pytest.yml

name: PyTest
on:
  push:
    branches:
      - main
  pull_request:
    branches:
      - main


jobs:
  orderly:
    runs-on: ubuntu-latest
    strategy:
      fail-fast: false
      matrix:
        group: [1, 2, 3, 4, 5]
    timeout-minutes: 15

    steps:
      - name: Check out repository code
        uses: actions/checkout@v2

      # Setup Python (faster than using Python container)
      - name: Setup Python
        uses: actions/setup-python@v2
        with:
          python-version: "3.10"

      - name: Install libpq-dev
        if: matrix.os == 'ubuntu-latest'
        run: sudo apt-get install -y libpq-dev

      - name: Install poetry
        uses: Gr1N/setup-poetry@v8

      - name: Set Poetry config
        run: |
          poetry config virtualenvs.in-project true
          poetry config virtualenvs.path ~/.virtualenvs

      # run poetry install if the poetry lock has changed
      - name: Install dependencies
        if: steps.cache-poetry.outputs.cache-hit != 'true'
        run: poetry install --no-interaction --no-root

      - name: Run test suite
        run: poetry run pytest -v --cov --ignore=condition_prediction --splits 5 --group ${{ matrix.group }} --splitting-algorithm least_duration

      - name: Upload coverage
        uses: actions/upload-artifact@v2
        with:
          name: coverage${{ matrix.group }}
          path: .coverage


  orderly_coverage:
    needs: orderly
    runs-on: ubuntu-latest
    steps:
      - uses: actions/checkout@v2

      - name: Set up Python 3.8
        uses: actions/setup-python@v2
        with:
          python-version: 3.8

      - name: Install coverage
        run: pip install coverage

      - name: Download all artifacts
        # Downloads coverage1, coverage2, etc.
        uses: actions/download-artifact@v2

      - name: Run coverage
        run: |
          coverage combine coverage*/.coverage*
          coverage report --fail-under=85
          coverage html

      - name: Upload
        uses: actions/upload-artifact@v1
        with:
          name: coverage
          path: htmlcov

  condition_prediction:
    runs-on: ubuntu-latest
    strategy:
      fail-fast: false
    timeout-minutes: 10

    steps:
      - name: Check out repository code
        uses: actions/checkout@v2

      # Setup Python (faster than using Python container)
      - name: Setup Python
        uses: actions/setup-python@v2
        with:
          python-version: "3.10"

      - name: Install libpq-dev
        if: matrix.os == 'ubuntu-latest'
        run: sudo apt-get install -y libpq-dev

      - name: Install poetry
        run: python -m pip install --upgrade poetry wheel

      # - name: Add coverage
      #   run: poetry add pytest-cov

      # - name: Set Poetry config
      #   run: |
      #     poetry config virtualenvs.in-project true
      #     poetry config virtualenvs.path ~/.virtualenvs

      # run poetry install if the poetry lock has changed
      - name: Install dependencies
        if: steps.cache-poetry.outputs.cache-hit != 'true'
        run: cd condition_prediction && poetry install --no-interaction

      - name: Run test suite
        run: cd condition_prediction && poetry run pytest -v

      # - name: Upload
      #   uses: actions/upload-artifact@v1
      #   with:
      #     name: coverage
      #     path: htmlcov