loading failed
+Execution halted
+ERROR: loading failed
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/RGMQL/old/RGMQL.Rcheck/RGMQL’
+
+```
+# rmcfs
+
+
+
+* Version: 1.2.15
+* Source code: https://github.com/cran/rmcfs
+* URL: www.ipipan.eu/staff/m.draminski/mcfs.html
+* Date/Publication: 2018-10-20 18:40:03 UTC
+* Number of recursive dependencies: 48
+
+Run `revdep_details(,"rmcfs")` for more info
+
+
+
+## In both
+
+* checking whether package ‘rmcfs’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/rmcfs/new/rmcfs.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘rmcfs’ ...
+** package ‘rmcfs’ successfully unpacked and MD5 sums checked
+** using staged installation
+** R
+** inst
+** byte-compile and prepare package for lazy loading
+** help
+*** installing help indices
+** building package indices
+** installing vignettes
+** testing if installed package can be loaded from temporary location
+WARNING: Initial Java 12 release has broken JNI support and does NOT work. Use stable Java 11 (or watch for 12u if avaiable).
+ERROR: Java exception occurred during rJava bootstrap - see stderr for Java stack trace.
+Exception in thread "main" java.lang.NullPointerException
+ at java.base/jdk.internal.reflect.Reflection.verifyMemberAccess(Reflection.java:130)
+ at java.base/java.lang.reflect.AccessibleObject.slowVerifyAccess(AccessibleObject.java:673)
+ at java.base/java.lang.reflect.AccessibleObject.verifyAccess(AccessibleObject.java:666)
+ at java.base/java.lang.reflect.AccessibleObject.checkAccess(AccessibleObject.java:638)
+ at java.base/java.lang.reflect.Field.checkAccess(Field.java:1075)
+ at java.base/java.lang.reflect.Field.get(Field.java:416)
+Error: package or namespace load failed for ‘rmcfs’:
+ .onLoad failed in loadNamespace() for 'rmcfs', details:
+ call: .jcheck(silent = FALSE)
+ error: java.lang.NullPointerException.jcall(f, "Ljava/lang/Object;", "get", .jcast(ic, "java/lang/Object"))new("jobjRef", jobj = , jclass = "java/lang/NullPointerException")
+Error: loading failed
+Execution halted
+ERROR: loading failed
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/rmcfs/new/rmcfs.Rcheck/rmcfs’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘rmcfs’ ...
+** package ‘rmcfs’ successfully unpacked and MD5 sums checked
+** using staged installation
+** R
+** inst
+** byte-compile and prepare package for lazy loading
+** help
+*** installing help indices
+** building package indices
+** installing vignettes
+** testing if installed package can be loaded from temporary location
+WARNING: Initial Java 12 release has broken JNI support and does NOT work. Use stable Java 11 (or watch for 12u if avaiable).
+ERROR: Java exception occurred during rJava bootstrap - see stderr for Java stack trace.
+Exception in thread "main" java.lang.NullPointerException
+ at java.base/jdk.internal.reflect.Reflection.verifyMemberAccess(Reflection.java:130)
+ at java.base/java.lang.reflect.AccessibleObject.slowVerifyAccess(AccessibleObject.java:673)
+ at java.base/java.lang.reflect.AccessibleObject.verifyAccess(AccessibleObject.java:666)
+ at java.base/java.lang.reflect.AccessibleObject.checkAccess(AccessibleObject.java:638)
+ at java.base/java.lang.reflect.Field.checkAccess(Field.java:1075)
+ at java.base/java.lang.reflect.Field.get(Field.java:416)
+Error: package or namespace load failed for ‘rmcfs’:
+ .onLoad failed in loadNamespace() for 'rmcfs', details:
+ call: .jcheck(silent = FALSE)
+ error: java.lang.NullPointerException.jcall(f, "Ljava/lang/Object;", "get", .jcast(ic, "java/lang/Object"))new("jobjRef", jobj = , jclass = "java/lang/NullPointerException")
+Error: loading failed
+Execution halted
+ERROR: loading failed
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/rmcfs/old/rmcfs.Rcheck/rmcfs’
+
+```
+# rpcdsearch
+
+
+
+* Version: 1.0
+* Source code: https://github.com/cran/rpcdsearch
+* Date/Publication: 2016-01-18 10:05:38
+* Number of recursive dependencies: 49
+
+Run `revdep_details(,"rpcdsearch")` for more info
+
+
+
+## In both
+
+* checking whether package ‘rpcdsearch’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/rpcdsearch/new/rpcdsearch.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘rpcdsearch’ ...
+** package ‘rpcdsearch’ successfully unpacked and MD5 sums checked
+** using staged installation
+** R
+** inst
+** byte-compile and prepare package for lazy loading
+WARNING: Initial Java 12 release has broken JNI support and does NOT work. Use stable Java 11 (or watch for 12u if avaiable).
+ERROR: Java exception occurred during rJava bootstrap - see stderr for Java stack trace.
+Exception in thread "main" java.lang.NullPointerException
+ at java.base/jdk.internal.reflect.Reflection.verifyMemberAccess(Reflection.java:130)
+ at java.base/java.lang.reflect.AccessibleObject.slowVerifyAccess(AccessibleObject.java:673)
+ at java.base/java.lang.reflect.AccessibleObject.verifyAccess(AccessibleObject.java:666)
+ at java.base/java.lang.reflect.AccessibleObject.checkAccess(AccessibleObject.java:638)
+ at java.base/java.lang.reflect.Field.checkAccess(Field.java:1075)
+ at java.base/java.lang.reflect.Field.get(Field.java:416)
+Error: .onLoad failed in loadNamespace() for 'xlsx', details:
+ call: .jcheck(silent = FALSE)
+ error: java.lang.NullPointerException.jcall(f, "Ljava/lang/Object;", "get", .jcast(ic, "java/lang/Object"))new("jobjRef", jobj = , jclass = "java/lang/NullPointerException")
+Execution halted
+ERROR: lazy loading failed for package ‘rpcdsearch’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/rpcdsearch/new/rpcdsearch.Rcheck/rpcdsearch’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘rpcdsearch’ ...
+** package ‘rpcdsearch’ successfully unpacked and MD5 sums checked
+** using staged installation
+** R
+** inst
+** byte-compile and prepare package for lazy loading
+WARNING: Initial Java 12 release has broken JNI support and does NOT work. Use stable Java 11 (or watch for 12u if avaiable).
+ERROR: Java exception occurred during rJava bootstrap - see stderr for Java stack trace.
+Exception in thread "main" java.lang.NullPointerException
+ at java.base/jdk.internal.reflect.Reflection.verifyMemberAccess(Reflection.java:130)
+ at java.base/java.lang.reflect.AccessibleObject.slowVerifyAccess(AccessibleObject.java:673)
+ at java.base/java.lang.reflect.AccessibleObject.verifyAccess(AccessibleObject.java:666)
+ at java.base/java.lang.reflect.AccessibleObject.checkAccess(AccessibleObject.java:638)
+ at java.base/java.lang.reflect.Field.checkAccess(Field.java:1075)
+ at java.base/java.lang.reflect.Field.get(Field.java:416)
+Error: .onLoad failed in loadNamespace() for 'xlsx', details:
+ call: .jcheck(silent = FALSE)
+ error: java.lang.NullPointerException.jcall(f, "Ljava/lang/Object;", "get", .jcast(ic, "java/lang/Object"))new("jobjRef", jobj = , jclass = "java/lang/NullPointerException")
+Execution halted
+ERROR: lazy loading failed for package ‘rpcdsearch’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/rpcdsearch/old/rpcdsearch.Rcheck/rpcdsearch’
+
+```
+# RSSL
+
+
+
+* Version: 0.8
+* Source code: https://github.com/cran/RSSL
+* URL: http://www.github.com/jkrijthe/RSSL
+* BugReports: http://www.github.com/jkrijthe/RSSL
+* Date/Publication: 2019-03-08 18:42:41 UTC
+* Number of recursive dependencies: 60
+
+Run `revdep_details(,"RSSL")` for more info
+
+
+
+## In both
+
+* checking whether package ‘RSSL’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/RSSL/new/RSSL.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘RSSL’ ...
+** package ‘RSSL’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RSSL/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RSSL/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c GRFClassifier.cpp -o GRFClassifier.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RSSL/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RSSL/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c RcppExports.cpp -o RcppExports.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RSSL/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RSSL/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c Rsvm.c -o Rsvm.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RSSL/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RSSL/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c init.c -o init.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RSSL/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RSSL/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c ssl.cpp -o ssl.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RSSL/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RSSL/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c svm.cpp -o svm.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RSSL/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RSSL/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c svmlin_rcpp.cpp -o svmlin_rcpp.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RSSL/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RSSL/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c utils.cpp -o utils.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o RSSL.so GRFClassifier.o RcppExports.o Rsvm.o init.o ssl.o svm.o svmlin_rcpp.o utils.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [RSSL.so] Error 1
+ERROR: compilation failed for package ‘RSSL’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/RSSL/new/RSSL.Rcheck/RSSL’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘RSSL’ ...
+** package ‘RSSL’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RSSL/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RSSL/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c GRFClassifier.cpp -o GRFClassifier.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RSSL/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RSSL/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c RcppExports.cpp -o RcppExports.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RSSL/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RSSL/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c Rsvm.c -o Rsvm.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RSSL/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RSSL/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c init.c -o init.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RSSL/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RSSL/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c ssl.cpp -o ssl.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RSSL/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RSSL/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c svm.cpp -o svm.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RSSL/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RSSL/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c svmlin_rcpp.cpp -o svmlin_rcpp.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RSSL/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RSSL/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c utils.cpp -o utils.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o RSSL.so GRFClassifier.o RcppExports.o Rsvm.o init.o ssl.o svm.o svmlin_rcpp.o utils.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [RSSL.so] Error 1
+ERROR: compilation failed for package ‘RSSL’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/RSSL/old/RSSL.Rcheck/RSSL’
+
+```
+# RtutoR
+
+
+
+* Version: 1.2
+* Source code: https://github.com/cran/RtutoR
+* Date/Publication: 2018-09-14 07:50:07 UTC
+* Number of recursive dependencies: 108
+
+Run `revdep_details(,"RtutoR")` for more info
+
+
+
+## In both
+
+* checking whether package ‘RtutoR’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/RtutoR/new/RtutoR.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘RtutoR’ ...
+** package ‘RtutoR’ successfully unpacked and MD5 sums checked
+** using staged installation
+** R
+** inst
+** byte-compile and prepare package for lazy loading
+WARNING: Initial Java 12 release has broken JNI support and does NOT work. Use stable Java 11 (or watch for 12u if avaiable).
+ERROR: Java exception occurred during rJava bootstrap - see stderr for Java stack trace.
+Exception in thread "main" java.lang.NullPointerException
+ at java.base/jdk.internal.reflect.Reflection.verifyMemberAccess(Reflection.java:130)
+ at java.base/java.lang.reflect.AccessibleObject.slowVerifyAccess(AccessibleObject.java:673)
+ at java.base/java.lang.reflect.AccessibleObject.verifyAccess(AccessibleObject.java:666)
+ at java.base/java.lang.reflect.AccessibleObject.checkAccess(AccessibleObject.java:638)
+ at java.base/java.lang.reflect.Field.checkAccess(Field.java:1075)
+ at java.base/java.lang.reflect.Field.get(Field.java:416)
+Error: .onLoad failed in loadNamespace() for 'RWekajars', details:
+ call: .jcheck(silent = FALSE)
+ error: java.lang.NullPointerException.jcall(f, "Ljava/lang/Object;", "get", .jcast(ic, "java/lang/Object"))new("jobjRef", jobj = , jclass = "java/lang/NullPointerException")
+Execution halted
+ERROR: lazy loading failed for package ‘RtutoR’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/RtutoR/new/RtutoR.Rcheck/RtutoR’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘RtutoR’ ...
+** package ‘RtutoR’ successfully unpacked and MD5 sums checked
+** using staged installation
+** R
+** inst
+** byte-compile and prepare package for lazy loading
+WARNING: Initial Java 12 release has broken JNI support and does NOT work. Use stable Java 11 (or watch for 12u if avaiable).
+ERROR: Java exception occurred during rJava bootstrap - see stderr for Java stack trace.
+Exception in thread "main" java.lang.NullPointerException
+ at java.base/jdk.internal.reflect.Reflection.verifyMemberAccess(Reflection.java:130)
+ at java.base/java.lang.reflect.AccessibleObject.slowVerifyAccess(AccessibleObject.java:673)
+ at java.base/java.lang.reflect.AccessibleObject.verifyAccess(AccessibleObject.java:666)
+ at java.base/java.lang.reflect.AccessibleObject.checkAccess(AccessibleObject.java:638)
+ at java.base/java.lang.reflect.Field.checkAccess(Field.java:1075)
+ at java.base/java.lang.reflect.Field.get(Field.java:416)
+Error: .onLoad failed in loadNamespace() for 'RWekajars', details:
+ call: .jcheck(silent = FALSE)
+ error: java.lang.NullPointerException.jcall(f, "Ljava/lang/Object;", "get", .jcast(ic, "java/lang/Object"))new("jobjRef", jobj = , jclass = "java/lang/NullPointerException")
+Execution halted
+ERROR: lazy loading failed for package ‘RtutoR’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/RtutoR/old/RtutoR.Rcheck/RtutoR’
+
+```
+# RxODE
+
+
+
+* Version: 0.8.0-9
+* Source code: https://github.com/cran/RxODE
+* URL: https://www.r-project.org, https://github.com/nlmixrdevelopment/RxODE
+* BugReports: https://github.com/nlmixrdevelopment/RxODE/issues
+* Date/Publication: 2018-12-10 10:00:07 UTC
+* Number of recursive dependencies: 108
+
+Run `revdep_details(,"RxODE")` for more info
+
+
+
+## In both
+
+* checking whether package ‘RxODE’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/RxODE/new/RxODE.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘RxODE’ ...
+** package ‘RxODE’ successfully unpacked and MD5 sums checked
+** using staged installation
+checking for gcc... clang
+checking whether the C compiler works... yes
+checking for C compiler default output file name... a.out
+checking for suffix of executables...
+checking whether we are cross compiling... no
+checking for suffix of object files... o
+checking whether we are using the GNU C compiler... yes
+checking whether clang accepts -g... yes
+checking for clang option to accept ISO C89... none needed
+checking for clang option to support OpenMP... unsupported
+configure: creating ./config.status
+config.status: creating src/Makevars
+--------[begin src/Makevars]--------
+# -*- mode: makefile-gmake -*-
+CXX_STD = CXX11
+
+################################################################################
+## Package library flags.
+PKG_LIBS = $(LAPACK_LIBS) $(BLAS_LIBS) $(FLIBS)
+## add -lprofiler for access to gperftools; You also have to have -g
+## https://stackoverflow.com/questions/13224322/profiling-rcpp-code-on-os-x
+## -Wl,--no-as-needed -lprofiler -Wl,--as-needed
+## Clang UBSAN requires -lubsan
+# PKG_LIBS = $(LAPACK_LIBS) $(BLAS_LIBS) $(FLIBS) -lubsan
+
+################################################################################
+## Compiling flags
+
+## fsanitize=address = ASAN debugging with gcc
+# PKG_FFLAGS = -g -ggdb -O0 -fno-inline-functions -fsanitize=address,undefined,bounds-strict -fno-omit-frame-pointer -Wall -Wextra $(FPICFLAGS)
+# PKG_CFLAGS = -g -ggdb -O0 -fno-inline-functions -fsanitize=address,undefined,bounds-strict -fno-omit-frame-pointer -Wall -Wextra
+# PKG_CPPFLAGS = -g -ggdb -O0 -fno-inline-functions -fsanitize=address,undefined,bounds-strict -fno-omit-frame-pointer -Wall -Wextra
+
+# Clang UBSAN debugging
+# PKG_FFLAGS = -g -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-omit-frame-pointer $(FPICFLAGS)
+# PKG_CFLAGS = -g -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-omit-frame-pointer -frtti
+# PKG_CPPFLAGS = -g -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-omit-frame-pointer -frtti
+
+## Standard debug for gdb and valgrind
+# PKG_FFLAGS = -g -ggdb -O0 -Wall -Wextra $(FPICFLAGS)
+# PKG_CFLAGS = -g -ggdb -O0 -Wall -Wextra
+# PKG_CPPFLAGS = -g -ggdb -O0 -Wall -Wextra
+
+# Release options
+PKG_FFLAGS = $(FPICFLAGS)
+PKG_FCFLAGS = $(FPICFLAGS)
+PKG_CFLAGS =
+PKG_CPPFLAGS =
+
+SOURCES_C = call_dvode.c dop853.c tran.c omegaChol.c init.c par_solve.c cfode.c common.c corfailure.c correction.c daxpy.c ddot.c dgefa.c dgesl.c dscal.c fnorm.c idamax.c intdy.c lsoda.c methodswitch.c orderswitch.c prja.c scaleh.c solsy.c stoda.c vmnorm.c strdup_printf.c rprintf.c box.c lbfgsR.c lincmt.c
+SOURCES_CPP = RcppExports.cpp WinDrive.cpp rxInv.cpp rxData.cpp eventTable.cpp inner.cpp
+SOURCES_FORTAN = dlsoda.f opkda1_abbr.f opkda2.f
+
+OBJECTS = $(SOURCES_C:.c=.o) $(SOURCES_FORTAN:.f=.o) $(SOURCES_CPP:.cpp=.o)
+
+
+--------[end src/Makevars]--------
+** libs
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c call_dvode.c -o call_dvode.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c dop853.c -o dop853.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c tran.c -o tran.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c omegaChol.c -o omegaChol.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c init.c -o init.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c par_solve.c -o par_solve.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c cfode.c -o cfode.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c common.c -o common.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c corfailure.c -o corfailure.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c correction.c -o correction.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c daxpy.c -o daxpy.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c ddot.c -o ddot.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c dgefa.c -o dgefa.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c dgesl.c -o dgesl.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c dscal.c -o dscal.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c fnorm.c -o fnorm.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c idamax.c -o idamax.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c intdy.c -o intdy.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c lsoda.c -o lsoda.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c methodswitch.c -o methodswitch.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c orderswitch.c -o orderswitch.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c prja.c -o prja.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c scaleh.c -o scaleh.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c solsy.c -o solsy.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c stoda.c -o stoda.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c vmnorm.c -o vmnorm.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c strdup_printf.c -o strdup_printf.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c rprintf.c -o rprintf.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c box.c -o box.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c lbfgsR.c -o lbfgsR.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c lincmt.c -o lincmt.o
+gfortran -fPIC -fPIC -Wall -g -O2 -c dlsoda.f -o dlsoda.o
+dlsoda.f:1455:0:
+
+ IF (IHIT) T = TCRIT
+
+Warning: 'ihit' may be used uninitialized in this function [-Wmaybe-uninitialized]
+dlsoda.f:1125:0:
+
+ LEN1S = LEN1S + LENWM
+
+Warning: 'lenwm' may be used uninitialized in this function [-Wmaybe-uninitialized]
+gfortran -fPIC -fPIC -Wall -g -O2 -c opkda1_abbr.f -o opkda1_abbr.o
+opkda1_abbr.f:305:40:
+
+ SUBROUTINE DSOLSY (WM, IWM, X, TEM)
+ 1
+Warning: Unused dummy argument 'tem' at (1) [-Wunused-dummy-argument]
+opkda1_abbr.f:700:0:
+
+ IF (IREDO .EQ. 0) GO TO 690
+
+Warning: 'iredo' may be used uninitialized in this function [-Wmaybe-uninitialized]
+opkda1_abbr.f:494:0:
+
+ 1 R, RH, RHDN, RHSM, RHUP, TOLD, DMNORM
+
+Warning: 'rh' may be used uninitialized in this function [-Wmaybe-uninitialized]
+gfortran -fPIC -fPIC -Wall -g -O2 -c opkda2.f -o opkda2.o
+opkda2.f:582:55:
+
+ SUBROUTINE XERRWD (MSG, NMES, NERR, LEVEL, NI, I1, I2, NR, R1, R2)
+ 1
+Warning: Unused dummy argument 'i1' at (1) [-Wunused-dummy-argument]
+opkda2.f:582:59:
+
+ SUBROUTINE XERRWD (MSG, NMES, NERR, LEVEL, NI, I1, I2, NR, R1, R2)
+ 1
+Warning: Unused dummy argument 'i2' at (1) [-Wunused-dummy-argument]
+opkda2.f:645:28:
+
+ CHARACTER(LEN=51) MSG1
+ 1
+Warning: Unused variable 'msg1' declared at (1) [-Wunused-variable]
+opkda2.f:646:28:
+
+ CHARACTER(LEN=61) MSG2
+ 1
+Warning: Unused variable 'msg2' declared at (1) [-Wunused-variable]
+opkda2.f:582:40:
+
+ SUBROUTINE XERRWD (MSG, NMES, NERR, LEVEL, NI, I1, I2, NR, R1, R2)
+ 1
+Warning: Unused dummy argument 'nerr' at (1) [-Wunused-dummy-argument]
+opkda2.f:582:51:
+
+ SUBROUTINE XERRWD (MSG, NMES, NERR, LEVEL, NI, I1, I2, NR, R1, R2)
+ 1
+Warning: Unused dummy argument 'ni' at (1) [-Wunused-dummy-argument]
+opkda2.f:582:63:
+
+ SUBROUTINE XERRWD (MSG, NMES, NERR, LEVEL, NI, I1, I2, NR, R1, R2)
+ 1
+Warning: Unused dummy argument 'nr' at (1) [-Wunused-dummy-argument]
+opkda2.f:582:67:
+
+ SUBROUTINE XERRWD (MSG, NMES, NERR, LEVEL, NI, I1, I2, NR, R1, R2)
+ 1
+Warning: Unused dummy argument 'r1' at (1) [-Wunused-dummy-argument]
+opkda2.f:582:71:
+
+ SUBROUTINE XERRWD (MSG, NMES, NERR, LEVEL, NI, I1, I2, NR, R1, R2)
+ 1
+Warning: Unused dummy argument 'r2' at (1) [-Wunused-dummy-argument]
+opkda2.f:750:0:
+
+ INTEGER FUNCTION IXSAV (IPAR, IVALUE, ISET)
+
+Warning: '__result_ixsav' may be used uninitialized in this function [-Wmaybe-uninitialized]
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c WinDrive.cpp -o WinDrive.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c rxInv.cpp -o rxInv.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c rxData.cpp -o rxData.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c eventTable.cpp -o eventTable.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c inner.cpp -o inner.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o RxODE.so call_dvode.o dop853.o tran.o omegaChol.o init.o par_solve.o cfode.o common.o corfailure.o correction.o daxpy.o ddot.o dgefa.o dgesl.o dscal.o fnorm.o idamax.o intdy.o lsoda.o methodswitch.o orderswitch.o prja.o scaleh.o solsy.o stoda.o vmnorm.o strdup_printf.o rprintf.o box.o lbfgsR.o lincmt.o dlsoda.o opkda1_abbr.o opkda2.o RcppExports.o WinDrive.o rxInv.o rxData.o eventTable.o inner.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [RxODE.so] Error 1
+ERROR: compilation failed for package ‘RxODE’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/RxODE/new/RxODE.Rcheck/RxODE’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘RxODE’ ...
+** package ‘RxODE’ successfully unpacked and MD5 sums checked
+** using staged installation
+checking for gcc... clang
+checking whether the C compiler works... yes
+checking for C compiler default output file name... a.out
+checking for suffix of executables...
+checking whether we are cross compiling... no
+checking for suffix of object files... o
+checking whether we are using the GNU C compiler... yes
+checking whether clang accepts -g... yes
+checking for clang option to accept ISO C89... none needed
+checking for clang option to support OpenMP... unsupported
+configure: creating ./config.status
+config.status: creating src/Makevars
+--------[begin src/Makevars]--------
+# -*- mode: makefile-gmake -*-
+CXX_STD = CXX11
+
+################################################################################
+## Package library flags.
+PKG_LIBS = $(LAPACK_LIBS) $(BLAS_LIBS) $(FLIBS)
+## add -lprofiler for access to gperftools; You also have to have -g
+## https://stackoverflow.com/questions/13224322/profiling-rcpp-code-on-os-x
+## -Wl,--no-as-needed -lprofiler -Wl,--as-needed
+## Clang UBSAN requires -lubsan
+# PKG_LIBS = $(LAPACK_LIBS) $(BLAS_LIBS) $(FLIBS) -lubsan
+
+################################################################################
+## Compiling flags
+
+## fsanitize=address = ASAN debugging with gcc
+# PKG_FFLAGS = -g -ggdb -O0 -fno-inline-functions -fsanitize=address,undefined,bounds-strict -fno-omit-frame-pointer -Wall -Wextra $(FPICFLAGS)
+# PKG_CFLAGS = -g -ggdb -O0 -fno-inline-functions -fsanitize=address,undefined,bounds-strict -fno-omit-frame-pointer -Wall -Wextra
+# PKG_CPPFLAGS = -g -ggdb -O0 -fno-inline-functions -fsanitize=address,undefined,bounds-strict -fno-omit-frame-pointer -Wall -Wextra
+
+# Clang UBSAN debugging
+# PKG_FFLAGS = -g -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-omit-frame-pointer $(FPICFLAGS)
+# PKG_CFLAGS = -g -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-omit-frame-pointer -frtti
+# PKG_CPPFLAGS = -g -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-omit-frame-pointer -frtti
+
+## Standard debug for gdb and valgrind
+# PKG_FFLAGS = -g -ggdb -O0 -Wall -Wextra $(FPICFLAGS)
+# PKG_CFLAGS = -g -ggdb -O0 -Wall -Wextra
+# PKG_CPPFLAGS = -g -ggdb -O0 -Wall -Wextra
+
+# Release options
+PKG_FFLAGS = $(FPICFLAGS)
+PKG_FCFLAGS = $(FPICFLAGS)
+PKG_CFLAGS =
+PKG_CPPFLAGS =
+
+SOURCES_C = call_dvode.c dop853.c tran.c omegaChol.c init.c par_solve.c cfode.c common.c corfailure.c correction.c daxpy.c ddot.c dgefa.c dgesl.c dscal.c fnorm.c idamax.c intdy.c lsoda.c methodswitch.c orderswitch.c prja.c scaleh.c solsy.c stoda.c vmnorm.c strdup_printf.c rprintf.c box.c lbfgsR.c lincmt.c
+SOURCES_CPP = RcppExports.cpp WinDrive.cpp rxInv.cpp rxData.cpp eventTable.cpp inner.cpp
+SOURCES_FORTAN = dlsoda.f opkda1_abbr.f opkda2.f
+
+OBJECTS = $(SOURCES_C:.c=.o) $(SOURCES_FORTAN:.f=.o) $(SOURCES_CPP:.cpp=.o)
+
+
+--------[end src/Makevars]--------
+** libs
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c call_dvode.c -o call_dvode.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c dop853.c -o dop853.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c tran.c -o tran.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c omegaChol.c -o omegaChol.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c init.c -o init.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c par_solve.c -o par_solve.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c cfode.c -o cfode.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c common.c -o common.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c corfailure.c -o corfailure.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c correction.c -o correction.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c daxpy.c -o daxpy.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c ddot.c -o ddot.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c dgefa.c -o dgefa.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c dgesl.c -o dgesl.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c dscal.c -o dscal.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c fnorm.c -o fnorm.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c idamax.c -o idamax.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c intdy.c -o intdy.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c lsoda.c -o lsoda.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c methodswitch.c -o methodswitch.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c orderswitch.c -o orderswitch.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c prja.c -o prja.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c scaleh.c -o scaleh.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c solsy.c -o solsy.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c stoda.c -o stoda.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c vmnorm.c -o vmnorm.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c strdup_printf.c -o strdup_printf.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c rprintf.c -o rprintf.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c box.c -o box.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c lbfgsR.c -o lbfgsR.o
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c lincmt.c -o lincmt.o
+gfortran -fPIC -fPIC -Wall -g -O2 -c dlsoda.f -o dlsoda.o
+dlsoda.f:1455:0:
+
+ IF (IHIT) T = TCRIT
+
+Warning: 'ihit' may be used uninitialized in this function [-Wmaybe-uninitialized]
+dlsoda.f:1125:0:
+
+ LEN1S = LEN1S + LENWM
+
+Warning: 'lenwm' may be used uninitialized in this function [-Wmaybe-uninitialized]
+gfortran -fPIC -fPIC -Wall -g -O2 -c opkda1_abbr.f -o opkda1_abbr.o
+opkda1_abbr.f:305:40:
+
+ SUBROUTINE DSOLSY (WM, IWM, X, TEM)
+ 1
+Warning: Unused dummy argument 'tem' at (1) [-Wunused-dummy-argument]
+opkda1_abbr.f:700:0:
+
+ IF (IREDO .EQ. 0) GO TO 690
+
+Warning: 'iredo' may be used uninitialized in this function [-Wmaybe-uninitialized]
+opkda1_abbr.f:494:0:
+
+ 1 R, RH, RHDN, RHSM, RHUP, TOLD, DMNORM
+
+Warning: 'rh' may be used uninitialized in this function [-Wmaybe-uninitialized]
+gfortran -fPIC -fPIC -Wall -g -O2 -c opkda2.f -o opkda2.o
+opkda2.f:582:55:
+
+ SUBROUTINE XERRWD (MSG, NMES, NERR, LEVEL, NI, I1, I2, NR, R1, R2)
+ 1
+Warning: Unused dummy argument 'i1' at (1) [-Wunused-dummy-argument]
+opkda2.f:582:59:
+
+ SUBROUTINE XERRWD (MSG, NMES, NERR, LEVEL, NI, I1, I2, NR, R1, R2)
+ 1
+Warning: Unused dummy argument 'i2' at (1) [-Wunused-dummy-argument]
+opkda2.f:645:28:
+
+ CHARACTER(LEN=51) MSG1
+ 1
+Warning: Unused variable 'msg1' declared at (1) [-Wunused-variable]
+opkda2.f:646:28:
+
+ CHARACTER(LEN=61) MSG2
+ 1
+Warning: Unused variable 'msg2' declared at (1) [-Wunused-variable]
+opkda2.f:582:40:
+
+ SUBROUTINE XERRWD (MSG, NMES, NERR, LEVEL, NI, I1, I2, NR, R1, R2)
+ 1
+Warning: Unused dummy argument 'nerr' at (1) [-Wunused-dummy-argument]
+opkda2.f:582:51:
+
+ SUBROUTINE XERRWD (MSG, NMES, NERR, LEVEL, NI, I1, I2, NR, R1, R2)
+ 1
+Warning: Unused dummy argument 'ni' at (1) [-Wunused-dummy-argument]
+opkda2.f:582:63:
+
+ SUBROUTINE XERRWD (MSG, NMES, NERR, LEVEL, NI, I1, I2, NR, R1, R2)
+ 1
+Warning: Unused dummy argument 'nr' at (1) [-Wunused-dummy-argument]
+opkda2.f:582:67:
+
+ SUBROUTINE XERRWD (MSG, NMES, NERR, LEVEL, NI, I1, I2, NR, R1, R2)
+ 1
+Warning: Unused dummy argument 'r1' at (1) [-Wunused-dummy-argument]
+opkda2.f:582:71:
+
+ SUBROUTINE XERRWD (MSG, NMES, NERR, LEVEL, NI, I1, I2, NR, R1, R2)
+ 1
+Warning: Unused dummy argument 'r2' at (1) [-Wunused-dummy-argument]
+opkda2.f:750:0:
+
+ INTEGER FUNCTION IXSAV (IPAR, IVALUE, ISET)
+
+Warning: '__result_ixsav' may be used uninitialized in this function [-Wmaybe-uninitialized]
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c WinDrive.cpp -o WinDrive.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c rxInv.cpp -o rxInv.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c rxData.cpp -o rxData.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c eventTable.cpp -o eventTable.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/dparser/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/RxODE/PreciseSums/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c inner.cpp -o inner.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o RxODE.so call_dvode.o dop853.o tran.o omegaChol.o init.o par_solve.o cfode.o common.o corfailure.o correction.o daxpy.o ddot.o dgefa.o dgesl.o dscal.o fnorm.o idamax.o intdy.o lsoda.o methodswitch.o orderswitch.o prja.o scaleh.o solsy.o stoda.o vmnorm.o strdup_printf.o rprintf.o box.o lbfgsR.o lincmt.o dlsoda.o opkda1_abbr.o opkda2.o RcppExports.o WinDrive.o rxInv.o rxData.o eventTable.o inner.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [RxODE.so] Error 1
+ERROR: compilation failed for package ‘RxODE’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/RxODE/old/RxODE.Rcheck/RxODE’
+
+```
+# sarima
+
+
+
+* Version: 0.8.0
+* Source code: https://github.com/cran/sarima
+* Date/Publication: 2019-04-13 23:22:38 UTC
+* Number of recursive dependencies: 56
+
+Run `revdep_details(,"sarima")` for more info
+
+
+
+## In both
+
+* checking whether package ‘sarima’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/sarima/new/sarima.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘sarima’ ...
+** package ‘sarima’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/sarima/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/sarima/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp -fPIC -Wall -g -O2 -c Kalman0b.cpp -o Kalman0b.o
+clang: error: unsupported option '-fopenmp'
+make: *** [Kalman0b.o] Error 1
+ERROR: compilation failed for package ‘sarima’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/sarima/new/sarima.Rcheck/sarima’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘sarima’ ...
+** package ‘sarima’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/sarima/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/sarima/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp -fPIC -Wall -g -O2 -c Kalman0b.cpp -o Kalman0b.o
+clang: error: unsupported option '-fopenmp'
+make: *** [Kalman0b.o] Error 1
+ERROR: compilation failed for package ‘sarima’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/sarima/old/sarima.Rcheck/sarima’
+
+```
+# scanstatistics
+
+
+
+* Version: 1.0.1
+* Source code: https://github.com/cran/scanstatistics
+* URL: https://github.com/BenjaK/scanstatistics
+* BugReports: https://github.com/BenjaK/scanstatistics/issues
+* Date/Publication: 2018-01-24 12:37:44 UTC
+* Number of recursive dependencies: 67
+
+Run `revdep_details(,"scanstatistics")` for more info
+
+
+
+## In both
+
+* checking whether package ‘scanstatistics’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/scanstatistics/new/scanstatistics.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘scanstatistics’ ...
+** package ‘scanstatistics’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/scanstatistics/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/scanstatistics/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/scanstatistics/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/scanstatistics/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c probability_functions.cpp -o probability_functions.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/scanstatistics/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/scanstatistics/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c scan_bayes_negbin.cpp -o scan_bayes_negbin.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/scanstatistics/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/scanstatistics/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c scan_eb_negbin.cpp -o scan_eb_negbin.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/scanstatistics/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/scanstatistics/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c scan_eb_poisson.cpp -o scan_eb_poisson.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/scanstatistics/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/scanstatistics/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c scan_eb_zip.cpp -o scan_eb_zip.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/scanstatistics/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/scanstatistics/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c scan_pb_perm.cpp -o scan_pb_perm.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/scanstatistics/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/scanstatistics/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c scan_pb_poisson.cpp -o scan_pb_poisson.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/scanstatistics/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/scanstatistics/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c scan_utility.cpp -o scan_utility.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o scanstatistics.so RcppExports.o probability_functions.o scan_bayes_negbin.o scan_eb_negbin.o scan_eb_poisson.o scan_eb_zip.o scan_pb_perm.o scan_pb_poisson.o scan_utility.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [scanstatistics.so] Error 1
+ERROR: compilation failed for package ‘scanstatistics’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/scanstatistics/new/scanstatistics.Rcheck/scanstatistics’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘scanstatistics’ ...
+** package ‘scanstatistics’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/scanstatistics/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/scanstatistics/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/scanstatistics/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/scanstatistics/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c probability_functions.cpp -o probability_functions.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/scanstatistics/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/scanstatistics/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c scan_bayes_negbin.cpp -o scan_bayes_negbin.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/scanstatistics/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/scanstatistics/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c scan_eb_negbin.cpp -o scan_eb_negbin.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/scanstatistics/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/scanstatistics/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c scan_eb_poisson.cpp -o scan_eb_poisson.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/scanstatistics/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/scanstatistics/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c scan_eb_zip.cpp -o scan_eb_zip.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/scanstatistics/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/scanstatistics/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c scan_pb_perm.cpp -o scan_pb_perm.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/scanstatistics/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/scanstatistics/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c scan_pb_poisson.cpp -o scan_pb_poisson.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/scanstatistics/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/scanstatistics/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c scan_utility.cpp -o scan_utility.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o scanstatistics.so RcppExports.o probability_functions.o scan_bayes_negbin.o scan_eb_negbin.o scan_eb_poisson.o scan_eb_zip.o scan_pb_perm.o scan_pb_poisson.o scan_utility.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [scanstatistics.so] Error 1
+ERROR: compilation failed for package ‘scanstatistics’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/scanstatistics/old/scanstatistics.Rcheck/scanstatistics’
+
+```
+# scfind
+
+
+
+* Version: 1.4.1
+* Source code: https://github.com/cran/scfind
+* URL: https://github.com/hemberg-lab/scfind
+* BugReports: https://support.bioconductor.org/t/scfind/
+* Date/Publication: 2019-01-04
+* Number of recursive dependencies: 63
+
+Run `revdep_details(,"scfind")` for more info
+
+
+
+## In both
+
+* checking whether package ‘scfind’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/scfind/new/scfind.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘scfind’ ...
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/scfind/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c RcppExports.cpp -o RcppExports.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/scfind/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c eliasFano.cpp -o eliasFano.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o scfind.so RcppExports.o eliasFano.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [scfind.so] Error 1
+ERROR: compilation failed for package ‘scfind’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/scfind/new/scfind.Rcheck/scfind’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘scfind’ ...
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/scfind/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c RcppExports.cpp -o RcppExports.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/scfind/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c eliasFano.cpp -o eliasFano.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o scfind.so RcppExports.o eliasFano.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [scfind.so] Error 1
+ERROR: compilation failed for package ‘scfind’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/scfind/old/scfind.Rcheck/scfind’
+
+```
+# scmap
+
+
+
+* Version: 1.4.1
+* Source code: https://github.com/cran/scmap
+* URL: https://github.com/hemberg-lab/scmap
+* BugReports: https://support.bioconductor.org/t/scmap/
+* Date/Publication: 2019-01-04
+* Number of recursive dependencies: 77
+
+Run `revdep_details(,"scmap")` for more info
+
+
+
+## In both
+
+* checking whether package ‘scmap’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/scmap/new/scmap.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘scmap’ ...
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/scmap/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/scmap/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c RcppExports.cpp -o RcppExports.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/scmap/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/scmap/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c scmap.cpp -o scmap.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o scmap.so RcppExports.o scmap.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [scmap.so] Error 1
+ERROR: compilation failed for package ‘scmap’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/scmap/new/scmap.Rcheck/scmap’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘scmap’ ...
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/scmap/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/scmap/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c RcppExports.cpp -o RcppExports.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/scmap/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/scmap/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c scmap.cpp -o scmap.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o scmap.so RcppExports.o scmap.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [scmap.so] Error 1
+ERROR: compilation failed for package ‘scmap’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/scmap/old/scmap.Rcheck/scmap’
+
+```
+# SCPME
+
+
+
+* Version: 1.0
+* Source code: https://github.com/cran/SCPME
+* URL: https://github.com/MGallow/SCPME
+* BugReports: https://github.com/MGallow/SCPME/issues
+* Date/Publication: 2018-08-13 09:00:09 UTC
+* Number of recursive dependencies: 89
+
+Run `revdep_details(,"SCPME")` for more info
+
+
+
+## In both
+
+* checking whether package ‘SCPME’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/SCPME/new/SCPME.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘SCPME’ ...
+** package ‘SCPME’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/SCPME/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/SCPME/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/SCPME/RcppProgress/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c ADMM.cpp -o ADMM.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/SCPME/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/SCPME/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/SCPME/RcppProgress/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c CV.cpp -o CV.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/SCPME/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/SCPME/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/SCPME/RcppProgress/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c CVP.cpp -o CVP.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/SCPME/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/SCPME/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/SCPME/RcppProgress/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c RcppExports.cpp -o RcppExports.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/SCPME/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/SCPME/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/SCPME/RcppProgress/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c soft.cpp -o soft.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o SCPME.so ADMM.o CV.o CVP.o RcppExports.o soft.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [SCPME.so] Error 1
+ERROR: compilation failed for package ‘SCPME’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/SCPME/new/SCPME.Rcheck/SCPME’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘SCPME’ ...
+** package ‘SCPME’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/SCPME/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/SCPME/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/SCPME/RcppProgress/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c ADMM.cpp -o ADMM.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/SCPME/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/SCPME/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/SCPME/RcppProgress/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c CV.cpp -o CV.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/SCPME/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/SCPME/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/SCPME/RcppProgress/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c CVP.cpp -o CVP.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/SCPME/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/SCPME/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/SCPME/RcppProgress/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c RcppExports.cpp -o RcppExports.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/SCPME/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/SCPME/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/SCPME/RcppProgress/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c soft.cpp -o soft.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o SCPME.so ADMM.o CV.o CVP.o RcppExports.o soft.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [SCPME.so] Error 1
+ERROR: compilation failed for package ‘SCPME’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/SCPME/old/SCPME.Rcheck/SCPME’
+
+```
+# sf
+
+
+
+* Version: 0.7-4
+* Source code: https://github.com/cran/sf
+* URL: https://github.com/r-spatial/sf/
+* BugReports: https://github.com/r-spatial/sf/issues/
+* Date/Publication: 2019-04-25 22:30:03 UTC
+* Number of recursive dependencies: 123
+
+Run `revdep_details(,"sf")` for more info
+
+
+
+## In both
+
+* checking whether package ‘sf’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/sf/new/sf.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘sf’ ...
+** package ‘sf’ successfully unpacked and MD5 sums checked
+** using staged installation
+configure: CC: clang
+configure: CXX: clang++ -std=gnu++11
+checking for gdal-config... no
+no
+configure: error: gdal-config not found or not executable.
+ERROR: configuration failed for package ‘sf’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/sf/new/sf.Rcheck/sf’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘sf’ ...
+** package ‘sf’ successfully unpacked and MD5 sums checked
+** using staged installation
+configure: CC: clang
+configure: CXX: clang++ -std=gnu++11
+checking for gdal-config... no
+no
+configure: error: gdal-config not found or not executable.
+ERROR: configuration failed for package ‘sf’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/sf/old/sf.Rcheck/sf’
+
+```
+# simputation
+
+
+
+* Version: 0.2.2
+* Source code: https://github.com/cran/simputation
+* URL: https://github.com/markvanderloo/simputation
+* BugReports: https://github.com/markvanderloo/simputation/issues
+* Date/Publication: 2017-05-19 21:34:39 UTC
+* Number of recursive dependencies: 94
+
+Run `revdep_details(,"simputation")` for more info
+
+
+
+## In both
+
+* checking whether package ‘simputation’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/simputation/new/simputation.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘simputation’ ...
+** package ‘simputation’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp -fPIC -Wall -g -O2 -c R_register_native.c -o R_register_native.o
+clang: error: unsupported option '-fopenmp'
+make: *** [R_register_native.o] Error 1
+ERROR: compilation failed for package ‘simputation’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/simputation/new/simputation.Rcheck/simputation’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘simputation’ ...
+** package ‘simputation’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp -fPIC -Wall -g -O2 -c R_register_native.c -o R_register_native.o
+clang: error: unsupported option '-fopenmp'
+make: *** [R_register_native.o] Error 1
+ERROR: compilation failed for package ‘simputation’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/simputation/old/simputation.Rcheck/simputation’
+
+```
+# SpaCCr
+
+
+
+* Version: 0.1.0
+* Source code: https://github.com/cran/SpaCCr
+* Date/Publication: 2016-11-23 09:38:35
+* Number of recursive dependencies: 43
+
+Run `revdep_details(,"SpaCCr")` for more info
+
+
+
+## In both
+
+* checking whether package ‘SpaCCr’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/SpaCCr/new/SpaCCr.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘SpaCCr’ ...
+** package ‘SpaCCr’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/SpaCCr/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/SpaCCr/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c RcppExports.cpp -o RcppExports.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/SpaCCr/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/SpaCCr/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c SpaCC.cpp -o SpaCC.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o SpaCCr.so RcppExports.o SpaCC.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [SpaCCr.so] Error 1
+ERROR: compilation failed for package ‘SpaCCr’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/SpaCCr/new/SpaCCr.Rcheck/SpaCCr’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘SpaCCr’ ...
+** package ‘SpaCCr’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/SpaCCr/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/SpaCCr/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c RcppExports.cpp -o RcppExports.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/SpaCCr/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/SpaCCr/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c SpaCC.cpp -o SpaCC.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o SpaCCr.so RcppExports.o SpaCC.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [SpaCCr.so] Error 1
+ERROR: compilation failed for package ‘SpaCCr’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/SpaCCr/old/SpaCCr.Rcheck/SpaCCr’
+
+```
+# TCGAbiolinks
+
+
+
+* Version: 2.10.5
+* Source code: https://github.com/cran/TCGAbiolinks
+* URL: https://github.com/BioinformaticsFMRP/TCGAbiolinks
+* BugReports: https://github.com/BioinformaticsFMRP/TCGAbiolinks/issues
+* Date/Publication: 2019-03-20
+* Number of recursive dependencies: 246
+
+Run `revdep_details(,"TCGAbiolinks")` for more info
+
+
+
+## In both
+
+* checking whether package ‘TCGAbiolinks’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/TCGAbiolinks/new/TCGAbiolinks.Rcheck/00install.out’ for details.
+ ```
+
+* checking package dependencies ... NOTE
+ ```
+ Package suggested but not available for checking: ‘dnet’
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘TCGAbiolinks’ ...
+** using staged installation
+** R
+** data
+*** moving datasets to lazyload DB
+** inst
+** byte-compile and prepare package for lazy loading
+Error in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]]) :
+ there is no package called ‘sesameData’
+Calls: ... loadNamespace -> withRestarts -> withOneRestart -> doWithOneRestart
+Execution halted
+ERROR: lazy loading failed for package ‘TCGAbiolinks’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/TCGAbiolinks/new/TCGAbiolinks.Rcheck/TCGAbiolinks’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘TCGAbiolinks’ ...
+** using staged installation
+** R
+** data
+*** moving datasets to lazyload DB
+** inst
+** byte-compile and prepare package for lazy loading
+Error in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]]) :
+ there is no package called ‘sesameData’
+Calls: ... loadNamespace -> withRestarts -> withOneRestart -> doWithOneRestart
+Execution halted
+ERROR: lazy loading failed for package ‘TCGAbiolinks’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/TCGAbiolinks/old/TCGAbiolinks.Rcheck/TCGAbiolinks’
+
+```
+# telefit
+
+
+
+* Version: 1.0.1
+* Source code: https://github.com/cran/telefit
+* Date/Publication: 2019-02-18 10:50:03 UTC
+* Number of recursive dependencies: 74
+
+Run `revdep_details(,"telefit")` for more info
+
+
+
+## In both
+
+* checking whether package ‘telefit’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/telefit/new/telefit.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘telefit’ ...
+** package ‘telefit’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c GibbsSampler.cpp -o GibbsSampler.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c RWSampler.cpp -o RWSampler.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o
+In file included from RcppExports.cpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:1:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Core:535:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:2:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/LU:47:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Cholesky:12:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Jacobi:29:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Cholesky:43:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/QR:17:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Householder:27:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/SVD:48:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Geometry:58:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Eigenvalues:58:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:26:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/SparseCore:66:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:27:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/OrderingMethods:71:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:29:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/SparseCholesky:43:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:32:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/SparseQR:35:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:33:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/IterativeLinearSolvers:46:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:32:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/CholmodSupport:45:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:35:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/KroneckerProduct:34:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:39:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/Polynomials:135:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:40:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/SparseExtra:51:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+17 warnings generated.
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c covs.cpp -o covs.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c distributions.cpp -o distributions.o
+In file included from distributions.cpp:1:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:1:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Core:535:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from distributions.cpp:1:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:2:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/LU:47:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from distributions.cpp:1:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Cholesky:12:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Jacobi:29:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from distributions.cpp:1:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Cholesky:43:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from distributions.cpp:1:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/QR:17:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Householder:27:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from distributions.cpp:1:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/SVD:48:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from distributions.cpp:1:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Geometry:58:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from distributions.cpp:1:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Eigenvalues:58:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from distributions.cpp:1:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:26:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/SparseCore:66:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from distributions.cpp:1:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:27:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/OrderingMethods:71:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from distributions.cpp:1:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:29:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/SparseCholesky:43:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from distributions.cpp:1:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:32:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/SparseQR:35:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from distributions.cpp:1:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:33:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/IterativeLinearSolvers:46:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from distributions.cpp:1:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:32:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/CholmodSupport:45:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from distributions.cpp:1:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:35:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/KroneckerProduct:34:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from distributions.cpp:1:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:39:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/Polynomials:135:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from distributions.cpp:1:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:40:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/SparseExtra:51:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+17 warnings generated.
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c glm_gmrf.cpp -o glm_gmrf.o
+In file included from glm_gmrf.cpp:1:
+In file included from ./glm_gmrf.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:1:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Core:535:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from glm_gmrf.cpp:1:
+In file included from ./glm_gmrf.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:2:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/LU:47:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from glm_gmrf.cpp:1:
+In file included from ./glm_gmrf.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Cholesky:12:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Jacobi:29:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from glm_gmrf.cpp:1:
+In file included from ./glm_gmrf.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Cholesky:43:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from glm_gmrf.cpp:1:
+In file included from ./glm_gmrf.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/QR:17:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Householder:27:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from glm_gmrf.cpp:1:
+In file included from ./glm_gmrf.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/SVD:48:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from glm_gmrf.cpp:1:
+In file included from ./glm_gmrf.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Geometry:58:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from glm_gmrf.cpp:1:
+In file included from ./glm_gmrf.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Eigenvalues:58:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from glm_gmrf.cpp:1:
+In file included from ./glm_gmrf.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:26:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/SparseCore:66:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from glm_gmrf.cpp:1:
+In file included from ./glm_gmrf.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:27:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/OrderingMethods:71:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from glm_gmrf.cpp:1:
+In file included from ./glm_gmrf.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:29:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/SparseCholesky:43:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from glm_gmrf.cpp:1:
+In file included from ./glm_gmrf.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:32:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/SparseQR:35:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from glm_gmrf.cpp:1:
+In file included from ./glm_gmrf.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:33:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/IterativeLinearSolvers:46:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from glm_gmrf.cpp:1:
+In file included from ./glm_gmrf.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:32:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/CholmodSupport:45:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from glm_gmrf.cpp:1:
+In file included from ./glm_gmrf.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:35:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/KroneckerProduct:34:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from glm_gmrf.cpp:1:
+In file included from ./glm_gmrf.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:39:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/Polynomials:135:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from glm_gmrf.cpp:1:
+In file included from ./glm_gmrf.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:40:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/SparseExtra:51:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+17 warnings generated.
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c mcstat.cpp -o mcstat.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c numAlg.cpp -o numAlg.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c stpglmmod.cpp -o stpglmmod.o
+In file included from stpglmmod.cpp:9:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:1:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Core:535:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpglmmod.cpp:9:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:2:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/LU:47:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpglmmod.cpp:9:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Cholesky:12:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Jacobi:29:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpglmmod.cpp:9:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Cholesky:43:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpglmmod.cpp:9:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/QR:17:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Householder:27:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpglmmod.cpp:9:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/SVD:48:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpglmmod.cpp:9:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Geometry:58:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpglmmod.cpp:9:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Eigenvalues:58:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpglmmod.cpp:9:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:26:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/SparseCore:66:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpglmmod.cpp:9:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:27:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/OrderingMethods:71:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpglmmod.cpp:9:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:29:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/SparseCholesky:43:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpglmmod.cpp:9:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:32:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/SparseQR:35:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpglmmod.cpp:9:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:33:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/IterativeLinearSolvers:46:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpglmmod.cpp:9:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:32:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/CholmodSupport:45:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpglmmod.cpp:9:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:35:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/KroneckerProduct:34:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpglmmod.cpp:9:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:39:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/Polynomials:135:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpglmmod.cpp:9:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:40:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/SparseExtra:51:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+17 warnings generated.
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c stpmod.cpp -o stpmod.o
+In file included from stpmod.cpp:4:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:1:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Core:535:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpmod.cpp:4:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:2:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/LU:47:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpmod.cpp:4:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Cholesky:12:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Jacobi:29:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpmod.cpp:4:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Cholesky:43:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpmod.cpp:4:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/QR:17:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Householder:27:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpmod.cpp:4:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/SVD:48:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpmod.cpp:4:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Geometry:58:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpmod.cpp:4:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Eigenvalues:58:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpmod.cpp:4:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:26:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/SparseCore:66:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpmod.cpp:4:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:27:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/OrderingMethods:71:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpmod.cpp:4:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:29:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/SparseCholesky:43:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpmod.cpp:4:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:32:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/SparseQR:35:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpmod.cpp:4:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:33:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/IterativeLinearSolvers:46:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpmod.cpp:4:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:32:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/CholmodSupport:45:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpmod.cpp:4:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:35:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/KroneckerProduct:34:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpmod.cpp:4:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:39:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/Polynomials:135:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpmod.cpp:4:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:40:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/SparseExtra:51:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+stpmod.cpp:967:8: warning: unused variable 'ncats' [-Wunused-variable]
+ int ncats = cat_breaks.n_elem + 1;
+ ^
+stpmod.cpp:470:32: warning: private field 'R' is not used [-Wunused-private-field]
+ double CProposed_logdet, one, R;
+ ^
+19 warnings generated.
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c stpnotation.cpp -o stpnotation.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c svcMod.cpp -o svcMod.o
+In file included from svcMod.cpp:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:1:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Core:535:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcMod.cpp:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:2:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/LU:47:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcMod.cpp:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Cholesky:12:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Jacobi:29:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcMod.cpp:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Cholesky:43:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcMod.cpp:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/QR:17:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Householder:27:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcMod.cpp:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/SVD:48:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcMod.cpp:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Geometry:58:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcMod.cpp:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Eigenvalues:58:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcMod.cpp:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:26:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/SparseCore:66:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcMod.cpp:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:27:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/OrderingMethods:71:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcMod.cpp:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:29:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/SparseCholesky:43:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcMod.cpp:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:32:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/SparseQR:35:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcMod.cpp:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:33:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/IterativeLinearSolvers:46:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcMod.cpp:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:32:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/CholmodSupport:45:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcMod.cpp:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:35:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/KroneckerProduct:34:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcMod.cpp:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:39:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/Polynomials:135:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcMod.cpp:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:40:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/SparseExtra:51:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+17 warnings generated.
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c svcPredict.cpp -o svcPredict.o
+In file included from svcPredict.cpp:9:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:1:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Core:535:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcPredict.cpp:9:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:2:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/LU:47:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcPredict.cpp:9:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Cholesky:12:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Jacobi:29:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcPredict.cpp:9:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Cholesky:43:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcPredict.cpp:9:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/QR:17:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Householder:27:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcPredict.cpp:9:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/SVD:48:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcPredict.cpp:9:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Geometry:58:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcPredict.cpp:9:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Eigenvalues:58:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcPredict.cpp:9:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:26:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/SparseCore:66:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcPredict.cpp:9:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:27:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/OrderingMethods:71:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcPredict.cpp:9:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:29:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/SparseCholesky:43:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcPredict.cpp:9:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:32:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/SparseQR:35:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcPredict.cpp:9:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:33:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/IterativeLinearSolvers:46:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcPredict.cpp:9:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:32:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/CholmodSupport:45:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcPredict.cpp:9:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:35:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/KroneckerProduct:34:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcPredict.cpp:9:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:39:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/Polynomials:135:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcPredict.cpp:9:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:40:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/SparseExtra:51:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+17 warnings generated.
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c transformations.cpp -o transformations.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o telefit.so GibbsSampler.o RWSampler.o RcppExports.o covs.o distributions.o glm_gmrf.o mcstat.o numAlg.o stpglmmod.o stpmod.o stpnotation.o svcMod.o svcPredict.o transformations.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [telefit.so] Error 1
+ERROR: compilation failed for package ‘telefit’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/telefit/new/telefit.Rcheck/telefit’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘telefit’ ...
+** package ‘telefit’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c GibbsSampler.cpp -o GibbsSampler.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c RWSampler.cpp -o RWSampler.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o
+In file included from RcppExports.cpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:1:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Core:535:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:2:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/LU:47:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Cholesky:12:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Jacobi:29:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Cholesky:43:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/QR:17:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Householder:27:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/SVD:48:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Geometry:58:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Eigenvalues:58:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:26:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/SparseCore:66:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:27:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/OrderingMethods:71:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:29:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/SparseCholesky:43:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:32:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/SparseQR:35:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:33:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/IterativeLinearSolvers:46:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:32:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/CholmodSupport:45:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:35:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/KroneckerProduct:34:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:39:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/Polynomials:135:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:40:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/SparseExtra:51:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+17 warnings generated.
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c covs.cpp -o covs.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c distributions.cpp -o distributions.o
+In file included from distributions.cpp:1:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:1:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Core:535:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from distributions.cpp:1:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:2:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/LU:47:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from distributions.cpp:1:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Cholesky:12:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Jacobi:29:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from distributions.cpp:1:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Cholesky:43:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from distributions.cpp:1:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/QR:17:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Householder:27:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from distributions.cpp:1:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/SVD:48:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from distributions.cpp:1:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Geometry:58:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from distributions.cpp:1:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Eigenvalues:58:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from distributions.cpp:1:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:26:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/SparseCore:66:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from distributions.cpp:1:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:27:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/OrderingMethods:71:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from distributions.cpp:1:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:29:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/SparseCholesky:43:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from distributions.cpp:1:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:32:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/SparseQR:35:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from distributions.cpp:1:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:33:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/IterativeLinearSolvers:46:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from distributions.cpp:1:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:32:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/CholmodSupport:45:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from distributions.cpp:1:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:35:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/KroneckerProduct:34:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from distributions.cpp:1:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:39:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/Polynomials:135:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from distributions.cpp:1:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:40:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/SparseExtra:51:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+17 warnings generated.
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c glm_gmrf.cpp -o glm_gmrf.o
+In file included from glm_gmrf.cpp:1:
+In file included from ./glm_gmrf.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:1:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Core:535:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from glm_gmrf.cpp:1:
+In file included from ./glm_gmrf.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:2:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/LU:47:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from glm_gmrf.cpp:1:
+In file included from ./glm_gmrf.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Cholesky:12:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Jacobi:29:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from glm_gmrf.cpp:1:
+In file included from ./glm_gmrf.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Cholesky:43:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from glm_gmrf.cpp:1:
+In file included from ./glm_gmrf.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/QR:17:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Householder:27:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from glm_gmrf.cpp:1:
+In file included from ./glm_gmrf.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/SVD:48:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from glm_gmrf.cpp:1:
+In file included from ./glm_gmrf.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Geometry:58:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from glm_gmrf.cpp:1:
+In file included from ./glm_gmrf.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Eigenvalues:58:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from glm_gmrf.cpp:1:
+In file included from ./glm_gmrf.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:26:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/SparseCore:66:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from glm_gmrf.cpp:1:
+In file included from ./glm_gmrf.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:27:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/OrderingMethods:71:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from glm_gmrf.cpp:1:
+In file included from ./glm_gmrf.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:29:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/SparseCholesky:43:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from glm_gmrf.cpp:1:
+In file included from ./glm_gmrf.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:32:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/SparseQR:35:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from glm_gmrf.cpp:1:
+In file included from ./glm_gmrf.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:33:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/IterativeLinearSolvers:46:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from glm_gmrf.cpp:1:
+In file included from ./glm_gmrf.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:32:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/CholmodSupport:45:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from glm_gmrf.cpp:1:
+In file included from ./glm_gmrf.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:35:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/KroneckerProduct:34:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from glm_gmrf.cpp:1:
+In file included from ./glm_gmrf.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:39:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/Polynomials:135:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from glm_gmrf.cpp:1:
+In file included from ./glm_gmrf.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:40:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/SparseExtra:51:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+17 warnings generated.
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c mcstat.cpp -o mcstat.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c numAlg.cpp -o numAlg.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c stpglmmod.cpp -o stpglmmod.o
+In file included from stpglmmod.cpp:9:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:1:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Core:535:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpglmmod.cpp:9:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:2:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/LU:47:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpglmmod.cpp:9:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Cholesky:12:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Jacobi:29:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpglmmod.cpp:9:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Cholesky:43:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpglmmod.cpp:9:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/QR:17:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Householder:27:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpglmmod.cpp:9:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/SVD:48:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpglmmod.cpp:9:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Geometry:58:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpglmmod.cpp:9:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Eigenvalues:58:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpglmmod.cpp:9:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:26:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/SparseCore:66:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpglmmod.cpp:9:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:27:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/OrderingMethods:71:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpglmmod.cpp:9:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:29:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/SparseCholesky:43:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpglmmod.cpp:9:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:32:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/SparseQR:35:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpglmmod.cpp:9:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:33:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/IterativeLinearSolvers:46:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpglmmod.cpp:9:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:32:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/CholmodSupport:45:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpglmmod.cpp:9:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:35:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/KroneckerProduct:34:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpglmmod.cpp:9:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:39:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/Polynomials:135:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpglmmod.cpp:9:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:40:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/SparseExtra:51:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+17 warnings generated.
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c stpmod.cpp -o stpmod.o
+In file included from stpmod.cpp:4:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:1:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Core:535:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpmod.cpp:4:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:2:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/LU:47:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpmod.cpp:4:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Cholesky:12:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Jacobi:29:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpmod.cpp:4:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Cholesky:43:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpmod.cpp:4:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/QR:17:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Householder:27:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpmod.cpp:4:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/SVD:48:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpmod.cpp:4:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Geometry:58:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpmod.cpp:4:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Eigenvalues:58:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpmod.cpp:4:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:26:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/SparseCore:66:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpmod.cpp:4:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:27:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/OrderingMethods:71:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpmod.cpp:4:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:29:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/SparseCholesky:43:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpmod.cpp:4:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:32:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/SparseQR:35:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpmod.cpp:4:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:33:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/IterativeLinearSolvers:46:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpmod.cpp:4:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:32:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/CholmodSupport:45:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpmod.cpp:4:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:35:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/KroneckerProduct:34:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpmod.cpp:4:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:39:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/Polynomials:135:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from stpmod.cpp:4:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:40:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/SparseExtra:51:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+stpmod.cpp:967:8: warning: unused variable 'ncats' [-Wunused-variable]
+ int ncats = cat_breaks.n_elem + 1;
+ ^
+stpmod.cpp:470:32: warning: private field 'R' is not used [-Wunused-private-field]
+ double CProposed_logdet, one, R;
+ ^
+19 warnings generated.
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c stpnotation.cpp -o stpnotation.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c svcMod.cpp -o svcMod.o
+In file included from svcMod.cpp:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:1:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Core:535:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcMod.cpp:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:2:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/LU:47:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcMod.cpp:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Cholesky:12:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Jacobi:29:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcMod.cpp:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Cholesky:43:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcMod.cpp:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/QR:17:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Householder:27:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcMod.cpp:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/SVD:48:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcMod.cpp:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Geometry:58:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcMod.cpp:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Eigenvalues:58:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcMod.cpp:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:26:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/SparseCore:66:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcMod.cpp:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:27:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/OrderingMethods:71:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcMod.cpp:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:29:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/SparseCholesky:43:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcMod.cpp:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:32:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/SparseQR:35:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcMod.cpp:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:33:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/IterativeLinearSolvers:46:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcMod.cpp:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:32:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/CholmodSupport:45:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcMod.cpp:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:35:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/KroneckerProduct:34:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcMod.cpp:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:39:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/Polynomials:135:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcMod.cpp:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:40:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/SparseExtra:51:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+17 warnings generated.
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c svcPredict.cpp -o svcPredict.o
+In file included from svcPredict.cpp:9:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:1:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Core:535:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcPredict.cpp:9:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:2:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/LU:47:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcPredict.cpp:9:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Cholesky:12:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Jacobi:29:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcPredict.cpp:9:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Cholesky:43:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcPredict.cpp:9:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/QR:17:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Householder:27:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcPredict.cpp:9:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/SVD:48:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcPredict.cpp:9:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Geometry:58:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcPredict.cpp:9:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Dense:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Eigenvalues:58:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcPredict.cpp:9:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:26:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/SparseCore:66:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcPredict.cpp:9:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:27:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/OrderingMethods:71:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcPredict.cpp:9:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:29:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/SparseCholesky:43:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcPredict.cpp:9:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:32:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/SparseQR:35:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcPredict.cpp:9:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/Sparse:33:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/IterativeLinearSolvers:46:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcPredict.cpp:9:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:32:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/CholmodSupport:45:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcPredict.cpp:9:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:35:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/KroneckerProduct:34:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcPredict.cpp:9:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:39:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/Polynomials:135:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from svcPredict.cpp:9:
+In file included from ./distributions.h:8:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/RcppEigenForward.h:40:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/SparseExtra:51:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+17 warnings generated.
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/telefit/RcppEigen/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c transformations.cpp -o transformations.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o telefit.so GibbsSampler.o RWSampler.o RcppExports.o covs.o distributions.o glm_gmrf.o mcstat.o numAlg.o stpglmmod.o stpmod.o stpnotation.o svcMod.o svcPredict.o transformations.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [telefit.so] Error 1
+ERROR: compilation failed for package ‘telefit’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/telefit/old/telefit.Rcheck/telefit’
+
+```
+# textmining
+
+
+
+* Version: 0.0.1
+* Source code: https://github.com/cran/textmining
+* Date/Publication: 2016-09-26 00:56:23
+* Number of recursive dependencies: 91
+
+Run `revdep_details(,"textmining")` for more info
+
+
+
+## In both
+
+* checking whether package ‘textmining’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/textmining/new/textmining.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘textmining’ ...
+** package ‘textmining’ successfully unpacked and MD5 sums checked
+** using staged installation
+** R
+** byte-compile and prepare package for lazy loading
+Warning message:
+In fun(libname, pkgname) : couldn't connect to display ""
+WARNING: Initial Java 12 release has broken JNI support and does NOT work. Use stable Java 11 (or watch for 12u if avaiable).
+ERROR: Java exception occurred during rJava bootstrap - see stderr for Java stack trace.
+Exception in thread "main" java.lang.NullPointerException
+ at java.base/jdk.internal.reflect.Reflection.verifyMemberAccess(Reflection.java:130)
+ at java.base/java.lang.reflect.AccessibleObject.slowVerifyAccess(AccessibleObject.java:673)
+ at java.base/java.lang.reflect.AccessibleObject.verifyAccess(AccessibleObject.java:666)
+ at java.base/java.lang.reflect.AccessibleObject.checkAccess(AccessibleObject.java:638)
+ at java.base/java.lang.reflect.Field.checkAccess(Field.java:1075)
+ at java.base/java.lang.reflect.Field.get(Field.java:416)
+Error: .onLoad failed in loadNamespace() for 'mallet', details:
+ call: .jcheck(silent = FALSE)
+ error: java.lang.NullPointerException.jcall(f, "Ljava/lang/Object;", "get", .jcast(ic, "java/lang/Object"))new("jobjRef", jobj = , jclass = "java/lang/NullPointerException")
+Execution halted
+ERROR: lazy loading failed for package ‘textmining’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/textmining/new/textmining.Rcheck/textmining’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘textmining’ ...
+** package ‘textmining’ successfully unpacked and MD5 sums checked
+** using staged installation
+** R
+** byte-compile and prepare package for lazy loading
+Warning message:
+In fun(libname, pkgname) : couldn't connect to display ""
+WARNING: Initial Java 12 release has broken JNI support and does NOT work. Use stable Java 11 (or watch for 12u if avaiable).
+ERROR: Java exception occurred during rJava bootstrap - see stderr for Java stack trace.
+Exception in thread "main" java.lang.NullPointerException
+ at java.base/jdk.internal.reflect.Reflection.verifyMemberAccess(Reflection.java:130)
+ at java.base/java.lang.reflect.AccessibleObject.slowVerifyAccess(AccessibleObject.java:673)
+ at java.base/java.lang.reflect.AccessibleObject.verifyAccess(AccessibleObject.java:666)
+ at java.base/java.lang.reflect.AccessibleObject.checkAccess(AccessibleObject.java:638)
+ at java.base/java.lang.reflect.Field.checkAccess(Field.java:1075)
+ at java.base/java.lang.reflect.Field.get(Field.java:416)
+Error: .onLoad failed in loadNamespace() for 'mallet', details:
+ call: .jcheck(silent = FALSE)
+ error: java.lang.NullPointerException.jcall(f, "Ljava/lang/Object;", "get", .jcast(ic, "java/lang/Object"))new("jobjRef", jobj = , jclass = "java/lang/NullPointerException")
+Execution halted
+ERROR: lazy loading failed for package ‘textmining’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/textmining/old/textmining.Rcheck/textmining’
+
+```
+# vapour
+
+
+
+* Version: 0.2.0
+* Source code: https://github.com/cran/vapour
+* URL: https://github.com/hypertidy/vapour
+* BugReports: https://github.com/hypertidy/vapour/issues
+* Date/Publication: 2019-05-06 16:00:03 UTC
+* Number of recursive dependencies: 52
+
+Run `revdep_details(,"vapour")` for more info
+
+
+
+## In both
+
+* checking whether package ‘vapour’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/vapour/new/vapour.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘vapour’ ...
+** package ‘vapour’ successfully unpacked and MD5 sums checked
+** using staged installation
+configure: CC: clang
+configure: CXX: clang++ -std=gnu++11
+checking for gdal-config... no
+no
+configure: error: gdal-config not found or not executable.
+ERROR: configuration failed for package ‘vapour’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/vapour/new/vapour.Rcheck/vapour’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘vapour’ ...
+** package ‘vapour’ successfully unpacked and MD5 sums checked
+** using staged installation
+configure: CC: clang
+configure: CXX: clang++ -std=gnu++11
+checking for gdal-config... no
+no
+configure: error: gdal-config not found or not executable.
+ERROR: configuration failed for package ‘vapour’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/vapour/old/vapour.Rcheck/vapour’
+
+```
+# VarSelLCM
+
+
+
+* Version: 2.1.3
+* Source code: https://github.com/cran/VarSelLCM
+* URL: http://varsellcm.r-forge.r-project.org/
+* Date/Publication: 2018-08-29 10:24:28 UTC
+* Number of recursive dependencies: 57
+
+Run `revdep_details(,"VarSelLCM")` for more info
+
+
+
+## In both
+
+* checking whether package ‘VarSelLCM’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/VarSelLCM/new/VarSelLCM.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘VarSelLCM’ ...
+** package ‘VarSelLCM’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c Algorithm.cpp -o Algorithm.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c AlgorithmCategorical.cpp -o AlgorithmCategorical.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c AlgorithmContinuous.cpp -o AlgorithmContinuous.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c AlgorithmInteger.cpp -o AlgorithmInteger.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c AlgorithmMixed.cpp -o AlgorithmMixed.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c DataCategorical.cpp -o DataCategorical.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c DataContinuous.cpp -o DataContinuous.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c DataInteger.cpp -o DataInteger.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c DataMixed.cpp -o DataMixed.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c ParamCategorical.cpp -o ParamCategorical.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c ParamContinuous.cpp -o ParamContinuous.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c ParamInteger.cpp -o ParamInteger.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c ParamMixed.cpp -o ParamMixed.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c RcppExports.cpp -o RcppExports.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c VarSelLCMmixte.cpp -o VarSelLCMmixte.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c XEM.cpp -o XEM.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c XEMCategorical.cpp -o XEMCategorical.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c XEMContinuous.cpp -o XEMContinuous.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c XEMInteger.cpp -o XEMInteger.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c XEMMixed.cpp -o XEMMixed.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c XEMPen.cpp -o XEMPen.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o VarSelLCM.so Algorithm.o AlgorithmCategorical.o AlgorithmContinuous.o AlgorithmInteger.o AlgorithmMixed.o DataCategorical.o DataContinuous.o DataInteger.o DataMixed.o ParamCategorical.o ParamContinuous.o ParamInteger.o ParamMixed.o RcppExports.o VarSelLCMmixte.o XEM.o XEMCategorical.o XEMContinuous.o XEMInteger.o XEMMixed.o XEMPen.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [VarSelLCM.so] Error 1
+ERROR: compilation failed for package ‘VarSelLCM’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/VarSelLCM/new/VarSelLCM.Rcheck/VarSelLCM’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘VarSelLCM’ ...
+** package ‘VarSelLCM’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c Algorithm.cpp -o Algorithm.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c AlgorithmCategorical.cpp -o AlgorithmCategorical.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c AlgorithmContinuous.cpp -o AlgorithmContinuous.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c AlgorithmInteger.cpp -o AlgorithmInteger.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c AlgorithmMixed.cpp -o AlgorithmMixed.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c DataCategorical.cpp -o DataCategorical.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c DataContinuous.cpp -o DataContinuous.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c DataInteger.cpp -o DataInteger.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c DataMixed.cpp -o DataMixed.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c ParamCategorical.cpp -o ParamCategorical.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c ParamContinuous.cpp -o ParamContinuous.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c ParamInteger.cpp -o ParamInteger.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c ParamMixed.cpp -o ParamMixed.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c RcppExports.cpp -o RcppExports.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c VarSelLCMmixte.cpp -o VarSelLCMmixte.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c XEM.cpp -o XEM.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c XEMCategorical.cpp -o XEMCategorical.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c XEMContinuous.cpp -o XEMContinuous.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c XEMInteger.cpp -o XEMInteger.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c XEMMixed.cpp -o XEMMixed.o
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/VarSelLCM/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c XEMPen.cpp -o XEMPen.o
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o VarSelLCM.so Algorithm.o AlgorithmCategorical.o AlgorithmContinuous.o AlgorithmInteger.o AlgorithmMixed.o DataCategorical.o DataContinuous.o DataInteger.o DataMixed.o ParamCategorical.o ParamContinuous.o ParamInteger.o ParamMixed.o RcppExports.o VarSelLCMmixte.o XEM.o XEMCategorical.o XEMContinuous.o XEMInteger.o XEMMixed.o XEMPen.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [VarSelLCM.so] Error 1
+ERROR: compilation failed for package ‘VarSelLCM’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/VarSelLCM/old/VarSelLCM.Rcheck/VarSelLCM’
+
+```
+# vlad
+
+
+
+* Version: 0.2.0
+* Source code: https://github.com/cran/vlad
+* BugReports: https://github.com/wittenberg/vlad/issues
+* Date/Publication: 2018-12-06 08:50:03 UTC
+* Number of recursive dependencies: 55
+
+Run `revdep_details(,"vlad")` for more info
+
+
+
+## In both
+
+* checking whether package ‘vlad’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/vlad/new/vlad.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘vlad’ ...
+** package ‘vlad’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include/ -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/vlad/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/vlad/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp -fPIC -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o
+clang: error: unsupported option '-fopenmp'
+make: *** [RcppExports.o] Error 1
+ERROR: compilation failed for package ‘vlad’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/vlad/new/vlad.Rcheck/vlad’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘vlad’ ...
+** package ‘vlad’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I../inst/include/ -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/vlad/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/vlad/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp -fPIC -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o
+clang: error: unsupported option '-fopenmp'
+make: *** [RcppExports.o] Error 1
+ERROR: compilation failed for package ‘vlad’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/vlad/old/vlad.Rcheck/vlad’
+
+```
+# walker
+
+
+
+* Version: 0.2.5
+* Source code: https://github.com/cran/walker
+* URL: https://github.com/helske/walker
+* BugReports: https://github.com/helske/walker/issues
+* Date/Publication: 2019-03-04 13:50:03 UTC
+* Number of recursive dependencies: 74
+
+Run `revdep_details(,"walker")` for more info
+
+
+
+## In both
+
+* checking whether package ‘walker’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/walker/new/walker.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘walker’ ...
+** package ‘walker’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+
+
+clang++ -std=gnu++14 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/BH/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c Modules.cpp -o Modules.o
+In file included from Modules.cpp:3:
+In file included from ./include/models.hpp:18:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/rstaninc.hpp:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/stan_fit.hpp:15:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/BH/include/boost/random/additive_combine.hpp:27:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/BH/include/boost/random/linear_congruential.hpp:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/BH/include/boost/random/detail/const_mod.hpp:23:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/BH/include/boost/random/detail/large_arithmetic.hpp:19:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/BH/include/boost/random/detail/integer_log2.hpp:19:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/BH/include/boost/pending/integer_log2.hpp:7:1: warning: This header is deprecated. Use instead. [-W#pragma-messages]
+BOOST_HEADER_DEPRECATED("");
+^
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/BH/include/boost/config/header_deprecated.hpp:23:37: note: expanded from macro 'BOOST_HEADER_DEPRECATED'
+# define BOOST_HEADER_DEPRECATED(a) BOOST_PRAGMA_MESSAGE("This header is deprecated. Use " a " instead.")
+ ^
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/BH/include/boost/config/pragma_message.hpp:24:34: note: expanded from macro 'BOOST_PRAGMA_MESSAGE'
+# define BOOST_PRAGMA_MESSAGE(x) _Pragma(BOOST_STRINGIZE(message(x)))
+ ^
+:106:2: note: expanded from here
+ message("This header is deprecated. Use " "" " instead.")
+ ^
+In file included from Modules.cpp:3:
+In file included from ./include/models.hpp:18:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/rstaninc.hpp:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/stan_fit.hpp:34:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/mat.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/core.hpp:14:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/core/matrix_vari.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/mat/fun/Eigen_NumTraits.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Dense:1:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Core:535:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from Modules.cpp:3:
+In file included from ./include/models.hpp:18:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/rstaninc.hpp:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/stan_fit.hpp:34:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/mat.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/core.hpp:14:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/core/matrix_vari.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/mat/fun/Eigen_NumTraits.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Dense:2:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/LU:47:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from Modules.cpp:3:
+In file included from ./include/models.hpp:18:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/rstaninc.hpp:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/stan_fit.hpp:34:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/mat.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/core.hpp:14:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/core/matrix_vari.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/mat/fun/Eigen_NumTraits.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Dense:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Cholesky:12:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Jacobi:29:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from Modules.cpp:3:
+In file included from ./include/models.hpp:18:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/rstaninc.hpp:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/stan_fit.hpp:34:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/mat.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/core.hpp:14:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/core/matrix_vari.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/mat/fun/Eigen_NumTraits.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Dense:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Cholesky:43:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from Modules.cpp:3:
+In file included from ./include/models.hpp:18:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/rstaninc.hpp:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/stan_fit.hpp:34:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/mat.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/core.hpp:14:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/core/matrix_vari.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/mat/fun/Eigen_NumTraits.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Dense:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/QR:17:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Householder:27:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from Modules.cpp:3:
+In file included from ./include/models.hpp:18:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/rstaninc.hpp:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/stan_fit.hpp:34:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/mat.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/core.hpp:14:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/core/matrix_vari.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/mat/fun/Eigen_NumTraits.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Dense:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/SVD:48:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from Modules.cpp:3:
+In file included from ./include/models.hpp:18:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/rstaninc.hpp:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/stan_fit.hpp:34:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/mat.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/core.hpp:14:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/core/matrix_vari.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/mat/fun/Eigen_NumTraits.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Dense:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Geometry:58:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from Modules.cpp:3:
+In file included from ./include/models.hpp:18:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/rstaninc.hpp:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/stan_fit.hpp:34:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/mat.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/core.hpp:14:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/core/matrix_vari.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/mat/fun/Eigen_NumTraits.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Dense:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Eigenvalues:58:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from Modules.cpp:3:
+In file included from ./include/models.hpp:18:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/rstaninc.hpp:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/stan_fit.hpp:34:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/mat.hpp:12:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/prim/mat.hpp:96:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/prim/mat/fun/csr_extract_u.hpp:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Sparse:26:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/SparseCore:66:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from Modules.cpp:3:
+In file included from ./include/models.hpp:18:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/rstaninc.hpp:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/stan_fit.hpp:34:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/mat.hpp:12:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/prim/mat.hpp:96:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/prim/mat/fun/csr_extract_u.hpp:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Sparse:27:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/OrderingMethods:71:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from Modules.cpp:3:
+In file included from ./include/models.hpp:18:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/rstaninc.hpp:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/stan_fit.hpp:34:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/mat.hpp:12:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/prim/mat.hpp:96:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/prim/mat/fun/csr_extract_u.hpp:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Sparse:29:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/SparseCholesky:43:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from Modules.cpp:3:
+In file included from ./include/models.hpp:18:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/rstaninc.hpp:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/stan_fit.hpp:34:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/mat.hpp:12:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/prim/mat.hpp:96:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/prim/mat/fun/csr_extract_u.hpp:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Sparse:32:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/SparseQR:35:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from Modules.cpp:3:
+In file included from ./include/models.hpp:18:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/rstaninc.hpp:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/stan_fit.hpp:34:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/mat.hpp:12:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/prim/mat.hpp:96:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/prim/mat/fun/csr_extract_u.hpp:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Sparse:33:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/IterativeLinearSolvers:46:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from Modules.cpp:3:
+In file included from ./include/models.hpp:18:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/rstaninc.hpp:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/stan_fit.hpp:34:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/mat.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/core.hpp:44:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/core/set_zero_all_adjoints.hpp:14:13: warning: unused function 'set_zero_all_adjoints' [-Wunused-function]
+static void set_zero_all_adjoints() {
+ ^
+In file included from Modules.cpp:3:
+In file included from ./include/models.hpp:18:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/rstaninc.hpp:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/stan_fit.hpp:34:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/mat.hpp:12:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/prim/mat.hpp:70:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/prim/mat/fun/autocorrelation.hpp:18:8: warning: function 'fft_next_good_size' is not needed and will not be emitted [-Wunneeded-internal-declaration]
+size_t fft_next_good_size(size_t N) {
+ ^
+16 warnings generated.
+
+
+clang++ -std=gnu++14 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/BH/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o
+In file included from RcppExports.cpp:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Dense:1:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Core:535:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Dense:2:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/LU:47:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Dense:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Cholesky:12:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Jacobi:29:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Dense:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Cholesky:43:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Dense:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/QR:17:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Householder:27:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Dense:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/SVD:48:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Dense:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Geometry:58:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Dense:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Eigenvalues:58:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Sparse:26:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/SparseCore:66:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Sparse:27:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/OrderingMethods:71:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Sparse:29:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/SparseCholesky:43:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Sparse:32:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/SparseQR:35:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Sparse:33:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/IterativeLinearSolvers:46:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigenForward.h:32:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/CholmodSupport:45:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigenForward.h:35:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/unsupported/Eigen/KroneckerProduct:34:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigenForward.h:39:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/unsupported/Eigen/Polynomials:135:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigenForward.h:40:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/unsupported/Eigen/SparseExtra:51:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+17 warnings generated.
+
+
+clang++ -std=gnu++14 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/BH/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c predict.cpp -o predict.o
+clang++ -std=gnu++14 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o walker.so Modules.o RcppExports.o predict.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [walker.so] Error 1
+ERROR: compilation failed for package ‘walker’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/walker/new/walker.Rcheck/walker’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘walker’ ...
+** package ‘walker’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+
+
+clang++ -std=gnu++14 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/BH/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c Modules.cpp -o Modules.o
+In file included from Modules.cpp:3:
+In file included from ./include/models.hpp:18:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/rstaninc.hpp:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/stan_fit.hpp:15:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/BH/include/boost/random/additive_combine.hpp:27:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/BH/include/boost/random/linear_congruential.hpp:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/BH/include/boost/random/detail/const_mod.hpp:23:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/BH/include/boost/random/detail/large_arithmetic.hpp:19:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/BH/include/boost/random/detail/integer_log2.hpp:19:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/BH/include/boost/pending/integer_log2.hpp:7:1: warning: This header is deprecated. Use instead. [-W#pragma-messages]
+BOOST_HEADER_DEPRECATED("");
+^
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/BH/include/boost/config/header_deprecated.hpp:23:37: note: expanded from macro 'BOOST_HEADER_DEPRECATED'
+# define BOOST_HEADER_DEPRECATED(a) BOOST_PRAGMA_MESSAGE("This header is deprecated. Use " a " instead.")
+ ^
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/BH/include/boost/config/pragma_message.hpp:24:34: note: expanded from macro 'BOOST_PRAGMA_MESSAGE'
+# define BOOST_PRAGMA_MESSAGE(x) _Pragma(BOOST_STRINGIZE(message(x)))
+ ^
+:106:2: note: expanded from here
+ message("This header is deprecated. Use " "" " instead.")
+ ^
+In file included from Modules.cpp:3:
+In file included from ./include/models.hpp:18:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/rstaninc.hpp:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/stan_fit.hpp:34:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/mat.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/core.hpp:14:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/core/matrix_vari.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/mat/fun/Eigen_NumTraits.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Dense:1:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Core:535:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from Modules.cpp:3:
+In file included from ./include/models.hpp:18:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/rstaninc.hpp:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/stan_fit.hpp:34:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/mat.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/core.hpp:14:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/core/matrix_vari.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/mat/fun/Eigen_NumTraits.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Dense:2:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/LU:47:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from Modules.cpp:3:
+In file included from ./include/models.hpp:18:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/rstaninc.hpp:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/stan_fit.hpp:34:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/mat.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/core.hpp:14:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/core/matrix_vari.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/mat/fun/Eigen_NumTraits.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Dense:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Cholesky:12:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Jacobi:29:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from Modules.cpp:3:
+In file included from ./include/models.hpp:18:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/rstaninc.hpp:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/stan_fit.hpp:34:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/mat.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/core.hpp:14:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/core/matrix_vari.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/mat/fun/Eigen_NumTraits.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Dense:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Cholesky:43:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from Modules.cpp:3:
+In file included from ./include/models.hpp:18:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/rstaninc.hpp:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/stan_fit.hpp:34:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/mat.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/core.hpp:14:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/core/matrix_vari.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/mat/fun/Eigen_NumTraits.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Dense:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/QR:17:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Householder:27:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from Modules.cpp:3:
+In file included from ./include/models.hpp:18:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/rstaninc.hpp:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/stan_fit.hpp:34:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/mat.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/core.hpp:14:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/core/matrix_vari.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/mat/fun/Eigen_NumTraits.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Dense:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/SVD:48:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from Modules.cpp:3:
+In file included from ./include/models.hpp:18:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/rstaninc.hpp:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/stan_fit.hpp:34:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/mat.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/core.hpp:14:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/core/matrix_vari.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/mat/fun/Eigen_NumTraits.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Dense:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Geometry:58:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from Modules.cpp:3:
+In file included from ./include/models.hpp:18:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/rstaninc.hpp:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/stan_fit.hpp:34:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/mat.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/core.hpp:14:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/core/matrix_vari.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/mat/fun/Eigen_NumTraits.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Dense:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Eigenvalues:58:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from Modules.cpp:3:
+In file included from ./include/models.hpp:18:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/rstaninc.hpp:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/stan_fit.hpp:34:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/mat.hpp:12:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/prim/mat.hpp:96:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/prim/mat/fun/csr_extract_u.hpp:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Sparse:26:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/SparseCore:66:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from Modules.cpp:3:
+In file included from ./include/models.hpp:18:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/rstaninc.hpp:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/stan_fit.hpp:34:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/mat.hpp:12:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/prim/mat.hpp:96:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/prim/mat/fun/csr_extract_u.hpp:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Sparse:27:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/OrderingMethods:71:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from Modules.cpp:3:
+In file included from ./include/models.hpp:18:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/rstaninc.hpp:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/stan_fit.hpp:34:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/mat.hpp:12:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/prim/mat.hpp:96:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/prim/mat/fun/csr_extract_u.hpp:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Sparse:29:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/SparseCholesky:43:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from Modules.cpp:3:
+In file included from ./include/models.hpp:18:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/rstaninc.hpp:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/stan_fit.hpp:34:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/mat.hpp:12:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/prim/mat.hpp:96:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/prim/mat/fun/csr_extract_u.hpp:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Sparse:32:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/SparseQR:35:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from Modules.cpp:3:
+In file included from ./include/models.hpp:18:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/rstaninc.hpp:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/stan_fit.hpp:34:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/mat.hpp:12:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/prim/mat.hpp:96:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/prim/mat/fun/csr_extract_u.hpp:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Sparse:33:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/IterativeLinearSolvers:46:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from Modules.cpp:3:
+In file included from ./include/models.hpp:18:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/rstaninc.hpp:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/stan_fit.hpp:34:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/mat.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/core.hpp:44:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/core/set_zero_all_adjoints.hpp:14:13: warning: unused function 'set_zero_all_adjoints' [-Wunused-function]
+static void set_zero_all_adjoints() {
+ ^
+In file included from Modules.cpp:3:
+In file included from ./include/models.hpp:18:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/rstaninc.hpp:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include/rstan/stan_fit.hpp:34:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/services/diagnose/diagnose.hpp:10:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/model/test_gradients.hpp:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src/stan/model/log_prob_grad.hpp:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/rev/mat.hpp:12:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/prim/mat.hpp:70:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/stan/math/prim/mat/fun/autocorrelation.hpp:18:8: warning: function 'fft_next_good_size' is not needed and will not be emitted [-Wunneeded-internal-declaration]
+size_t fft_next_good_size(size_t N) {
+ ^
+16 warnings generated.
+
+
+clang++ -std=gnu++14 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/BH/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o
+In file included from RcppExports.cpp:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Dense:1:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Core:535:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Dense:2:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/LU:47:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Dense:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Cholesky:12:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Jacobi:29:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Dense:3:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Cholesky:43:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Dense:4:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/QR:17:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Householder:27:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Dense:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/SVD:48:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Dense:6:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Geometry:58:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigenForward.h:30:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Dense:7:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Eigenvalues:58:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Sparse:26:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/SparseCore:66:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Sparse:27:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/OrderingMethods:71:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Sparse:29:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/SparseCholesky:43:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Sparse:32:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/SparseQR:35:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigenForward.h:31:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/Sparse:33:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/IterativeLinearSolvers:46:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigenForward.h:32:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/CholmodSupport:45:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigenForward.h:35:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/unsupported/Eigen/KroneckerProduct:34:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigenForward.h:39:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/unsupported/Eigen/Polynomials:135:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+In file included from RcppExports.cpp:5:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigen.h:25:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/RcppEigenForward.h:40:
+In file included from /Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/unsupported/Eigen/SparseExtra:51:
+/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include/unsupported/Eigen/../../Eigen/src/Core/util/ReenableStupidWarnings.h:10:30: warning: pragma diagnostic pop could not pop, no matching push [-Wunknown-pragmas]
+ #pragma clang diagnostic pop
+ ^
+17 warnings generated.
+
+
+clang++ -std=gnu++14 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include/src" -DBOOST_DISABLE_ASSERTS -DEIGEN_NO_DEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/StanHeaders/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/rstan/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/BH/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppArmadillo/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/walker/RcppEigen/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wall -g -O2 -c predict.cpp -o predict.o
+clang++ -std=gnu++14 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o walker.so Modules.o RcppExports.o predict.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0 -L/usr/local/gfortran/lib -lgfortran -lquadmath -lm -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin15/6.1.0'
+ld: warning: directory not found for option '-L/usr/local/gfortran/lib'
+ld: library not found for -lgfortran
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [walker.so] Error 1
+ERROR: compilation failed for package ‘walker’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/walker/old/walker.Rcheck/walker’
+
+```
+# wand
+
+
+
+* Version: 0.2.0
+* Source code: https://github.com/cran/wand
+* URL: http://github.com/hrbrmstr/wand
+* BugReports: https://github.com/hrbrmstr/wand/issues
+* Date/Publication: 2016-08-16 02:08:24
+* Number of recursive dependencies: 25
+
+Run `revdep_details(,"wand")` for more info
+
+
+
+## In both
+
+* checking whether package ‘wand’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/wand/new/wand.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘wand’ ...
+** package ‘wand’ successfully unpacked and MD5 sums checked
+** using staged installation
+Checking to see if libmagic is available...
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -L/usr/local/include -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/wand/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c RcppExports.cpp -o RcppExports.o
+clang: warning: argument unused during compilation: '-L/usr/local/include' [-Wunused-command-line-argument]
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -L/usr/local/include -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/wand/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c wand.cpp -o wand.o
+clang: warning: argument unused during compilation: '-L/usr/local/include' [-Wunused-command-line-argument]
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o wand.so RcppExports.o wand.o -L/usr/local/lib -L/usr/lib -lmagic -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: library not found for -lmagic
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [wand.so] Error 1
+ERROR: compilation failed for package ‘wand’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/wand/new/wand.Rcheck/wand’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘wand’ ...
+** package ‘wand’ successfully unpacked and MD5 sums checked
+** using staged installation
+Checking to see if libmagic is available...
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -L/usr/local/include -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/wand/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c RcppExports.cpp -o RcppExports.o
+clang: warning: argument unused during compilation: '-L/usr/local/include' [-Wunused-command-line-argument]
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -L/usr/local/include -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/wand/Rcpp/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fPIC -Wno-c++11-inline-namespace -c wand.cpp -o wand.o
+clang: warning: argument unused during compilation: '-L/usr/local/include' [-Wunused-command-line-argument]
+clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o wand.so RcppExports.o wand.o -L/usr/local/lib -L/usr/lib -lmagic -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
+ld: library not found for -lmagic
+clang: error: linker command failed with exit code 1 (use -v to see invocation)
+make: *** [wand.so] Error 1
+ERROR: compilation failed for package ‘wand’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/wand/old/wand.Rcheck/wand’
+
+```
+# weibulltools
+
+
+
+* Version: 1.0.1
+* Source code: https://github.com/cran/weibulltools
+* Date/Publication: 2019-01-29 16:10:03 UTC
+* Number of recursive dependencies: 103
+
+Run `revdep_details(,"weibulltools")` for more info
+
+
+
+## In both
+
+* checking whether package ‘weibulltools’ can be installed ... ERROR
+ ```
+ Installation failed.
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/weibulltools/new/weibulltools.Rcheck/00install.out’ for details.
+ ```
+
+## Installation
+
+### Devel
+
+```
+* installing *source* package ‘weibulltools’ ...
+** package ‘weibulltools’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/weibulltools/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/weibulltools/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp -fPIC -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o
+clang: error: unsupported option '-fopenmp'
+make: *** [RcppExports.o] Error 1
+ERROR: compilation failed for package ‘weibulltools’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/weibulltools/new/weibulltools.Rcheck/weibulltools’
+
+```
+### CRAN
+
+```
+* installing *source* package ‘weibulltools’ ...
+** package ‘weibulltools’ successfully unpacked and MD5 sums checked
+** using staged installation
+** libs
+clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/weibulltools/Rcpp/include" -I"/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/library.noindex/weibulltools/RcppArmadillo/include" -isysroot /Library/Developer/CommandLineTools/SDKs/MacOSX.sdk -I/usr/local/include -fopenmp -fPIC -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o
+clang: error: unsupported option '-fopenmp'
+make: *** [RcppExports.o] Error 1
+ERROR: compilation failed for package ‘weibulltools’
+* removing ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/weibulltools/old/weibulltools.Rcheck/weibulltools’
+
+```
+# XBSeq
+
+
+
+* Version: 1.14.1
+* Source code: https://github.com/cran/XBSeq
+* URL: https://github.com/Liuy12/XBSeq
+* Date/Publication: 2019-01-04
+* Number of recursive dependencies: 115
+
+Run `revdep_details(,"XBSeq")` for more info
+
+
+
+## In both
+
+* R CMD check timed out
+
+
+* checking whether the namespace can be loaded with stated dependencies ... NOTE
+ ```
+ Warning: no function found corresponding to methods exports from ‘XBSeq’ for: ‘conditions’, ‘conditions<-’, ‘dispTable’
+
+ A namespace must be able to be loaded with just the base namespace
+ loaded: otherwise if the namespace gets loaded by a saved object, the
+ session will be unable to start.
+
+ Probably some imports need to be declared in the NAMESPACE file.
+ ```
+
+* checking R code for possible problems ... NOTE
+ ```
+ ...
+ estimateRealCount,XBSeqDataSet: no visible global function definition
+ for ‘assay’
+ estimateRealCount,XBSeqDataSet: no visible global function definition
+ for ‘assay<-’
+ estimateSCV,XBSeqDataSet: no visible global function definition for
+ ‘conditions’
+ estimateSCV,XBSeqDataSet: no visible global function definition for
+ ‘dispTable<-’
+ Undefined global functions or variables:
+ ..count.. DataFrame Gamma Group Sample SummarizedExperiment assay
+ assay<- assays baseMean coefficients complete.cases conditions cor
+ data ddelap dispTable dispTable<- dnbinom dpois formula glm
+ log2FoldChange median optim p.adjust pbeta predict qbeta quantile
+ rnbinom scvBiasCorrectionFits
+ Consider adding
+ importFrom("stats", "Gamma", "coefficients", "complete.cases", "cor",
+ "dnbinom", "dpois", "formula", "glm", "median", "optim",
+ "p.adjust", "pbeta", "predict", "qbeta", "quantile",
+ "rnbinom")
+ importFrom("utils", "data")
+ to your NAMESPACE file.
+ ```
+
diff --git a/revdep/problems.md b/revdep/problems.md
index d10312b3fa..78c9de6bfd 100644
--- a/revdep/problems.md
+++ b/revdep/problems.md
@@ -1,58 +1,85 @@
-# banR
+# benthos
-Version: 0.2.0
+
+
+* Version: 1.3-6
+* Source code: https://github.com/cran/benthos
+* Date/Publication: 2019-03-17 22:43:20 UTC
+* Number of recursive dependencies: 56
+
+Run `revdep_details(,"benthos")` for more info
+
+
## Newly broken
-* checking examples ... ERROR
+* checking whether package ‘benthos’ can be installed ... WARNING
```
- ...
- > ### Name: geocode_tbl
- > ### Title: Geocode tbl
- > ### Aliases: geocode_tbl
- >
- > ### ** Examples
- >
- >
- > table_test <- tibble::tibble(
- + x = c("39 quai Andre Citroen", "64 Allee de Bercy", "20 avenue de Segur"),
- + y = c("75015", "75012", "75007"),
- + z = rnorm(3)
- + )
- >
- > geocode_tbl(tbl = table_test, adresse = x)
- Writing tempfile to.../var/folders/4b/hn4fq98s6810s4ccv2f9hm2h0000gn/T//RtmpLabKmK/file8ed277e80d06.csv
- If file is larger than 8 MB, it must be splitted
- Size is : 61 bytes
- Server errorService UnavailableServer error: (503) Service Unavailable
- Error in geocode_tbl(tbl = table_test, adresse = x) :
- The API sent back an error 503
- Execution halted
+ Found the following significant warnings:
+ Warning: replacing previous import ‘dplyr::as_name’ by ‘lazyeval::as_name’ when loading ‘benthos’
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/benthos/new/benthos.Rcheck/00install.out’ for details.
```
-## Newly fixed
+# bomrang
+
+
+
+* Version: 0.5.0
+* Source code: https://github.com/cran/bomrang
+* URL: https://github.com/ropensci/bomrang, https://ropensci.github.io/bomrang/
+* BugReports: https://github.com/ropensci/bomrang/issues
+* Date/Publication: 2019-03-21 12:13:23 UTC
+* Number of recursive dependencies: 104
+
+Run `revdep_details(,"bomrang")` for more info
+
+
+
+## Newly broken
-* checking re-building of vignette outputs ... WARNING
+* checking whether package ‘bomrang’ can be installed ... WARNING
```
- Error in re-building vignettes:
- ...
- Quitting from lines 47-49 (geocode.Rmd)
- Erreur : le traitement de la vignette 'geocode.Rmd' a échoué avec le diagnostic :
- The API sent back an error 503
- Exécution arrêtée
+ Found the following significant warnings:
+ Warning: replacing previous import ‘dplyr:::=’ by ‘data.table:::=’ when loading ‘bomrang’
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/bomrang/new/bomrang.Rcheck/00install.out’ for details.
```
-## In both
+# bupaR
-* checking dependencies in R code ... NOTE
+
+
+* Version: 0.4.2
+* Source code: https://github.com/cran/bupaR
+* URL: https://www.bupar.net
+* Date/Publication: 2019-02-19 11:40:03 UTC
+* Number of recursive dependencies: 38
+
+Run `revdep_details(,"bupaR")` for more info
+
+
+
+## Newly broken
+
+* checking whether package ‘bupaR’ can be installed ... WARNING
```
- Namespace in Imports field not imported from: ‘stringr’
- All declared Imports should be used.
+ Found the following significant warnings:
+ Warning: replacing previous import ‘dplyr:::=’ by ‘data.table:::=’ when loading ‘bupaR’
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/bupaR/new/bupaR.Rcheck/00install.out’ for details.
```
# Cardinal
-Version: 2.0.4
+
+
+* Version: 2.0.4
+* Source code: https://github.com/cran/Cardinal
+* URL: http://www.cardinalmsi.org
+* Date/Publication: 2019-02-21
+* Number of recursive dependencies: 68
+
+Run `revdep_details(,"Cardinal")` for more info
+
+
## Newly broken
@@ -79,13 +106,23 @@ Version: 2.0.4
```
installed size is 6.0Mb
sub-directories of 1Mb or more:
- R 3.0Mb
+ R 3.1Mb
doc 2.2Mb
```
# CluMP
-Version: 0.7.1
+
+
+* Version: 0.7.1
+* Source code: https://github.com/cran/CluMP
+* URL: https://arxiv.org/ftp/arxiv/papers/1807/1807.05926.pdf
+* Date/Publication: 2019-04-05 09:42:55 UTC
+* Number of recursive dependencies: 77
+
+Run `revdep_details(,"CluMP")` for more info
+
+
## Newly broken
@@ -117,7 +154,16 @@ Version: 0.7.1
# compareDF
-Version: 1.7.2
+
+
+* Version: 1.7.2
+* Source code: https://github.com/cran/compareDF
+* Date/Publication: 2019-04-02 10:30:03 UTC
+* Number of recursive dependencies: 39
+
+Run `revdep_details(,"compareDF")` for more info
+
+
## Newly broken
@@ -135,7 +181,7 @@ Version: 1.7.2
Incompatible type for column `changes`: x numeric, y integer
══ testthat results ═══════════════════════════════════════════════════════════
- OK: 48 SKIPPED: 0 FAILED: 1
+ OK: 48 SKIPPED: 0 WARNINGS: 0 FAILED: 1
1. Failure: (unknown) (@test-fnsComparison.R#369)
Error: testthat unit tests failed
@@ -151,220 +197,189 @@ Version: 1.7.2
All declared Imports should be used.
```
-# corrr
+# edeaR
-Version: 0.3.1
+
-## Newly broken
+* Version: 0.8.2
+* Source code: https://github.com/cran/edeaR
+* URL: https://www.bupar.net
+* BugReports: https://github.com/gertjanssenswillen/edeaR/issues
+* Date/Publication: 2019-02-22 14:40:13 UTC
+* Number of recursive dependencies: 68
-* checking re-building of vignette outputs ... WARNING
- ```
- Error in re-building vignettes:
- ...
- Quitting from lines 39-44 (corrr-databases.Rmd)
- Erreur : le traitement de la vignette 'corrr-databases.Rmd' a échoué avec le diagnostic :
- objet 'mpg' introuvable
- Exécution arrêtée
- ```
+Run `revdep_details(,"edeaR")` for more info
-# cytominer
-
-Version: 0.1.0
+
## Newly broken
-* checking tests ...
+* checking whether package ‘edeaR’ can be installed ... WARNING
```
- ERROR
- Running the tests in ‘tests/testthat.R’ failed.
- Last 13 lines of output:
- base::pairlist(...)
- `_quo` <- rlang::quo(eval_tidy(~mean(.)))
- rlang::eval_bare(`_quo`, base::parent.frame())
- }, class = "inline_colwise_function", formula = ~mean(.)))(x)
- 34: base::pairlist(...) at /Users/romainfrancois/git/tidyverse/dplyr/R/colwise.R:238
- 35: as.pairlist(list(...))
-
- ══ testthat results ═══════════════════════════════════════════════════════════
- OK: 28 SKIPPED: 0 FAILED: 3
- 1. Error: `aggregate` aggregates data (@test-aggregate.R#37)
- 2. Error: cytominer can process dataset with a normalized schema (@test-cytominer.R#71)
- 3. Error: `normalize' normalizes data (@test-normalize.R#49)
-
- Error: testthat unit tests failed
- Execution halted
+ Found the following significant warnings:
+ Warning: replacing previous import ‘dplyr:::=’ by ‘data.table:::=’ when loading ‘edeaR’
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/edeaR/new/edeaR.Rcheck/00install.out’ for details.
```
-# dbplyr
+# heuristicsmineR
-Version: 1.3.0
+
-## Newly broken
+* Version: 0.2.0
+* Source code: https://github.com/cran/heuristicsmineR
+* URL: https://github.com/fmannhardt/heuristicsmineR
+* BugReports: https://github.com/fmannhardt/heuristicsmineR/issues
+* Date/Publication: 2019-05-02 08:20:04 UTC
+* Number of recursive dependencies: 92
-* checking tests ...
- ```
- ERROR
- Running the tests in ‘tests/testthat.R’ failed.
- Last 13 lines of output:
- 13: eval_bare(call, env)
-
- Error in connection_create(host, username, password, dbname, as.integer(port), :
- Failed to connect: Can't connect to local MySQL server through socket '/tmp/mysql.sock' (2)
- Calls: ... -> -> .local -> connection_create
- In addition: Warning message:
- In dbDisconnect(con) : restarting interrupted promise evaluation
- ══ testthat results ═══════════════════════════════════════════════════════════
- OK: 565 SKIPPED: 11 FAILED: 1
- 1. Error: tbl_dbi support colwise variants (@test-colwise.R#13)
-
- Error: testthat unit tests failed
- In addition: Warning message:
- call dbDisconnect() when finished working with a connection
- Execution halted
- ```
-
-# FindMyFriends
+Run `revdep_details(,"heuristicsmineR")` for more info
-Version: 1.12.0
-
-## In both
+
-* R CMD check timed out
-
+## Newly broken
-* checking for code/documentation mismatches ... WARNING
+* checking whether package ‘heuristicsmineR’ can be installed ... WARNING
```
- Functions or methods with usage in documentation object 'pgVirtual-class' but not in code:
- as
+ Found the following significant warnings:
+ Warning: replacing previous import ‘dplyr:::=’ by ‘data.table:::=’ when loading ‘heuristicsmineR’
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/heuristicsmineR/new/heuristicsmineR.Rcheck/00install.out’ for details.
```
-* checking installed package size ... NOTE
- ```
- installed size is 5.8Mb
- sub-directories of 1Mb or more:
- R 1.0Mb
- doc 1.5Mb
- extdata 1.8Mb
- libs 1.2Mb
- ```
+## In both
* checking dependencies in R code ... NOTE
```
- Unexported objects imported by ':::' calls:
- ‘gtable:::insert.unit’ ‘gtable:::z_arrange_gtables’
- See the note in ?`:::` about the use of this operator.
+ Namespaces in Imports field not imported from:
+ ‘Rcpp11’ ‘magrittr’
+ All declared Imports should be used.
```
-# GEOmetadb
+# IAT
-Version: 1.44.0
+
-## In both
+* Version: 0.3
+* Source code: https://github.com/cran/IAT
+* Date/Publication: 2016-04-30 00:51:43
+* Number of recursive dependencies: 38
-* R CMD check timed out
-
+Run `revdep_details(,"IAT")` for more info
-* checking for hidden files and directories ... NOTE
- ```
- Found the following hidden files and directories:
- .travis.yml
- These were most likely included in error. See section ‘Package
- structure’ in the ‘Writing R Extensions’ manual.
- ```
+
-* checking R code for possible problems ... NOTE
+## Newly broken
+
+* checking whether package ‘IAT’ can be installed ... WARNING
```
- getSQLiteFile: no visible global function definition for
- ‘download.file’
- Undefined global functions or variables:
- download.file
- Consider adding
- importFrom("utils", "download.file")
- to your NAMESPACE file.
+ Found the following significant warnings:
+ Warning: replacing previous import ‘dplyr::as_name’ by ‘lazyeval::as_name’ when loading ‘IAT’
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/IAT/new/IAT.Rcheck/00install.out’ for details.
```
-# grasp2db
+# idealstan
-Version: 1.1.0
+
-## In both
+* Version: 0.7.1
+* Source code: https://github.com/cran/idealstan
+* BugReports: https://github.com/saudiwin/idealstan/issues
+* Date/Publication: 2019-02-19 21:40:09 UTC
+* Number of recursive dependencies: 103
-* R CMD check timed out
-
+Run `revdep_details(,"idealstan")` for more info
-* checking for missing documentation entries ... WARNING
- ```
- Undocumented code objects:
- ‘GRASP2’ ‘checkAnti’ ‘getJoinCompatible’
- Undocumented data sets:
- ‘mml10p_nox’ ‘uniqueGexNames2.0’ ‘uniquePPDnames2.0’
- All user-level objects in a package should have documentation entries.
- See chapter ‘Writing R documentation files’ in the ‘Writing R
- Extensions’ manual.
- ```
+
-* checking data for non-ASCII characters ... WARNING
- ```
- Warning: found non-ASCII string
- 'Behet's disease' in object 'uniquePPDnames2.0'
- ```
+## Newly broken
-* checking data for ASCII and uncompressed saves ... WARNING
+* checking whether package ‘idealstan’ can be installed ... WARNING
```
-
- Note: significantly better compression could be obtained
- by using R CMD build --resave-data
- old_size new_size compress
- mml10p_nox.rda 7.1Mb 2.8Mb xz
- uniquePPDnames2.0.rda 17Kb 15Kb bzip2
+ Found the following significant warnings:
+ Warning: replacing previous import ‘dplyr::as_name’ by ‘lazyeval::as_name’ when loading ‘idealstan’
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/idealstan/new/idealstan.Rcheck/00install.out’ for details.
```
-* checking package dependencies ... NOTE
- ```
- Package which this enhances but not available for checking: ‘AnnotationHubData’
- ```
+## In both
* checking installed package size ... NOTE
```
- installed size is 7.6Mb
+ installed size is 6.1Mb
sub-directories of 1Mb or more:
- data 7.1Mb
+ libs 5.0Mb
```
-* checking DESCRIPTION meta-information ... NOTE
+* checking for GNU extensions in Makefiles ... NOTE
```
- License components with restrictions not permitted:
- Artistic-2.0 + file LICENSE
+ GNU make is a SystemRequirements.
```
-* checking R code for possible problems ... NOTE
- ```
- .grasp2ToAnnotationHub: no visible global function definition for
- ‘outputFile’
- checkAnti: no visible binding for global variable ‘chr_hg19’
- getJoinCompatible: no visible binding for global variable ‘gwrngs19’
- Undefined global functions or variables:
- chr_hg19 gwrngs19 outputFile
- ```
+# INDperform
+
+
-# HTSSIP
+* Version: 0.2.0
+* Source code: https://github.com/cran/INDperform
+* URL: https://github.com/saskiaotto/INDperform
+* BugReports: https://github.com/SaskiaAOtto/INDperform/issues
+* Date/Publication: 2019-02-10 03:53:24 UTC
+* Number of recursive dependencies: 70
-Version: 1.4.0
+Run `revdep_details(,"INDperform")` for more info
+
+
+
+## Newly broken
+
+* checking installed package size ... NOTE
+ ```
+ installed size is 5.0Mb
+ sub-directories of 1Mb or more:
+ data 3.5Mb
+ help 1.1Mb
+ ```
## In both
-* R CMD check timed out
-
+* checking tests ...
+ ```
+ ERROR
+ Running the tests in ‘tests/testthat.R’ failed.
+ Last 13 lines of output:
+ The conditions set in the crit_scores table for sub-criterion
+ C9_1
+ are not unique, i.e. conditions are met multiple times!
+ Please correct your crit_score table before you continue. variable required_data_type
+ 1 edf numeric
+ variable required_data_type
+ 1 r_sq numeric
+ ══ testthat results ═══════════════════════════════════════════════════════════
+ OK: 618 SKIPPED: 0 WARNINGS: 12 FAILED: 3
+ 1. Failure: check gams under different distributions (@test_calc_deriv.R#82)
+ 2. Failure: test sample_boot (@test_cond_boot.R#69)
+ 3. Failure: test sample_boot (@test_cond_boot.R#70)
+
+ Error: testthat unit tests failed
+ Execution halted
+ ```
* checking dependencies in R code ... NOTE
```
- Namespace in Imports field not imported from: ‘igraph’
+ Namespace in Imports field not imported from: ‘lazyeval’
All declared Imports should be used.
```
# InjurySeverityScore
-Version: 0.0.0.1
+
+
+* Version: 0.0.0.1
+* Source code: https://github.com/cran/InjurySeverityScore
+* Date/Publication: 2018-03-28 08:26:07 UTC
+* Number of recursive dependencies: 20
+
+Run `revdep_details(,"InjurySeverityScore")` for more info
+
+
## Newly broken
@@ -388,117 +403,214 @@ Version: 0.0.0.1
1. └─InjurySeverityScore::injury_score(sample_data, subj, code)
2. ├─base::cbind(...)
3. └─dplyr::coalesce(iss_br$max_wo_9, iss_br$max_w_9, iss_br$severity_default)
- 4. └─dplyr:::replace_with(...) /Users/romainfrancois/git/tidyverse/dplyr/R/coalesce.R:42:4
- 5. └─dplyr:::check_type(val, x, name) /Users/romainfrancois/git/tidyverse/dplyr/R/utils-replace-with.R:7:2
- 6. └─dplyr:::glubort(header, "must be {friendly_type_of(template)}, not {friendly_type_of(x)}") /Users/romainfrancois/git/tidyverse/dplyr/R/utils-replace-with.R:52:2
+ 4. └─dplyr:::replace_with(...)
+ 5. └─dplyr:::check_type(val, x, name)
+ 6. └─dplyr:::glubort(header, "must be {friendly_type_of(template)}, not {friendly_type_of(x)}")
Execution halted
```
-# IrisSpatialFeatures
+# lans2r
-Version: 1.3.0
+
-## In both
+* Version: 1.0.5
+* Source code: https://github.com/cran/lans2r
+* URL: https://github.com/KopfLab/lans2r
+* BugReports: https://github.com/KopfLab/lans2r/issues
+* Date/Publication: 2017-05-24 04:25:53 UTC
+* Number of recursive dependencies: 64
-* R CMD check timed out
-
-
-# modeldb
+Run `revdep_details(,"lans2r")` for more info
-Version: 0.1.2
+
## Newly broken
-* checking re-building of vignette outputs ... WARNING
+* checking whether package ‘lans2r’ can be installed ... WARNING
```
- Error in re-building vignettes:
- ...
- Quitting from lines 45-49 (kmeans.Rmd)
- Erreur : le traitement de la vignette 'kmeans.Rmd' a échoué avec le diagnostic :
- objet 'dep_time' introuvable
- Exécution arrêtée
+ Found the following significant warnings:
+ Warning: replacing previous import ‘dplyr::as_name’ by ‘lazyeval::as_name’ when loading ‘lans2r’
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/lans2r/new/lans2r.Rcheck/00install.out’ for details.
```
# MonetDBLite
-Version: 0.6.0
+
-## In both
+* Version: 0.6.0
+* Source code: https://github.com/cran/MonetDBLite
+* URL: https://github.com/hannesmuehleisen/MonetDBLite-R
+* BugReports: https://github.com/hannesmuehleisen/MonetDBLite-R/issues
+* Date/Publication: 2018-07-27 09:40:03 UTC
+* Number of recursive dependencies: 73
+
+Run `revdep_details(,"MonetDBLite")` for more info
+
+
+
+## Newly broken
* R CMD check timed out
+## Newly fixed
+
+* checking tests ...
+ ```
+ ERROR
+ Running the tests in ‘tests/testthat.R’ failed.
+ Last 13 lines of output:
+ round(confint(a, df = degf(rclus1))[2, 2], 2) not equal to 30808.26.
+ 1/1 mismatches
+ [1] 33252 - 30808 == 2443
+
+ ══ testthat results ═══════════════════════════════════════════════════════════
+ OK: 292 SKIPPED: 13 WARNINGS: 10 FAILED: 6
+ 1. Error: sample works (@test_04_dplyr.R#41)
+ 2. Failure: db allows svyby commands (@test_05_survey.R#60)
+ 3. Failure: db allows svyby commands (@test_05_survey.R#62)
+ 4. Failure: db allows svyby commands (@test_05_survey.R#66)
+ 5. Failure: db allows svyby commands (@test_05_survey.R#67)
+ 6. Failure: db allows svyby commands (@test_05_survey.R#69)
+
+ Error: testthat unit tests failed
+ Execution halted
+ ```
+
+## In both
+
* checking installed package size ... NOTE
```
- installed size is 5.7Mb
+ installed size is 5.8Mb
sub-directories of 1Mb or more:
libs 5.4Mb
```
-# pammtools
+# MSstatsTMT
+
+
+
+* Version: 1.1.2
+* Source code: https://github.com/cran/MSstatsTMT
+* URL: http://msstats.org/msstatstmt/
+* BugReports: https://groups.google.com/forum/#!forum/msstats
+* Date/Publication: 2019-02-27
+* Number of recursive dependencies: 82
-Version: 0.1.9
+Run `revdep_details(,"MSstatsTMT")` for more info
+
+
## Newly broken
-* checking tests ...
+* checking whether package ‘MSstatsTMT’ can be installed ... WARNING
```
- ERROR
- Running the tests in ‘tests/testthat.R’ failed.
- Last 13 lines of output:
- 41: tryCatchList(expr, classes, parentenv, handlers)
- 42: tryCatch(withCallingHandlers({ eval(code, test_env) if (!handled && !is.null(test)) { skip_empty() }}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error), error = handle_fatal, skip = function(e) { })
- 43: test_code(NULL, exprs, env)
- 44: source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap)
- 45: force(code)
- 46: with_reporter(reporter = reporter, start_end_reporter = start_end_reporter, { lister$start_file(basename(path)) source_file(path, new.env(parent = env), chdir = TRUE, wrap = wrap) end_context() })
- 47: FUN(X[[i]], ...)
- 48: lapply(paths, test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap)
- 49: force(code)
- 50: with_reporter(reporter = current_reporter, results <- lapply(paths, test_file, env = env, reporter = current_reporter, start_end_reporter = FALSE, load_helpers = FALSE, wrap = wrap))
- 51: test_files(paths, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, wrap = wrap)
- 52: test_dir(path = test_path, reporter = reporter, env = env, filter = filter, ..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, wrap = wrap)
- 53: test_package_dir(package = package, test_path = test_path, filter = filter, reporter = reporter, ..., stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, wrap = wrap)
- 54: test_check("pammtools")
- An irrecoverable exception occurred. R is aborting now ...
+ Found the following significant warnings:
+ Warning: replacing previous import ‘dplyr:::=’ by ‘data.table:::=’ when loading ‘MSstatsTMT’
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/MSstatsTMT/new/MSstatsTMT.Rcheck/00install.out’ for details.
```
-# perturbatr
+# networkreporting
-Version: 1.2.1
+
+
+* Version: 0.1.1
+* Source code: https://github.com/cran/networkreporting
+* Date/Publication: 2016-12-05 18:28:47
+* Number of recursive dependencies: 50
+
+Run `revdep_details(,"networkreporting")` for more info
+
+
## Newly broken
-* R CMD check timed out
-
+* checking whether package ‘networkreporting’ can be installed ... WARNING
+ ```
+ Found the following significant warnings:
+ Warning: replacing previous import ‘dplyr::as_name’ by ‘lazyeval::as_name’ when loading ‘networkreporting’
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/networkreporting/new/networkreporting.Rcheck/00install.out’ for details.
+ ```
-# pmc
+# nonmemica
-Version: 1.0.3
+
-## In both
+* Version: 0.9.0
+* Source code: https://github.com/cran/nonmemica
+* Date/Publication: 2019-04-25 12:10:02 UTC
+* Number of recursive dependencies: 59
-* R CMD check timed out
-
+Run `revdep_details(,"nonmemica")` for more info
-# rubias
+
-Version: 0.2.0
+## Newly broken
-## In both
+* checking whether package ‘nonmemica’ can be installed ... WARNING
+ ```
+ Found the following significant warnings:
+ Warning: replacing previous import ‘dplyr::as_name’ by ‘lazyeval::as_name’ when loading ‘nonmemica’
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/nonmemica/new/nonmemica.Rcheck/00install.out’ for details.
+ ```
+
+# perturbatr
+
+
+
+* Version: 1.2.1
+* Source code: https://github.com/cran/perturbatr
+* URL: https://github.com/cbg-ethz/perturbatr
+* BugReports: https://github.com/cbg-ethz/perturbatr/issues
+* Date/Publication: 2019-01-04
+* Number of recursive dependencies: 78
+
+Run `revdep_details(,"perturbatr")` for more info
+
+
+
+## Newly broken
* R CMD check timed out
-* checking dependencies in R code ... NOTE
+# processmapR
+
+
+
+* Version: 0.3.3
+* Source code: https://github.com/cran/processmapR
+* URL: https://www.bupar.net
+* Date/Publication: 2019-02-24 18:00:15 UTC
+* Number of recursive dependencies: 92
+
+Run `revdep_details(,"processmapR")` for more info
+
+
+
+## Newly broken
+
+* checking whether package ‘processmapR’ can be installed ... WARNING
```
- Namespace in Imports field not imported from: ‘ggplot2’
- All declared Imports should be used.
+ Found the following significant warnings:
+ Warning: replacing previous import ‘dplyr:::=’ by ‘data.table:::=’ when loading ‘processmapR’
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/processmapR/new/processmapR.Rcheck/00install.out’ for details.
```
# ruler
-Version: 0.2.0
+
+
+* Version: 0.2.0
+* Source code: https://github.com/cran/ruler
+* URL: https://echasnovski.github.io/ruler/, https://github.com/echasnovski/ruler
+* BugReports: https://github.com/echasnovski/ruler/issues
+* Date/Publication: 2019-02-15 21:00:03 UTC
+* Number of recursive dependencies: 46
+
+Run `revdep_details(,"ruler")` for more info
+
+
## Newly broken
@@ -536,7 +648,7 @@ Version: 0.2.0
37: is.data.frame(x)
══ testthat results ═══════════════════════════════════════════════════════════
- OK: 281 SKIPPED: 1 FAILED: 8
+ OK: 278 SKIPPED: 1 WARNINGS: 3 FAILED: 8
1. Error: expose works (@test-expose.R#188)
2. Error: expose preserves pack names (@test-expose.R#246)
3. Error: expose accounts for rule separator (@test-expose.R#264)
@@ -550,17 +662,93 @@ Version: 0.2.0
Execution halted
```
+# seplyr
+
+
+
+* Version: 0.8.3
+* Source code: https://github.com/cran/seplyr
+* URL: https://github.com/WinVector/seplyr/, https://winvector.github.io/seplyr/
+* BugReports: https://github.com/WinVector/seplyr/issues
+* Date/Publication: 2019-01-02 23:10:09 UTC
+* Number of recursive dependencies: 38
+
+Run `revdep_details(,"seplyr")` for more info
+
+
+
+## Newly broken
+
+* checking examples ... ERROR
+ ```
+ ...
+ > suppressPackageStartupMessages(library("dplyr"))
+ > # Example: clear one of a or b in any row where both are set.
+ > d <- data.frame(a = c(0, 0, 1, 1, 1, 1, 1, 1, 1, 1),
+ + b = c(0, 1, 0, 1, 1, 1, 1, 1, 1, 1),
+ + edited = FALSE)
+ >
+ > program <- if_else_device(
+ + testexpr = '(a+b)>1',
+ + thenexprs = c(
+ + if_else_device(
+ + testexpr = 'runif(n()) >= 0.5',
+ + thenexprs = 'a' := '0',
+ + elseexprs = 'b' := '0'),
+ + 'edited' := 'TRUE'))
+ Error: `:=` can only be used within a quasiquoted argument
+ Backtrace:
+ █
+ 1. ├─seplyr::if_else_device(...)
+ 2. ├─seplyr::if_else_device(...)
+ 3. └─`:=`("a", "0")
+ Execution halted
+ ```
+
+# socviz
+
+
+
+* Version: 1.0.0
+* Source code: https://github.com/cran/socviz
+* URL: https://github.com/kjhealy/socviz
+* BugReports: https://github.com/kjhealy/socviz/issues
+* Date/Publication: 2019-04-23 12:00:03 UTC
+* Number of recursive dependencies: 39
+
+Run `revdep_details(,"socviz")` for more info
+
+
+
+## Newly broken
+
+* checking installed package size ... NOTE
+ ```
+ installed size is 5.1Mb
+ sub-directories of 1Mb or more:
+ data 4.5Mb
+ ```
+
# spdplyr
-Version: 0.2.0
+
+
+* Version: 0.2.0
+* Source code: https://github.com/cran/spdplyr
+* URL: https://github.com/mdsumner/spdplyr
+* BugReports: https://github.com/mdsumner/spdplyr/issues
+* Date/Publication: 2019-02-04 09:50:02 UTC
+* Number of recursive dependencies: 50
+
+Run `revdep_details(,"spdplyr")` for more info
+
+
## Newly broken
* checking examples ... ERROR
```
...
- +
- + spmap %>% mutate_if(is.numeric, as.character)
+ spmap %>% mutate_all(funs(as.character))
+ spmap %>% mutate_at(vars(starts_with("L")), funs(as.integer))
+ }
@@ -576,9 +764,11 @@ Version: 0.2.0
7. ├─base::withVisible(function_list[[k]](value))
8. └─function_list[[k]](value)
9. └─dplyr::mutate_if(., is.numeric, as.character)
- 10. └─dplyr:::manip_if(...) /Users/romainfrancois/git/tidyverse/dplyr/R/colwise-mutate.R:240:2
- 11. └─dplyr:::tbl_if_syms(.tbl, .predicate, .env, .include_group_vars = .include_group_vars) /Users/romainfrancois/git/tidyverse/dplyr/R/colwise-mutate.R:285:2
- 12. ├─rlang::syms(tbl_if_vars(.tbl, .p, .env, ..., .include_group
+ 10. └─dplyr:::manip_if(...)
+ 11. └─dplyr:::tbl_if_syms(.tbl, .predicate, .env, .include_group_vars = .include_group_vars)
+ 12. ├─rlang::syms(tbl_if_vars(.tbl, .p, .env, ..., .include_group_vars = .include_group_vars))
+ 13. │ └─rlang:::map(x, sym)
+ 14. │ └─base::lapply(.x,
Execution halted
```
@@ -587,17 +777,17 @@ Version: 0.2.0
ERROR
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
- 10: manip_if(.tbl, .predicate, .funs, enquo(.funs), caller_env(), ...) at /Users/romainfrancois/git/tidyverse/dplyr/R/colwise-mutate.R:240
- 11: tbl_if_syms(.tbl, .predicate, .env, .include_group_vars = .include_group_vars) at /Users/romainfrancois/git/tidyverse/dplyr/R/colwise-mutate.R:285
- 12: syms(tbl_if_vars(.tbl, .p, .env, ..., .include_group_vars = .include_group_vars)) at /Users/romainfrancois/git/tidyverse/dplyr/R/colwise.R:218
+ 10: manip_if(.tbl, .predicate, .funs, enquo(.funs), caller_env(), ...)
+ 11: tbl_if_syms(.tbl, .predicate, .env, .include_group_vars = .include_group_vars)
+ 12: syms(tbl_if_vars(.tbl, .p, .env, ..., .include_group_vars = .include_group_vars))
13: map(x, sym)
14: lapply(.x, .f, ...)
- 15: tbl_if_vars(.tbl, .p, .env, ..., .include_group_vars = .include_group_vars) at /Users/romainfrancois/git/tidyverse/dplyr/R/colwise.R:218
- 16: as_data_mask(.tbl) at /Users/romainfrancois/git/tidyverse/dplyr/R/colwise.R:208
+ 15: tbl_if_vars(.tbl, .p, .env, ..., .include_group_vars = .include_group_vars)
+ 16: as_data_mask(.tbl)
17: rlang::abort(x)
══ testthat results ═══════════════════════════════════════════════════════════
- OK: 46 SKIPPED: 4 FAILED: 1
+ OK: 46 SKIPPED: 4 WARNINGS: 2 FAILED: 1
1. Error: mutate_all, mutate_at (@test-adv-dplyr.R#83)
Error: testthat unit tests failed
@@ -606,7 +796,18 @@ Version: 0.2.0
# strapgod
-Version: 0.0.1
+
+
+* Version: 0.0.1
+* Source code: https://github.com/cran/strapgod
+* URL: https://github.com/DavisVaughan/strapgod
+* BugReports: https://github.com/DavisVaughan/strapgod/issues
+* Date/Publication: 2019-03-16 14:00:03 UTC
+* Number of recursive dependencies: 52
+
+Run `revdep_details(,"strapgod")` for more info
+
+
## Newly broken
@@ -623,7 +824,7 @@ Version: 0.0.1
target is NULL, current is tbl_df
══ testthat results ═══════════════════════════════════════════════════════════
- OK: 146 SKIPPED: 0 FAILED: 3
+ OK: 146 SKIPPED: 0 WARNINGS: 0 FAILED: 3
1. Failure: group_map() (@test-dplyr-group-funs.R#43)
2. Failure: group_map() (@test-dplyr-group-funs.R#50)
3. Failure: group_map() (@test-dplyr-group-funs.R#52)
@@ -632,49 +833,137 @@ Version: 0.0.1
Execution halted
```
-# XBSeq
+# summariser
+
+
+
+* Version: 0.1.0
+* Source code: https://github.com/cran/summariser
+* URL: https://github.com/condwanaland/summariser
+* Date/Publication: 2017-03-23 13:10:18 UTC
+* Number of recursive dependencies: 41
-Version: 1.14.1
+Run `revdep_details(,"summariser")` for more info
+
+
+
+## Newly broken
+
+* checking whether package ‘summariser’ can be installed ... WARNING
+ ```
+ Found the following significant warnings:
+ Warning: replacing previous import ‘dplyr::as_name’ by ‘lazyeval::as_name’ when loading ‘summariser’
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/summariser/new/summariser.Rcheck/00install.out’ for details.
+ ```
+
+# tbl2xts
+
+
+
+* Version: 0.1.2
+* Source code: https://github.com/cran/tbl2xts
+* Date/Publication: 2017-08-02 13:50:58 UTC
+* Number of recursive dependencies: 39
+
+Run `revdep_details(,"tbl2xts")` for more info
+
+
+
+## Newly broken
+
+* checking whether package ‘tbl2xts’ can be installed ... WARNING
+ ```
+ Found the following significant warnings:
+ Warning: replacing previous import ‘dplyr::as_name’ by ‘lazyeval::as_name’ when loading ‘tbl2xts’
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/tbl2xts/new/tbl2xts.Rcheck/00install.out’ for details.
+ ```
## In both
-* R CMD check timed out
-
+* checking dependencies in R code ... NOTE
+ ```
+ Namespace in Imports field not imported from: ‘PerformanceAnalytics’
+ All declared Imports should be used.
+ ```
-* checking whether the namespace can be loaded with stated dependencies ... NOTE
+# TPP
+
+
+
+* Version: 3.10.1
+* Source code: https://github.com/cran/TPP
+* Date/Publication: 2019-01-04
+* Number of recursive dependencies: 83
+
+Run `revdep_details(,"TPP")` for more info
+
+
+
+## Newly broken
+
+* checking whether package ‘TPP’ can be installed ... WARNING
```
- Warning: no function found corresponding to methods exports from ‘XBSeq’ for: ‘conditions’, ‘conditions<-’, ‘dispTable’
-
- A namespace must be able to be loaded with just the base namespace
- loaded: otherwise if the namespace gets loaded by a saved object, the
- session will be unable to start.
-
- Probably some imports need to be declared in the NAMESPACE file.
+ Found the following significant warnings:
+ Warning: replacing previous import ‘data.table:::=’ by ‘dplyr:::=’ when loading ‘TPP’
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/TPP/new/TPP.Rcheck/00install.out’ for details.
+ ```
+
+## In both
+
+* checking installed package size ... NOTE
+ ```
+ installed size is 13.5Mb
+ sub-directories of 1Mb or more:
+ data 1.9Mb
+ example_data 8.0Mb
+ test_data 1.9Mb
+ ```
+
+* checking dependencies in R code ... NOTE
+ ```
+ Namespace in Imports field not imported from: ‘broom’
+ All declared Imports should be used.
+ Unexported objects imported by ':::' calls:
+ ‘doParallel:::.options’ ‘mefa:::rep.data.frame’
+ See the note in ?`:::` about the use of this operator.
```
* checking R code for possible problems ... NOTE
```
- ...
- estimateRealCount,XBSeqDataSet: no visible global function definition
- for ‘assay’
- estimateRealCount,XBSeqDataSet: no visible global function definition
- for ‘assay<-’
- estimateSCV,XBSeqDataSet: no visible global function definition for
- ‘conditions’
- estimateSCV,XBSeqDataSet: no visible global function definition for
- ‘dispTable<-’
+ File ‘TPP/R/TPP.R’:
+ .onLoad calls:
+ packageStartupMessage(msgText, "\n")
+
+ See section ‘Good practice’ in '?.onAttach'.
+
+ plot_fSta_distribution: no visible binding for global variable
+ ‘..density..’
+ plot_pVal_distribution: no visible binding for global variable
+ ‘..density..’
Undefined global functions or variables:
- ..count.. DataFrame Gamma Group Sample SummarizedExperiment assay
- assay<- assays baseMean coefficients complete.cases conditions cor
- data ddelap dispTable dispTable<- dnbinom dpois formula glm
- log2FoldChange median optim p.adjust pbeta predict qbeta quantile
- rnbinom scvBiasCorrectionFits
- Consider adding
- importFrom("stats", "Gamma", "coefficients", "complete.cases", "cor",
- "dnbinom", "dpois", "formula", "glm", "median", "optim",
- "p.adjust", "pbeta", "predict", "qbeta", "quantile",
- "rnbinom")
- importFrom("utils", "data")
- to your NAMESPACE file.
+ ..density..
+ ```
+
+# xesreadR
+
+
+
+* Version: 0.2.3
+* Source code: https://github.com/cran/xesreadR
+* URL: http://www.bupar.net
+* Date/Publication: 2019-03-19 12:50:03 UTC
+* Number of recursive dependencies: 49
+
+Run `revdep_details(,"xesreadR")` for more info
+
+
+
+## Newly broken
+
+* checking whether package ‘xesreadR’ can be installed ... WARNING
+ ```
+ Found the following significant warnings:
+ Warning: replacing previous import ‘dplyr:::=’ by ‘data.table:::=’ when loading ‘xesreadR’
+ See ‘/Users/romainfrancois/git/dplyr-revdep/dplyr/revdep/checks.noindex/xesreadR/new/xesreadR.Rcheck/00install.out’ for details.
```
diff --git a/revdep/revdep_dplyr0.8.1.md b/revdep/revdep_dplyr0.8.1.md
index c55ebd992e..5057d6edba 100644
--- a/revdep/revdep_dplyr0.8.1.md
+++ b/revdep/revdep_dplyr0.8.1.md
@@ -1,63 +1,31 @@
-## banR
+## replacing previous import ‘dplyr::as_name’ by ‘lazyeval::as_name’
-http error 503
+benthos, IAT, idealstan, lans2r, MSstatsTMT, networkreporting, nonmemica, summariser, tbl2xts
-## Cardinal
+## replacing previous import ‘dplyr:::=’ by ‘data.table:::=’
-Not correctly importing dplyr::group_by I guess
+bomrang, bupaR, edeaR, heuristicsmineR, TPP, xesreadR
-## compareDF
+related problem in `seplyr`
-Test bug
-## ELMER
-## TCGAbiolinks
+## Not correctly importing dplyr::group_by
-there is no package called 'sesameData'
+Cardinal
-## FindMyFriends
-## grasp2db
-## HTSSIP
-## MonetDBLite
-## perturbatr
-## pmc
-## QuaternaryProd
-## rubias
-## XBSeq
-## GEOmetadb
-## IrisSpatialFeatures
+## Not sure what the problem is
-timed out
+CluMP, INDperform, InjurySeverityScore, MonetDBLite
-## corrr
+## test bug
-https://github.com/drsimonj/corrr/issues/76
+compareDF, ruler
-## InjurySeverityScore
+## colwixe issue
-https://github.com/dajuntian/InjurySeverityScore/issues/1
+spdplyr
-## ruler
-## spdplyr
-## CluMP
-
-Not sure what the problem is
-
-# Fixed issues
-
-## dbplyr
-## modeldb
-
-https://github.com/tidyverse/dplyr/issues/4305
-
-Fixed via dev version of dbplyr
-
-## strapgod
-
-Fixed in dev version, ready to be released
-
-## broomExtra
-
-use of experimental group_map(), fixed in dev version.
+## Fixed in dev version
+strapgod