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SPIKY12.aux
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\newlabel{fig:Fig2-SPIKE-Representations}{{2}{5}{\abb The different levels of information reduction for the SPIKE-distance. A. Top: Spike rasterplot of $20$ artificially generated spike trains divided in $4$ spike train groups of $5$ spike trains each. The clustering behavior changes every $500$ ms. Bottom: Dissimilarity profiles of the SPIKE-distance for the four spike train groups (thin color-coded lines) and for all spike trains (thick black line). The overall dissimilarity is defined as the temporal average of the dissimilarity profile of all spike trains ($0.192$ in this case) and is marked by a black horizontal line. B-E. Matrices of pairwise instantaneous dissimilarity values for a single time instant, for two selective averages and for a triggered average. F. Matrices of overall pairwise instantaneous dissimilarity values for the $4$ spike train groups. G. Dendrogram of spike train group matrix in F. H-I. Dendrogram of spike train matrices in D and E. Note that the triggered averages in contrast to the overall average captures the local similarity between $5$ of the spike trains}{figure.2}{}}
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\newlabel{ss:Access}{{3.1}{6}{Access to SPIKY and how to get started}{subsection.3.1}{}}
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\@writefile{lof}{\contentsline {figure}{\numberline {3}{\ignorespaces \relax \fontsize {8}{10}\selectfont \abovedisplayskip 7\p@ plus2\p@ minus4\p@ \belowdisplayskip \abovedisplayskip \abovedisplayshortskip \z@ plus1\p@ \belowdisplayshortskip 3\p@ plus1\p@ minus2\p@ \def \leftmargin \leftmargini \labelwidth \labelwidthi \labelsep 0.5em\topsep \z@ \partopsep \z@ \parsep \z@ \itemsep \z@ \listparindent 1em{\topsep 0.5\@bls \parsep \z@ \itemsep \parsep }\sf Flowchart describing the workflow of SPIKY from the input of spike train data to the output of results. A typical SPIKY-session begins at the top with 'Get data', then goes clockwise and ends on the left with 'Get results'. In the center of the circle the SPIKY-logo is depicted.}}{6}{figure.3}}
\newlabel{fig:Fig3-SPIKY-Flowchart}{{3}{6}{\abb Flowchart describing the workflow of SPIKY from the input of spike train data to the output of results. A typical SPIKY-session begins at the top with 'Get data', then goes clockwise and ends on the left with 'Get results'. In the center of the circle the SPIKY-logo is depicted}{figure.3}{}}
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\citation{Rusu14}
\citation{Thibeault14}
\citation{Papoutsi13}
\citation{DiPoppa13}
\citation{Rusu14}
\citation{Sacre14}
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\bibcite{Bower12}{{1}{2012}{{Bower et al.}}{{}}}
\bibcite{DiPoppa13}{{2}{2013}{{C{Di Poppa} and Gutkin}}{{}}}
\bibcite{Gruen09}{{3}{2009}{{Gruen}}{{}}}
\bibcite{Hochberg06}{{4}{2006}{{Hochberg et al.}}{{}}}
\bibcite{Kass05}{{5}{2005}{{Kass et al.}}{{}}}
\bibcite{Kreuz09}{{6}{2009}{{Kreuz et al.}}{{}}}
\bibcite{Kreuz11}{{7}{2011}{{Kreuz et al.}}{{}}}
\bibcite{Kreuz13}{{8}{2013}{{Kreuz et al.}}{{}}}
\bibcite{Kreuz07c}{{9}{2007}{{Kreuz et al.}}{{}}}
\bibcite{Kumar10}{{10}{2010}{{Kumar et al.}}{{}}}
\bibcite{Louis10}{{11}{2010}{{Louis et al.}}{{}}}
\bibcite{Mainen95}{{12}{1995}{{Mainen and Sejnowski}}{{}}}
\bibcite{Miller08}{{13}{2008}{{Miller and Wilson}}{{}}}
\bibcite{Mormann07}{{14}{2007}{{Mormann et~al.}}{{}}}
\bibcite{Nirenberg07}{{15}{2007}{{Nirenberg and Victor}}{{}}}
\bibcite{Papoutsi13}{{16}{2013}{{Papoutsi et~al.}}{{}}}
\bibcite{Pikovsky01}{{17}{2001}{{Pikovsky et~al.}}{{}}}
\bibcite{Rusu14}{{18}{2014}{{Rusu and Florian}}{{}}}
\bibcite{Secr14}{{19}{2014}{{Secr and Sepulchre}}{{}}}
\bibcite{Sanchez08}{{20}{2008}{{Sanchez}}{{}}}
\bibcite{Shlens08}{{21}{2008}{{Shlens et al.}}{{}}}
\bibcite{Thibeault14}{{22}{2014}{{Thibeault et al.}}{{}}}
\bibcite{Tiesinga08}{{23}{2008}{{Tiesinga et al.}}{{}}}
\bibcite{Truccolo11}{{24}{2011}{{Truccolo et al.}}{{}}}
\bibcite{Victor05}{{25}{2005}{{Victor}}{{}}}
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