diff --git a/revdep/README.md b/revdep/README.md index 2ab857f..83d88a0 100644 --- a/revdep/README.md +++ b/revdep/README.md @@ -2,7 +2,7 @@ |field |value | |:--------|:----------------------------| -|version |R version 4.4.0 (2024-04-24) | +|version |R version 4.4.1 (2024-06-14) | |os |Debian GNU/Linux trixie/sid | |system |x86_64, linux-gnu | |ui |X11 | @@ -10,46 +10,51 @@ |collate |en_AU.UTF-8 | |ctype |en_AU.UTF-8 | |tz |Australia/Sydney | -|date |2024-06-08 | +|date |2024-09-30 | |pandoc |3.1.3 @ /usr/bin/pandoc | # Dependencies |package |old |new |Δ | |:--------------|:--------|:----------|:--| -|statnet.common |4.9.0 |4.10.0-442 |* | +|statnet.common |4.9.0 |4.10.0-447 |* | |coda |0.19-4.1 |0.19-4.1 | | |lattice |0.22-6 |0.22-6 | | |Matrix |NA |1.7-0 |* | # Revdeps -## Failed to check (3) +## Failed to check (8) -|package |version |error |warning |note | -|:---------|:-------|:-----|:-------|:----| +|package |version |error |warning |note | +|:----------|:-------|:-----|:-------|:----| +|[BANAM](failures.md#banam)|0.2.1 |1 | | | +|[BFpack](failures.md#bfpack)|1.3.0 |1 | | | +|[BGGM](failures.md#bggm)|2.1.3 |1 | | | +|[ecoCopula](failures.md#ecocopula)|1.0.2 |1 | | | |[GOxploreR](failures.md#goxplorer)|1.2.7 |1 | | | +|[KinMixLite](failures.md#kinmixlite)|2.1.0 |1 | | | |[lolog](failures.md#lolog)|1.3.1 |1 | |2 | |[MRPC](failures.md#mrpc)|3.1.0 |1 | | | -## All (136) +## All (135) |package |version |error |warning |note | |:------------------|:--------|:-----|:-------|:----| |[amen](problems.md#amen)|1.4.5 |1 | | | |asnipe |1.1.17 | | | | -|BANAM |0.2.0 | | | | +|[BANAM](failures.md#banam)|0.2.1 |1 | | | |[BasketballAnalyzeR](problems.md#basketballanalyzer)|0.5.0 | | |1 | |Bergm |5.0.7 | | | | -|BFpack |1.2.3 | | | | -|[BGGM](problems.md#bggm)|2.1.1 | | |1 | -|[bigergm](problems.md#bigergm)|1.1.0 | | |1 | +|[BFpack](failures.md#bfpack)|1.3.0 |1 | | | +|[BGGM](failures.md#bggm)|2.1.3 |1 | | | +|[bigergm](problems.md#bigergm)|1.2.1 | | |1 | |[bingat](problems.md#bingat)|1.3 | | |1 | |bipartite |2.20 | | | | |blockmodeling |1.1.5 | | | | |BlockmodelingGUI |1.8.4 | | | | |[bootcluster](problems.md#bootcluster)|0.3.2 | | |1 | -|[broom](problems.md#broom)|1.0.6 | |1 | | +|broom |1.0.7 | | | | |[btergm](problems.md#btergm)|1.10.12 | | |1 | |calmr |0.6.1 | | | | |CEoptim |1.3 | | | | @@ -59,25 +64,25 @@ |concorR |0.2.1 | | | | |[conserveR](problems.md#conserver)|1.0.4 | | |2 | |cssTools |1.0 | | | | -|degreenet |1.3-5 | | | | +|degreenet |1.3-6 | | | | |discourseGT |1.2.0 | | | | |[dnr](problems.md#dnr)|0.3.5 | | |1 | -|ecoCopula |1.0.2 | | | | -|econet |1.0.0 | | | | +|[ecoCopula](failures.md#ecocopula)|1.0.2 |1 | | | +|[econet](problems.md#econet)|1.0.0.1 | | |1 | |[edgebundle](problems.md#edgebundle)|0.4.2 | | |1 | -|EGAnet |2.0.6 | | | | +|EGAnet |2.0.8 | | | | |egor |1.24.2 | | | | -|[EloRating](problems.md#elorating)|0.46.11 |1 | | | +|[EloRating](problems.md#elorating)|0.46.18 |1 | | | |epimdr |0.6-5 | | | | |epimdr2 |1.0-9 | | | | -|EpiModel |2.4.0 | | | | +|[EpiModel](problems.md#epimodel)|2.4.0 | | |1 | |epinet |2.1.11 | | | | -|equateIRT |2.4.0 | | | | +|equateIRT |2.5.0 | | | | |[ergm](problems.md#ergm)|4.6.0 |1 | |1 | -|ergm.count |4.1.1 | | | | +|ergm.count |4.1.2 | | | | |ergm.ego |1.1.0 | | | | |[ergm.multi](problems.md#ergmmulti)|0.2.1 |1 | | | -|[ergm.rank](problems.md#ergmrank)|4.1.0 | | |1 | +|ergm.rank |4.1.1 | | | | |[ergMargins](problems.md#ergmargins)|1.3 | | |1 | |ergmgp |0.1-1 | | | | |[ergmito](problems.md#ergmito)|0.3-1 | | |1 | @@ -94,39 +99,38 @@ |[ggnetwork](problems.md#ggnetwork)|0.5.13 | | |1 | |[ggraph](problems.md#ggraph)|2.2.1 | | |1 | |[GOxploreR](failures.md#goxplorer)|1.2.7 |1 | | | -|GUEST |0.1.0 | | | | +|GUEST |0.2.0 | | | | |haplotypes |1.1.3.1 | | | | -|[HiveR](problems.md#hiver)|0.3.63 | |1 | | +|[inferCSN](problems.md#infercsn)|1.0.8 |1 | |1 | |[InflectSSP](problems.md#inflectssp)|1.6 | | |1 | |intensitynet |1.4.0 | | | | |intergraph |2.0-4 | | | | |interplex |0.1.2 | | | | |ITNr |0.7.0 | | | | |keyplayer |1.0.4 | | | | -|KinMixLite |2.1.0 | | | | +|[KinMixLite](failures.md#kinmixlite)|2.1.0 |1 | | | |[latentnet](problems.md#latentnet)|2.11.0 | | |1 | |[leiden](problems.md#leiden)|0.4.3.1 | | |1 | |Linkage |0.9 | | | | |[lolog](failures.md#lolog)|1.3.1 |1 | |2 | -|[manynet](problems.md#manynet)|0.4.4 | | |2 | +|[manynet](problems.md#manynet)|1.1.0 | | |2 | |[MBCbook](problems.md#mbcbook)|0.1.2 | | |1 | |MEclustnet |1.2.2 | | | | |metanetwork |0.7.0 | | | | -|migraph |1.3.4 | | | | |mlergm |0.8 | | | | |motifr |1.0.0 | | | | |[MRPC](failures.md#mrpc)|3.1.0 |1 | | | |MSG |0.8 | | | | |multinets |0.2.2 | | | | -|[ndtv](problems.md#ndtv)|0.13.3 | | |1 | +|ndtv |0.13.4 | | | | |Neighboot |1.0.1 | | | | |nemBM |1.00.01 | | | | |NetCluster |0.2 | | | | |[netdiffuseR](problems.md#netdiffuser)|1.22.6 | | |1 | |netmap |0.1.4 | | | | -|[netmediate](problems.md#netmediate)|0.1.4 | | |1 | +|[netmediate](problems.md#netmediate)|1.0.1 | | |1 | |NetMix |0.2.0.2 | | | | -|netplot |0.2-0 | | | | +|netplot |0.3-0 | | | | |network |1.18.2 | | | | |[networkABC](problems.md#networkabc)|0.8-1 |1 | | | |[NetworkChange](problems.md#networkchange)|0.8 | | |1 | @@ -139,9 +143,9 @@ |[PDN](problems.md#pdn)|0.1.0 | | |1 | |pkggraph |0.2.3 | | | | |pulsar |0.3.11 | | | | -|quanteda.textplots |0.94.4 | | | | +|quanteda.textplots |0.95 | | | | |QuantNorm |1.0.5 | | | | -|RDS |0.9-9 | | | | +|RDS |0.9-10 | | | | |[relevent](problems.md#relevent)|1.2-1 | | |1 | |rem |1.3.1 | | | | |rgraph6 |2.0-4 | | | | @@ -151,24 +155,24 @@ |[SBICgraph](problems.md#sbicgraph)|1.0.0 | | |2 | |[sfc](problems.md#sfc)|0.1.0 | | |1 | |[sidier](problems.md#sidier)|4.1.0 | | |1 | -|sna |2.7-2 | | | | -|[spaceNet](problems.md#spacenet)|1.2 | | |1 | +|sna |2.8 | | | | +|[spaceNet](problems.md#spacenet)|1.2 |1 | |1 | |SparseTSCGM |4.0 | | | | -|sspse |1.1.0-1 | | | | +|sspse |1.1.0-2 | | | | |[SSrat](problems.md#ssrat)|1.1 | | |1 | |[stargazer](problems.md#stargazer)|5.2.3 | | |2 | |[statnet](problems.md#statnet)|2019.6 | | |2 | -|[statnetWeb](problems.md#statnetweb)|0.5.6 | | |1 | +|statnetWeb |0.5.8 | | | | |[tergm](problems.md#tergm)|4.2.0 | | |1 | |tergmLite |2.6.1 | | | | -|[texreg](problems.md#texreg)|1.39.3 | | |2 | +|[texreg](problems.md#texreg)|1.39.4 | | |2 | |tidygraph |1.3.1 | | | | |[tip](problems.md#tip)|0.1.0 | | |1 | |tsna |0.3.5 | | | | |VBLPCM |2.4.9 | | | | -|[VineCopula](problems.md#vinecopula)|2.5.0 | | |2 | -|vivid |0.2.8 | | | | -|[webSDM](problems.md#websdm)|1.1-4 | | |1 | +|VineCopula |2.5.1 | | | | +|vivid |0.2.9 | | | | +|webSDM |1.1-5 | | | | |[WOTPLY](problems.md#wotply)|0.1.0 | | |1 | |[WRSS](problems.md#wrss)|3.1 | | |1 | |[xergm.common](problems.md#xergmcommon)|1.7.8 | | |2 | diff --git a/revdep/cran.md b/revdep/cran.md index c1cbf03..852836d 100644 --- a/revdep/cran.md +++ b/revdep/cran.md @@ -1,14 +1,19 @@ ## revdepcheck results -We checked 136 reverse dependencies, comparing R CMD check results across CRAN and dev versions of this package. +We checked 135 reverse dependencies, comparing R CMD check results across CRAN and dev versions of this package. * We saw 0 new problems - * We failed to check 3 packages + * We failed to check 8 packages Issues with CRAN packages are summarised below. ### Failed to check -* GOxploreR (NA) -* lolog (NA) -* MRPC (NA) +* BANAM (NA) +* BFpack (NA) +* BGGM (NA) +* ecoCopula (NA) +* GOxploreR (NA) +* KinMixLite (NA) +* lolog (NA) +* MRPC (NA) diff --git a/revdep/failures.md b/revdep/failures.md index 83b55a0..cc59776 100644 --- a/revdep/failures.md +++ b/revdep/failures.md @@ -1,3 +1,285 @@ +# BANAM + +
+ +* Version: 0.2.1 +* GitHub: NA +* Source code: https://github.com/cran/BANAM +* Date/Publication: 2024-06-20 10:30:02 UTC +* Number of recursive dependencies: 96 + +Run `revdepcheck::revdep_details(, "BANAM")` for more info + +
+ +## In both + +* checking whether package ‘BANAM’ can be installed ... ERROR + ``` + Installation failed. + See ‘/home/pavel/Documents/Research/Software/statnet/statnet.common/revdep/checks/BANAM/new/BANAM.Rcheck/00install.out’ for details. + ``` + +## Installation + +### Devel + +``` +* installing *source* package ‘BANAM’ ... +** package ‘BANAM’ successfully unpacked and MD5 sums checked +** using staged installation +** R +** data +*** moving datasets to lazyload DB +** byte-compile and prepare package for lazy loading +Error: package or namespace load failed for ‘BFpack’ in dyn.load(file, DLLpath = DLLpath, ...): + unable to load shared object '/home/pavel/Documents/Research/Software/statnet/statnet.common/revdep/library/BANAM/gsl/libs/gsl.so': + libgsl.so.27: cannot open shared object file: No such file or directory +Execution halted +ERROR: lazy loading failed for package ‘BANAM’ +* removing ‘/home/pavel/Documents/Research/Software/statnet/statnet.common/revdep/checks/BANAM/new/BANAM.Rcheck/BANAM’ + + +``` +### CRAN + +``` +* installing *source* package ‘BANAM’ ... +** package ‘BANAM’ successfully unpacked and MD5 sums checked +** using staged installation +** R +** data +*** moving datasets to lazyload DB +** byte-compile and prepare package for lazy loading +Error: package or namespace load failed for ‘BFpack’ in dyn.load(file, DLLpath = DLLpath, ...): + unable to load shared object '/home/pavel/Documents/Research/Software/statnet/statnet.common/revdep/library/BANAM/gsl/libs/gsl.so': + libgsl.so.27: cannot open shared object file: No such file or directory +Execution halted +ERROR: lazy loading failed for package ‘BANAM’ +* removing ‘/home/pavel/Documents/Research/Software/statnet/statnet.common/revdep/checks/BANAM/old/BANAM.Rcheck/BANAM’ + + +``` +# BFpack + +
+ +* Version: 1.3.0 +* GitHub: https://github.com/jomulder/BFpack +* Source code: https://github.com/cran/BFpack +* Date/Publication: 2024-06-19 10:50:02 UTC +* Number of recursive dependencies: 106 + +Run `revdepcheck::revdep_details(, "BFpack")` for more info + +
+ +## In both + +* checking whether package ‘BFpack’ can be installed ... ERROR + ``` + Installation failed. + See ‘/home/pavel/Documents/Research/Software/statnet/statnet.common/revdep/checks/BFpack/new/BFpack.Rcheck/00install.out’ for details. + ``` + +## Installation + +### Devel + +``` +* installing *source* package ‘BFpack’ ... +** package ‘BFpack’ successfully unpacked and MD5 sums checked +** using staged installation +** libs +using C compiler: ‘gcc (Debian 14.2.0-3) 14.2.0’ +using Fortran compiler: ‘GNU Fortran (Debian 14.2.0-3) 14.2.0’ +gcc -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -c BFpack_init.c -o BFpack_init.o +gfortran -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.4.1=. -fstack-protector-strong -fstack-clash-protection -fcf-protection -c bct_mixedordinal.f90 -o bct_mixedordinal.o +gfortran -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.4.1=. -fstack-protector-strong -fstack-clash-protection -fcf-protection -c bct_prior.f90 -o bct_prior.o +gcc -shared -L/usr/lib/R/lib -Wl,-z,relro -o BFpack.so BFpack_init.o bct_mixedordinal.o bct_prior.o -llapack -lblas -lgfortran -lm -lquadmath -L/usr/lib/R/lib -lR +... +*** moving datasets to lazyload DB +** inst +** byte-compile and prepare package for lazy loading +Error in dyn.load(file, DLLpath = DLLpath, ...) : + unable to load shared object '/home/pavel/Documents/Research/Software/statnet/statnet.common/revdep/library/BFpack/gsl/libs/gsl.so': + libgsl.so.27: cannot open shared object file: No such file or directory +Calls: ... asNamespace -> loadNamespace -> library.dynam -> dyn.load +Execution halted +ERROR: lazy loading failed for package ‘BFpack’ +* removing ‘/home/pavel/Documents/Research/Software/statnet/statnet.common/revdep/checks/BFpack/new/BFpack.Rcheck/BFpack’ + + +``` +### CRAN + +``` +* installing *source* package ‘BFpack’ ... +** package ‘BFpack’ successfully unpacked and MD5 sums checked +** using staged installation +** libs +using C compiler: ‘gcc (Debian 14.2.0-3) 14.2.0’ +using Fortran compiler: ‘GNU Fortran (Debian 14.2.0-3) 14.2.0’ +gcc -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -c BFpack_init.c -o BFpack_init.o +gfortran -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.4.1=. -fstack-protector-strong -fstack-clash-protection -fcf-protection -c bct_mixedordinal.f90 -o bct_mixedordinal.o +gfortran -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.4.1=. -fstack-protector-strong -fstack-clash-protection -fcf-protection -c bct_prior.f90 -o bct_prior.o +gcc -shared -L/usr/lib/R/lib -Wl,-z,relro -o BFpack.so BFpack_init.o bct_mixedordinal.o bct_prior.o -llapack -lblas -lgfortran -lm -lquadmath -L/usr/lib/R/lib -lR +... +*** moving datasets to lazyload DB +** inst +** byte-compile and prepare package for lazy loading +Error in dyn.load(file, DLLpath = DLLpath, ...) : + unable to load shared object '/home/pavel/Documents/Research/Software/statnet/statnet.common/revdep/library/BFpack/gsl/libs/gsl.so': + libgsl.so.27: cannot open shared object file: No such file or directory +Calls: ... asNamespace -> loadNamespace -> library.dynam -> dyn.load +Execution halted +ERROR: lazy loading failed for package ‘BFpack’ +* removing ‘/home/pavel/Documents/Research/Software/statnet/statnet.common/revdep/checks/BFpack/old/BFpack.Rcheck/BFpack’ + + +``` +# BGGM + +
+ +* Version: 2.1.3 +* GitHub: https://github.com/donaldRwilliams/BGGM +* Source code: https://github.com/cran/BGGM +* Date/Publication: 2024-07-05 20:30:02 UTC +* Number of recursive dependencies: 206 + +Run `revdepcheck::revdep_details(, "BGGM")` for more info + +
+ +## In both + +* checking whether package ‘BGGM’ can be installed ... ERROR + ``` + Installation failed. + See ‘/home/pavel/Documents/Research/Software/statnet/statnet.common/revdep/checks/BGGM/new/BGGM.Rcheck/00install.out’ for details. + ``` + +## Installation + +### Devel + +``` +* installing *source* package ‘BGGM’ ... +** package ‘BGGM’ successfully unpacked and MD5 sums checked +** using staged installation +checking whether the C++ compiler works... yes +checking for C++ compiler default output file name... a.out +checking for suffix of executables... +checking whether we are cross compiling... no +checking for suffix of object files... o +checking whether we are using the GNU C++ compiler... yes +checking whether g++ -std=gnu++17 accepts -g... yes +... +*** moving datasets to lazyload DB +** inst +** byte-compile and prepare package for lazy loading +Error in dyn.load(file, DLLpath = DLLpath, ...) : + unable to load shared object '/home/pavel/Documents/Research/Software/statnet/statnet.common/revdep/library/BGGM/gsl/libs/gsl.so': + libgsl.so.27: cannot open shared object file: No such file or directory +Calls: ... asNamespace -> loadNamespace -> library.dynam -> dyn.load +Execution halted +ERROR: lazy loading failed for package ‘BGGM’ +* removing ‘/home/pavel/Documents/Research/Software/statnet/statnet.common/revdep/checks/BGGM/new/BGGM.Rcheck/BGGM’ + + +``` +### CRAN + +``` +* installing *source* package ‘BGGM’ ... +** package ‘BGGM’ successfully unpacked and MD5 sums checked +** using staged installation +checking whether the C++ compiler works... yes +checking for C++ compiler default output file name... a.out +checking for suffix of executables... +checking whether we are cross compiling... no +checking for suffix of object files... o +checking whether we are using the GNU C++ compiler... yes +checking whether g++ -std=gnu++17 accepts -g... yes +... +*** moving datasets to lazyload DB +** inst +** byte-compile and prepare package for lazy loading +Error in dyn.load(file, DLLpath = DLLpath, ...) : + unable to load shared object '/home/pavel/Documents/Research/Software/statnet/statnet.common/revdep/library/BGGM/gsl/libs/gsl.so': + libgsl.so.27: cannot open shared object file: No such file or directory +Calls: ... asNamespace -> loadNamespace -> library.dynam -> dyn.load +Execution halted +ERROR: lazy loading failed for package ‘BGGM’ +* removing ‘/home/pavel/Documents/Research/Software/statnet/statnet.common/revdep/checks/BGGM/old/BGGM.Rcheck/BGGM’ + + +``` +# ecoCopula + +
+ +* Version: 1.0.2 +* GitHub: NA +* Source code: https://github.com/cran/ecoCopula +* Date/Publication: 2022-03-02 00:20:02 UTC +* Number of recursive dependencies: 114 + +Run `revdepcheck::revdep_details(, "ecoCopula")` for more info + +
+ +## In both + +* checking whether package ‘ecoCopula’ can be installed ... ERROR + ``` + Installation failed. + See ‘/home/pavel/Documents/Research/Software/statnet/statnet.common/revdep/checks/ecoCopula/new/ecoCopula.Rcheck/00install.out’ for details. + ``` + +## Installation + +### Devel + +``` +* installing *source* package ‘ecoCopula’ ... +** package ‘ecoCopula’ successfully unpacked and MD5 sums checked +** using staged installation +** R +** data +*** moving datasets to lazyload DB +** inst +** byte-compile and prepare package for lazy loading +Error: package or namespace load failed for ‘mvabund’ in dyn.load(file, DLLpath = DLLpath, ...): + unable to load shared object '/home/pavel/Documents/Research/Software/statnet/statnet.common/revdep/library/ecoCopula/mvabund/libs/mvabund.so': + libgsl.so.27: cannot open shared object file: No such file or directory +Execution halted +ERROR: lazy loading failed for package ‘ecoCopula’ +* removing ‘/home/pavel/Documents/Research/Software/statnet/statnet.common/revdep/checks/ecoCopula/new/ecoCopula.Rcheck/ecoCopula’ + + +``` +### CRAN + +``` +* installing *source* package ‘ecoCopula’ ... +** package ‘ecoCopula’ successfully unpacked and MD5 sums checked +** using staged installation +** R +** data +*** moving datasets to lazyload DB +** inst +** byte-compile and prepare package for lazy loading +Error: package or namespace load failed for ‘mvabund’ in dyn.load(file, DLLpath = DLLpath, ...): + unable to load shared object '/home/pavel/Documents/Research/Software/statnet/statnet.common/revdep/library/ecoCopula/mvabund/libs/mvabund.so': + libgsl.so.27: cannot open shared object file: No such file or directory +Execution halted +ERROR: lazy loading failed for package ‘ecoCopula’ +* removing ‘/home/pavel/Documents/Research/Software/statnet/statnet.common/revdep/checks/ecoCopula/old/ecoCopula.Rcheck/ecoCopula’ + + +``` # GOxploreR
@@ -54,6 +336,25 @@ ERROR: lazy loading failed for package ‘GOxploreR’ ``` +# KinMixLite + +
+ +* Version: 2.1.0 +* GitHub: NA +* Source code: https://github.com/cran/KinMixLite +* Date/Publication: 2023-04-09 12:50:02 UTC +* Number of recursive dependencies: 49 + +Run `revdepcheck::revdep_details(, "KinMixLite")` for more info + +
+ +## In both + +* R CMD check timed out + + # lolog
@@ -75,9 +376,9 @@ Run `revdepcheck::revdep_details(, "lolog")` for more info * checking installed package size ... NOTE ``` - installed size is 26.9Mb + installed size is 29.0Mb sub-directories of 1Mb or more: - libs 25.3Mb + libs 27.3Mb ``` * checking whether startup messages can be suppressed ... NOTE @@ -107,7 +408,7 @@ Run `revdepcheck::revdep_details(, "lolog")` for more info * GitHub: NA * Source code: https://github.com/cran/MRPC * Date/Publication: 2022-04-11 14:32:34 UTC -* Number of recursive dependencies: 184 +* Number of recursive dependencies: 170 Run `revdepcheck::revdep_details(, "MRPC")` for more info diff --git a/revdep/problems.md b/revdep/problems.md index df615a5..c4c217c 100644 --- a/revdep/problems.md +++ b/revdep/problems.md @@ -39,6 +39,68 @@ Run `revdepcheck::revdep_details(, "amen")` for more info Execution halted ``` +# BANAM + +
+ +* Version: 0.2.1 +* GitHub: NA +* Source code: https://github.com/cran/BANAM +* Date/Publication: 2024-06-20 10:30:02 UTC +* Number of recursive dependencies: 96 + +Run `revdepcheck::revdep_details(, "BANAM")` for more info + +
+ +## In both + +* checking whether package ‘BANAM’ can be installed ... ERROR + ``` + Installation failed. + See ‘/home/pavel/Documents/Research/Software/statnet/statnet.common/revdep/checks/BANAM/new/BANAM.Rcheck/00install.out’ for details. + ``` + +## Installation + +### Devel + +``` +* installing *source* package ‘BANAM’ ... +** package ‘BANAM’ successfully unpacked and MD5 sums checked +** using staged installation +** R +** data +*** moving datasets to lazyload DB +** byte-compile and prepare package for lazy loading +Error: package or namespace load failed for ‘BFpack’ in dyn.load(file, DLLpath = DLLpath, ...): + unable to load shared object '/home/pavel/Documents/Research/Software/statnet/statnet.common/revdep/library/BANAM/gsl/libs/gsl.so': + libgsl.so.27: cannot open shared object file: No such file or directory +Execution halted +ERROR: lazy loading failed for package ‘BANAM’ +* removing ‘/home/pavel/Documents/Research/Software/statnet/statnet.common/revdep/checks/BANAM/new/BANAM.Rcheck/BANAM’ + + +``` +### CRAN + +``` +* installing *source* package ‘BANAM’ ... +** package ‘BANAM’ successfully unpacked and MD5 sums checked +** using staged installation +** R +** data +*** moving datasets to lazyload DB +** byte-compile and prepare package for lazy loading +Error: package or namespace load failed for ‘BFpack’ in dyn.load(file, DLLpath = DLLpath, ...): + unable to load shared object '/home/pavel/Documents/Research/Software/statnet/statnet.common/revdep/library/BANAM/gsl/libs/gsl.so': + libgsl.so.27: cannot open shared object file: No such file or directory +Execution halted +ERROR: lazy loading failed for package ‘BANAM’ +* removing ‘/home/pavel/Documents/Research/Software/statnet/statnet.common/revdep/checks/BANAM/old/BANAM.Rcheck/BANAM’ + + +``` # BasketballAnalyzeR
@@ -47,7 +109,7 @@ Run `revdepcheck::revdep_details(, "amen")` for more info * GitHub: https://github.com/sndmrc/BasketballAnalyzeR * Source code: https://github.com/cran/BasketballAnalyzeR * Date/Publication: 2020-06-26 09:00:11 UTC -* Number of recursive dependencies: 85 +* Number of recursive dependencies: 77 Run `revdepcheck::revdep_details(, "BasketballAnalyzeR")` for more info @@ -62,15 +124,93 @@ Run `revdepcheck::revdep_details(, "BasketballAnalyzeR")` for more info All declared Imports should be used. ``` +# BFpack + +
+ +* Version: 1.3.0 +* GitHub: https://github.com/jomulder/BFpack +* Source code: https://github.com/cran/BFpack +* Date/Publication: 2024-06-19 10:50:02 UTC +* Number of recursive dependencies: 106 + +Run `revdepcheck::revdep_details(, "BFpack")` for more info + +
+ +## In both + +* checking whether package ‘BFpack’ can be installed ... ERROR + ``` + Installation failed. + See ‘/home/pavel/Documents/Research/Software/statnet/statnet.common/revdep/checks/BFpack/new/BFpack.Rcheck/00install.out’ for details. + ``` + +## Installation + +### Devel + +``` +* installing *source* package ‘BFpack’ ... +** package ‘BFpack’ successfully unpacked and MD5 sums checked +** using staged installation +** libs +using C compiler: ‘gcc (Debian 14.2.0-3) 14.2.0’ +using Fortran compiler: ‘GNU Fortran (Debian 14.2.0-3) 14.2.0’ +gcc -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -c BFpack_init.c -o BFpack_init.o +gfortran -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.4.1=. -fstack-protector-strong -fstack-clash-protection -fcf-protection -c bct_mixedordinal.f90 -o bct_mixedordinal.o +gfortran -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.4.1=. -fstack-protector-strong -fstack-clash-protection -fcf-protection -c bct_prior.f90 -o bct_prior.o +gcc -shared -L/usr/lib/R/lib -Wl,-z,relro -o BFpack.so BFpack_init.o bct_mixedordinal.o bct_prior.o -llapack -lblas -lgfortran -lm -lquadmath -L/usr/lib/R/lib -lR +... +*** moving datasets to lazyload DB +** inst +** byte-compile and prepare package for lazy loading +Error in dyn.load(file, DLLpath = DLLpath, ...) : + unable to load shared object '/home/pavel/Documents/Research/Software/statnet/statnet.common/revdep/library/BFpack/gsl/libs/gsl.so': + libgsl.so.27: cannot open shared object file: No such file or directory +Calls: ... asNamespace -> loadNamespace -> library.dynam -> dyn.load +Execution halted +ERROR: lazy loading failed for package ‘BFpack’ +* removing ‘/home/pavel/Documents/Research/Software/statnet/statnet.common/revdep/checks/BFpack/new/BFpack.Rcheck/BFpack’ + + +``` +### CRAN + +``` +* installing *source* package ‘BFpack’ ... +** package ‘BFpack’ successfully unpacked and MD5 sums checked +** using staged installation +** libs +using C compiler: ‘gcc (Debian 14.2.0-3) 14.2.0’ +using Fortran compiler: ‘GNU Fortran (Debian 14.2.0-3) 14.2.0’ +gcc -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.4.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -c BFpack_init.c -o BFpack_init.o +gfortran -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.4.1=. -fstack-protector-strong -fstack-clash-protection -fcf-protection -c bct_mixedordinal.f90 -o bct_mixedordinal.o +gfortran -fpic -g -O2 -ffile-prefix-map=/build/reproducible-path/r-base-4.4.1=. -fstack-protector-strong -fstack-clash-protection -fcf-protection -c bct_prior.f90 -o bct_prior.o +gcc -shared -L/usr/lib/R/lib -Wl,-z,relro -o BFpack.so BFpack_init.o bct_mixedordinal.o bct_prior.o -llapack -lblas -lgfortran -lm -lquadmath -L/usr/lib/R/lib -lR +... +*** moving datasets to lazyload DB +** inst +** byte-compile and prepare package for lazy loading +Error in dyn.load(file, DLLpath = DLLpath, ...) : + unable to load shared object '/home/pavel/Documents/Research/Software/statnet/statnet.common/revdep/library/BFpack/gsl/libs/gsl.so': + libgsl.so.27: cannot open shared object file: No such file or directory +Calls: ... asNamespace -> loadNamespace -> library.dynam -> dyn.load +Execution halted +ERROR: lazy loading failed for package ‘BFpack’ +* removing ‘/home/pavel/Documents/Research/Software/statnet/statnet.common/revdep/checks/BFpack/old/BFpack.Rcheck/BFpack’ + + +``` # BGGM
-* Version: 2.1.1 +* Version: 2.1.3 * GitHub: https://github.com/donaldRwilliams/BGGM * Source code: https://github.com/cran/BGGM -* Date/Publication: 2024-02-23 08:00:06 UTC -* Number of recursive dependencies: 202 +* Date/Publication: 2024-07-05 20:30:02 UTC +* Number of recursive dependencies: 206 Run `revdepcheck::revdep_details(, "BGGM")` for more info @@ -78,23 +218,76 @@ Run `revdepcheck::revdep_details(, "BGGM")` for more info ## In both -* checking installed package size ... NOTE +* checking whether package ‘BGGM’ can be installed ... ERROR ``` - installed size is 12.3Mb - sub-directories of 1Mb or more: - doc 3.4Mb - help 1.1Mb - libs 7.1Mb + Installation failed. + See ‘/home/pavel/Documents/Research/Software/statnet/statnet.common/revdep/checks/BGGM/new/BGGM.Rcheck/00install.out’ for details. ``` +## Installation + +### Devel + +``` +* installing *source* package ‘BGGM’ ... +** package ‘BGGM’ successfully unpacked and MD5 sums checked +** using staged installation +checking whether the C++ compiler works... yes +checking for C++ compiler default output file name... a.out +checking for suffix of executables... +checking whether we are cross compiling... no +checking for suffix of object files... o +checking whether we are using the GNU C++ compiler... yes +checking whether g++ -std=gnu++17 accepts -g... yes +... +*** moving datasets to lazyload DB +** inst +** byte-compile and prepare package for lazy loading +Error in dyn.load(file, DLLpath = DLLpath, ...) : + unable to load shared object '/home/pavel/Documents/Research/Software/statnet/statnet.common/revdep/library/BGGM/gsl/libs/gsl.so': + libgsl.so.27: cannot open shared object file: No such file or directory +Calls: ... asNamespace -> loadNamespace -> library.dynam -> dyn.load +Execution halted +ERROR: lazy loading failed for package ‘BGGM’ +* removing ‘/home/pavel/Documents/Research/Software/statnet/statnet.common/revdep/checks/BGGM/new/BGGM.Rcheck/BGGM’ + + +``` +### CRAN + +``` +* installing *source* package ‘BGGM’ ... +** package ‘BGGM’ successfully unpacked and MD5 sums checked +** using staged installation +checking whether the C++ compiler works... yes +checking for C++ compiler default output file name... a.out +checking for suffix of executables... +checking whether we are cross compiling... no +checking for suffix of object files... o +checking whether we are using the GNU C++ compiler... yes +checking whether g++ -std=gnu++17 accepts -g... yes +... +*** moving datasets to lazyload DB +** inst +** byte-compile and prepare package for lazy loading +Error in dyn.load(file, DLLpath = DLLpath, ...) : + unable to load shared object '/home/pavel/Documents/Research/Software/statnet/statnet.common/revdep/library/BGGM/gsl/libs/gsl.so': + libgsl.so.27: cannot open shared object file: No such file or directory +Calls: ... asNamespace -> loadNamespace -> library.dynam -> dyn.load +Execution halted +ERROR: lazy loading failed for package ‘BGGM’ +* removing ‘/home/pavel/Documents/Research/Software/statnet/statnet.common/revdep/checks/BGGM/old/BGGM.Rcheck/BGGM’ + + +``` # bigergm
-* Version: 1.1.0 +* Version: 1.2.1 * GitHub: NA * Source code: https://github.com/cran/bigergm -* Date/Publication: 2024-02-16 15:10:10 UTC +* Date/Publication: 2024-06-13 21:50:13 UTC * Number of recursive dependencies: 92 Run `revdepcheck::revdep_details(, "bigergm")` for more info @@ -105,9 +298,10 @@ Run `revdepcheck::revdep_details(, "bigergm")` for more info * checking installed package size ... NOTE ``` - installed size is 9.4Mb + installed size is 11.1Mb sub-directories of 1Mb or more: - libs 9.0Mb + data 1.3Mb + libs 8.9Mb ``` # bingat @@ -139,7 +333,7 @@ Run `revdepcheck::revdep_details(, "bingat")` for more info * GitHub: NA * Source code: https://github.com/cran/bootcluster * Date/Publication: 2022-01-29 22:50:03 UTC -* Number of recursive dependencies: 81 +* Number of recursive dependencies: 70 Run `revdepcheck::revdep_details(, "bootcluster")` for more info @@ -153,30 +347,6 @@ Run `revdepcheck::revdep_details(, "bootcluster")` for more info All declared Imports should be used. ``` -# broom - -
- -* Version: 1.0.6 -* GitHub: https://github.com/tidymodels/broom -* Source code: https://github.com/cran/broom -* Date/Publication: 2024-05-17 09:10:02 UTC -* Number of recursive dependencies: 302 - -Run `revdepcheck::revdep_details(, "broom")` for more info - -
- -## In both - -* checking Rd cross-references ... WARNING - ``` - Missing link or links in Rd file 'glance.survfit.Rd': - ‘summary.survfit’ - - See section 'Cross-references' in the 'Writing R Extensions' manual. - ``` - # btergm
@@ -206,7 +376,7 @@ Run `revdepcheck::revdep_details(, "btergm")` for more info * GitHub: NA * Source code: https://github.com/cran/CINNA * Date/Publication: 2023-08-08 16:40:02 UTC -* Number of recursive dependencies: 148 +* Number of recursive dependencies: 131 Run `revdepcheck::revdep_details(, "CINNA")` for more info @@ -229,7 +399,7 @@ Run `revdepcheck::revdep_details(, "CINNA")` for more info * GitHub: https://github.com/azizka/conserveR * Source code: https://github.com/cran/conserveR * Date/Publication: 2021-08-02 09:10:06 UTC -* Number of recursive dependencies: 63 +* Number of recursive dependencies: 52 Run `revdepcheck::revdep_details(, "conserveR")` for more info @@ -270,6 +440,95 @@ Run `revdepcheck::revdep_details(, "dnr")` for more info checkRd: (-1) dnr.Rd:12: Escaped LaTeX specials: \# ``` +# ecoCopula + +
+ +* Version: 1.0.2 +* GitHub: NA +* Source code: https://github.com/cran/ecoCopula +* Date/Publication: 2022-03-02 00:20:02 UTC +* Number of recursive dependencies: 114 + +Run `revdepcheck::revdep_details(, "ecoCopula")` for more info + +
+ +## In both + +* checking whether package ‘ecoCopula’ can be installed ... ERROR + ``` + Installation failed. + See ‘/home/pavel/Documents/Research/Software/statnet/statnet.common/revdep/checks/ecoCopula/new/ecoCopula.Rcheck/00install.out’ for details. + ``` + +## Installation + +### Devel + +``` +* installing *source* package ‘ecoCopula’ ... +** package ‘ecoCopula’ successfully unpacked and MD5 sums checked +** using staged installation +** R +** data +*** moving datasets to lazyload DB +** inst +** byte-compile and prepare package for lazy loading +Error: package or namespace load failed for ‘mvabund’ in dyn.load(file, DLLpath = DLLpath, ...): + unable to load shared object '/home/pavel/Documents/Research/Software/statnet/statnet.common/revdep/library/ecoCopula/mvabund/libs/mvabund.so': + libgsl.so.27: cannot open shared object file: No such file or directory +Execution halted +ERROR: lazy loading failed for package ‘ecoCopula’ +* removing ‘/home/pavel/Documents/Research/Software/statnet/statnet.common/revdep/checks/ecoCopula/new/ecoCopula.Rcheck/ecoCopula’ + + +``` +### CRAN + +``` +* installing *source* package ‘ecoCopula’ ... +** package ‘ecoCopula’ successfully unpacked and MD5 sums checked +** using staged installation +** R +** data +*** moving datasets to lazyload DB +** inst +** byte-compile and prepare package for lazy loading +Error: package or namespace load failed for ‘mvabund’ in dyn.load(file, DLLpath = DLLpath, ...): + unable to load shared object '/home/pavel/Documents/Research/Software/statnet/statnet.common/revdep/library/ecoCopula/mvabund/libs/mvabund.so': + libgsl.so.27: cannot open shared object file: No such file or directory +Execution halted +ERROR: lazy loading failed for package ‘ecoCopula’ +* removing ‘/home/pavel/Documents/Research/Software/statnet/statnet.common/revdep/checks/ecoCopula/old/ecoCopula.Rcheck/ecoCopula’ + + +``` +# econet + +
+ +* Version: 1.0.0.1 +* GitHub: NA +* Source code: https://github.com/cran/econet +* Date/Publication: 2024-07-31 10:59:28 UTC +* Number of recursive dependencies: 64 + +Run `revdepcheck::revdep_details(, "econet")` for more info + +
+ +## In both + +* checking installed files from ‘inst/doc’ ... NOTE + ``` + The following files should probably not be installed: + ‘econet.tex’ + + Consider the use of a .Rinstignore file: see ‘Writing R Extensions’, + or move the vignette sources from ‘inst/doc’ to ‘vignettes’. + ``` + # edgebundle
@@ -295,10 +554,10 @@ Run `revdepcheck::revdep_details(, "edgebundle")` for more info
-* Version: 0.46.11 +* Version: 0.46.18 * GitHub: https://github.com/gobbios/EloRating * Source code: https://github.com/cran/EloRating -* Date/Publication: 2020-03-12 16:10:14 UTC +* Date/Publication: 2024-07-15 16:40:02 UTC * Number of recursive dependencies: 69 Run `revdepcheck::revdep_details(, "EloRating")` for more info @@ -313,7 +572,7 @@ Run `revdepcheck::revdep_details(, "EloRating")` for more info ... --- re-building ‘EloRating_tutorial.Rmd’ using rmarkdown - Quitting from lines 528-569 [differentshapes] (EloRating_tutorial.Rmd) + Quitting from lines 525-568 [differentshapes] (EloRating_tutorial.Rmd) Error: processing vignette 'EloRating_tutorial.Rmd' failed with diagnostics: there is no package called 'codetools' --- failed re-building ‘EloRating_tutorial.Rmd’ @@ -325,6 +584,29 @@ Run `revdepcheck::revdep_details(, "EloRating")` for more info Execution halted ``` +# EpiModel + +
+ +* Version: 2.4.0 +* GitHub: https://github.com/EpiModel/EpiModel +* Source code: https://github.com/cran/EpiModel +* Date/Publication: 2023-06-20 18:20:05 UTC +* Number of recursive dependencies: 125 + +Run `revdepcheck::revdep_details(, "EpiModel")` for more info + +
+ +## In both + +* checking installed package size ... NOTE + ``` + installed size is 5.0Mb + sub-directories of 1Mb or more: + doc 2.8Mb + ``` + # ergm
@@ -368,7 +650,7 @@ Run `revdepcheck::revdep_details(, "ergm")` for more info * checking installed package size ... NOTE ``` - installed size is 7.1Mb + installed size is 7.2Mb sub-directories of 1Mb or more: R 1.0Mb doc 1.7Mb @@ -409,29 +691,6 @@ Run `revdepcheck::revdep_details(, "ergm.multi")` for more info Execution halted ``` -# ergm.rank - -
- -* Version: 4.1.0 -* GitHub: https://github.com/statnet/ergm.rank -* Source code: https://github.com/cran/ergm.rank -* Date/Publication: 2022-06-01 21:40:02 UTC -* Number of recursive dependencies: 60 - -Run `revdepcheck::revdep_details(, "ergm.rank")` for more info - -
- -## In both - -* checking Rd files ... NOTE - ``` - checkRd: (-1) ergm.rank-package.Rd:42: Lost braces - 42 | 1100-1128. c("\\Sexpr[results=rd,stage=build]{tools:::Rd_expr_doi(\"#1\")}", - | ^ - ``` - # ergMargins
@@ -450,7 +709,7 @@ Run `revdepcheck::revdep_details(, "ergMargins")` for more info * checking Rd cross-references ... NOTE ``` - Unknown package ‘margins’ in Rd xrefs + Package unavailable to check Rd xrefs: ‘margins’ ``` # ergmito @@ -471,9 +730,9 @@ Run `revdepcheck::revdep_details(, "ergmito")` for more info * checking installed package size ... NOTE ``` - installed size is 7.3Mb + installed size is 7.7Mb sub-directories of 1Mb or more: - libs 5.9Mb + libs 6.3Mb ``` # FinNet @@ -534,9 +793,9 @@ Run `revdepcheck::revdep_details(, "fssemR")` for more info * checking installed package size ... NOTE ``` - installed size is 22.3Mb + installed size is 24.1Mb sub-directories of 1Mb or more: - libs 21.6Mb + libs 23.4Mb ``` * checking dependencies in R code ... NOTE @@ -604,7 +863,7 @@ Run `revdepcheck::revdep_details(, "genBaRcode")` for more info * GitHub: https://github.com/donaldRwilliams/GGMncv * Source code: https://github.com/cran/GGMncv * Date/Publication: 2021-12-15 07:40:28 UTC -* Number of recursive dependencies: 183 +* Number of recursive dependencies: 174 Run `revdepcheck::revdep_details(, "GGMncv")` for more info @@ -638,7 +897,7 @@ Run `revdepcheck::revdep_details(, "GGMncv")` for more info * GitHub: NA * Source code: https://github.com/cran/GGMnonreg * Date/Publication: 2021-04-08 11:30:06 UTC -* Number of recursive dependencies: 132 +* Number of recursive dependencies: 123 Run `revdepcheck::revdep_details(, "GGMnonreg")` for more info @@ -699,10 +958,10 @@ Run `revdepcheck::revdep_details(, "ggraph")` for more info * checking installed package size ... NOTE ``` - installed size is 8.4Mb + installed size is 8.3Mb sub-directories of 1Mb or more: doc 3.9Mb - libs 2.9Mb + libs 2.8Mb ``` # GOxploreR @@ -761,27 +1020,52 @@ ERROR: lazy loading failed for package ‘GOxploreR’ ``` -# HiveR +# inferCSN
-* Version: 0.3.63 -* GitHub: https://github.com/bryanhanson/HiveR -* Source code: https://github.com/cran/HiveR -* Date/Publication: 2020-06-09 13:00:03 UTC -* Number of recursive dependencies: 64 +* Version: 1.0.8 +* GitHub: https://github.com/mengxu98/inferCSN +* Source code: https://github.com/cran/inferCSN +* Date/Publication: 2024-08-24 05:30:02 UTC +* Number of recursive dependencies: 197 -Run `revdepcheck::revdep_details(, "HiveR")` for more info +Run `revdepcheck::revdep_details(, "inferCSN")` for more info
## In both -* checking whether package ‘HiveR’ can be installed ... WARNING +* checking examples ... ERROR ``` - Found the following significant warnings: - Warning: no DISPLAY variable so Tk is not available - See ‘/home/pavel/Documents/Research/Software/statnet/statnet.common/revdep/checks/HiveR/new/HiveR.Rcheck/00install.out’ for details. + Running examples in ‘inferCSN-Ex.R’ failed + The error most likely occurred in: + + > ### Name: plot_network_heatmap + > ### Title: Plot network heatmap + > ### Aliases: plot_network_heatmap + > + > ### ** Examples + > + > data("example_matrix") + ... + > + > p1 <- plot_network_heatmap( + + example_ground_truth[, 1:3], + + heatmap_title = "Ground truth", + + legend_name = "Ground truth" + + ) + Error in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]]) : + there is no package called ‘S4Vectors’ + Calls: plot_network_heatmap ... loadNamespace -> withRestarts -> withOneRestart -> doWithOneRestart + Execution halted + ``` + +* checking installed package size ... NOTE + ``` + installed size is 22.1Mb + sub-directories of 1Mb or more: + libs 20.8Mb ``` # InflectSSP @@ -792,7 +1076,7 @@ Run `revdepcheck::revdep_details(, "HiveR")` for more info * GitHub: NA * Source code: https://github.com/cran/InflectSSP * Date/Publication: 2023-04-19 08:00:03 UTC -* Number of recursive dependencies: 96 +* Number of recursive dependencies: 85 Run `revdepcheck::revdep_details(, "InflectSSP")` for more info @@ -806,6 +1090,25 @@ Run `revdepcheck::revdep_details(, "InflectSSP")` for more info All declared Imports should be used. ``` +# KinMixLite + +
+ +* Version: 2.1.0 +* GitHub: NA +* Source code: https://github.com/cran/KinMixLite +* Date/Publication: 2023-04-09 12:50:02 UTC +* Number of recursive dependencies: 49 + +Run `revdepcheck::revdep_details(, "KinMixLite")` for more info + +
+ +## In both + +* R CMD check timed out + + # latentnet
@@ -814,7 +1117,7 @@ Run `revdepcheck::revdep_details(, "InflectSSP")` for more info * GitHub: https://github.com/statnet/latentnet * Source code: https://github.com/cran/latentnet * Date/Publication: 2024-02-19 19:40:02 UTC -* Number of recursive dependencies: 114 +* Number of recursive dependencies: 110 Run `revdepcheck::revdep_details(, "latentnet")` for more info @@ -871,9 +1174,9 @@ Run `revdepcheck::revdep_details(, "lolog")` for more info * checking installed package size ... NOTE ``` - installed size is 26.9Mb + installed size is 29.0Mb sub-directories of 1Mb or more: - libs 25.3Mb + libs 27.3Mb ``` * checking whether startup messages can be suppressed ... NOTE @@ -899,11 +1202,11 @@ Run `revdepcheck::revdep_details(, "lolog")` for more info
-* Version: 0.4.4 +* Version: 1.1.0 * GitHub: https://github.com/stocnet/manynet * Source code: https://github.com/cran/manynet -* Date/Publication: 2024-03-15 19:20:10 UTC -* Number of recursive dependencies: 142 +* Date/Publication: 2024-09-12 22:10:10 UTC +* Number of recursive dependencies: 147 Run `revdepcheck::revdep_details(, "manynet")` for more info @@ -913,8 +1216,6 @@ Run `revdepcheck::revdep_details(, "manynet")` for more info * checking package dependencies ... NOTE ``` - Package suggested but not available for checking: ‘gifski’ - Package which this enhances but not available for checking: ‘Rgraphviz’ ``` @@ -952,7 +1253,7 @@ Run `revdepcheck::revdep_details(, "MBCbook")` for more info * GitHub: NA * Source code: https://github.com/cran/MRPC * Date/Publication: 2022-04-11 14:32:34 UTC -* Number of recursive dependencies: 184 +* Number of recursive dependencies: 170 Run `revdepcheck::revdep_details(, "MRPC")` for more info @@ -1006,47 +1307,6 @@ ERROR: lazy loading failed for package ‘MRPC’ ``` -# ndtv - -
- -* Version: 0.13.3 -* GitHub: https://github.com/statnet/ndtv -* Source code: https://github.com/cran/ndtv -* Date/Publication: 2022-11-20 22:10:05 UTC -* Number of recursive dependencies: 85 - -Run `revdepcheck::revdep_details(, "ndtv")` for more info - -
- -## In both - -* checking Rd files ... NOTE - ``` - checkRd: (-1) render.d3movie.Rd:104: Lost braces in \itemize; meant \describe ? - checkRd: (-1) render.d3movie.Rd:105: Lost braces in \itemize; meant \describe ? - checkRd: (-1) render.d3movie.Rd:106: Lost braces in \itemize; meant \describe ? - checkRd: (-1) render.d3movie.Rd:107: Lost braces in \itemize; meant \describe ? - checkRd: (-1) render.d3movie.Rd:108: Lost braces in \itemize; meant \describe ? - checkRd: (-1) render.d3movie.Rd:109: Lost braces in \itemize; meant \describe ? - checkRd: (-1) render.d3movie.Rd:110: Lost braces in \itemize; meant \describe ? - checkRd: (-1) render.d3movie.Rd:111: Lost braces in \itemize; meant \describe ? - checkRd: (-1) render.d3movie.Rd:112: Lost braces in \itemize; meant \describe ? - checkRd: (-1) render.d3movie.Rd:113: Lost braces in \itemize; meant \describe ? - ... - checkRd: (-1) render.d3movie.Rd:126: Lost braces in \itemize; meant \describe ? - checkRd: (-1) render.d3movie.Rd:127: Lost braces in \itemize; meant \describe ? - checkRd: (-1) render.d3movie.Rd:136: Lost braces in \itemize; meant \describe ? - checkRd: (-1) render.d3movie.Rd:137: Lost braces in \itemize; meant \describe ? - checkRd: (-1) render.d3movie.Rd:138: Lost braces in \itemize; meant \describe ? - checkRd: (-1) render.d3movie.Rd:139: Lost braces in \itemize; meant \describe ? - checkRd: (-1) render.d3movie.Rd:141: Lost braces in \itemize; meant \describe ? - checkRd: (-1) render.d3movie.Rd:142: Lost braces in \itemize; meant \describe ? - checkRd: (-1) render.d3movie.Rd:143: Lost braces in \itemize; meant \describe ? - checkRd: (-1) render.d3movie.Rd:144: Lost braces in \itemize; meant \describe ? - ``` - # netdiffuseR
@@ -1065,21 +1325,21 @@ Run `revdepcheck::revdep_details(, "netdiffuseR")` for more info * checking installed package size ... NOTE ``` - installed size is 13.4Mb + installed size is 14.2Mb sub-directories of 1Mb or more: doc 2.5Mb - libs 9.1Mb + libs 9.9Mb ``` # netmediate
-* Version: 0.1.4 +* Version: 1.0.1 * GitHub: NA * Source code: https://github.com/cran/netmediate -* Date/Publication: 2024-02-21 23:20:09 UTC -* Number of recursive dependencies: 105 +* Date/Publication: 2024-06-19 08:40:07 UTC +* Number of recursive dependencies: 89 Run `revdepcheck::revdep_details(, "netmediate")` for more info @@ -1134,7 +1394,7 @@ Run `revdepcheck::revdep_details(, "networkABC")` for more info * GitHub: https://github.com/jongheepark/NetworkChange * Source code: https://github.com/cran/NetworkChange * Date/Publication: 2022-03-04 07:30:02 UTC -* Number of recursive dependencies: 131 +* Number of recursive dependencies: 122 Run `revdepcheck::revdep_details(, "NetworkChange")` for more info @@ -1207,7 +1467,7 @@ Run `revdepcheck::revdep_details(, "networkDynamicData")` for more info * GitHub: NA * Source code: https://github.com/cran/NetworkExtinction * Date/Publication: 2023-03-31 11:40:02 UTC -* Number of recursive dependencies: 100 +* Number of recursive dependencies: 101 Run `revdepcheck::revdep_details(, "NetworkExtinction")` for more info @@ -1290,7 +1550,7 @@ Run `revdepcheck::revdep_details(, "relevent")` for more info * GitHub: NA * Source code: https://github.com/cran/RHMS * Date/Publication: 2021-09-27 15:50:02 UTC -* Number of recursive dependencies: 95 +* Number of recursive dependencies: 85 Run `revdepcheck::revdep_details(, "RHMS")` for more info @@ -1338,10 +1598,10 @@ Run `revdepcheck::revdep_details(, "RSiena")` for more info * checking installed package size ... NOTE ``` - installed size is 20.1Mb + installed size is 20.5Mb sub-directories of 1Mb or more: R 1.0Mb - libs 18.6Mb + libs 19.0Mb ``` # sand @@ -1352,7 +1612,7 @@ Run `revdepcheck::revdep_details(, "RSiena")` for more info * GitHub: https://github.com/kolaczyk/sand * Source code: https://github.com/cran/sand * Date/Publication: 2020-07-02 07:20:06 UTC -* Number of recursive dependencies: 155 +* Number of recursive dependencies: 147 Run `revdepcheck::revdep_details(, "sand")` for more info @@ -1461,6 +1721,31 @@ Run `revdepcheck::revdep_details(, "spaceNet")` for more info ## In both +* checking examples ... ERROR + ``` + Running examples in ‘spaceNet-Ex.R’ failed + The error most likely occurred in: + + > ### Name: multiNet + > ### Title: Latent Space Models for Multivariate Networks + > ### Aliases: multiNet print.multiNet + > + > ### ** Examples + > + > data(vickers) + ... + > + > it <- 10 # small number of iterations just for example + > + > # 2-dimensional latent space model, no covariates + > mod <- multiNet(vickers, niter = it, D = 2) + Error in dyn.load(file, DLLpath = DLLpath, ...) : + unable to load shared object '/home/pavel/Documents/Research/Software/statnet/statnet.common/revdep/library/spaceNet/RcppZiggurat/libs/RcppZiggurat.so': + libgsl.so.27: cannot open shared object file: No such file or directory + Calls: multiNet ... asNamespace -> loadNamespace -> library.dynam -> dyn.load + Execution halted + ``` + * checking Rd files ... NOTE ``` checkRd: (-1) heuSearch.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly @@ -1562,7 +1847,7 @@ Run `revdepcheck::revdep_details(, "stargazer")` for more info * GitHub: https://github.com/statnet/statnet * Source code: https://github.com/cran/statnet * Date/Publication: 2019-06-14 08:00:06 UTC -* Number of recursive dependencies: 100 +* Number of recursive dependencies: 113 Run `revdepcheck::revdep_details(, "statnet")` for more info @@ -1583,27 +1868,6 @@ Run `revdepcheck::revdep_details(, "statnet")` for more info message which cannot be suppressed: see ?packageStartupMessage. ``` -# statnetWeb - -
- -* Version: 0.5.6 -* GitHub: NA -* Source code: https://github.com/cran/statnetWeb -* Date/Publication: 2020-08-05 18:00:03 UTC -* Number of recursive dependencies: 66 - -Run `revdepcheck::revdep_details(, "statnetWeb")` for more info - -
- -## In both - -* checking LazyData ... NOTE - ``` - 'LazyData' is specified without a 'data' directory - ``` - # tergm
@@ -1637,11 +1901,11 @@ Run `revdepcheck::revdep_details(, "tergm")` for more info
-* Version: 1.39.3 +* Version: 1.39.4 * GitHub: https://github.com/leifeld/texreg * Source code: https://github.com/cran/texreg -* Date/Publication: 2023-11-10 00:00:03 UTC -* Number of recursive dependencies: 103 +* Date/Publication: 2024-07-24 12:20:01 UTC +* Number of recursive dependencies: 109 Run `revdepcheck::revdep_details(, "texreg")` for more info @@ -1653,19 +1917,18 @@ Run `revdepcheck::revdep_details(, "texreg")` for more info ``` Packages which this enhances but not available for checking: 'AER', 'alpaca', 'betareg', 'Bergm', 'bife', 'biglm', 'brglm', - 'brms', 'btergm', 'dynlm', 'eha', 'erer', 'ergm', 'feisr', 'fGarch', + 'brms', 'btergm', 'dynlm', 'eha', 'ergm', 'feisr', 'fGarch', 'fixest', 'forecast', 'gamlss', 'gamlss.inf', 'gee', 'glmmTMB', 'gmm', 'gnm', 'h2o', 'latentnet', 'lfe', 'logitr', 'lqmm', 'maxLik', - 'metaSEM', 'mfx', 'mhurdle', 'miceadds', 'mlogit', 'mnlogit', - 'MuMIn', 'oglmx', 'ordinal', 'pglm', 'plm', 'relevent', 'rms', - 'robust', 'simex', 'spatialreg', 'spdep', 'speedglm', 'truncreg', - 'VGAM', 'Zelig' + 'metaSEM', 'mfx', 'mhurdle', 'miceadds', 'mlogit', 'MuMIn', 'oglmx', + 'ordinal', 'pglm', 'plm', 'relevent', 'remify', 'remstats', + 'remstimate', 'rms', 'robust', 'simex', 'spatialreg', 'spdep', + 'speedglm', 'truncreg', 'VGAM' ``` * checking Rd cross-references ... NOTE ``` - Packages unavailable to check Rd xrefs: ‘h2o’, ‘spatialreg’, ‘eha’, ‘MuMIn’, ‘Bergm’, ‘mfx’, ‘betareg’, ‘bife’, ‘biglm’, ‘brglm’, ‘brms’, ‘btergm’, ‘ordinal’, ‘dynlm’, ‘ergm’, ‘latentnet’, ‘forecast’, ‘fGarch’, ‘alpaca’, ‘feisr’, ‘lfe’, ‘fixest’, ‘gamlss’, ‘gamlss.inf’, ‘gee’, ‘gmm’, ‘miceadds’, ‘glmmTMB’, ‘gnm’, ‘AER’, ‘robust’, ‘lqmm’, ‘rms’, ‘erer’, ‘maxLik’, ‘mlogit’, ‘oglmx’, ‘plm’, ‘pglm’, ‘relevent’, ‘simex’, ‘speedglm’, ‘truncreg’, ‘VGAM’, ‘metaSEM’ - Unknown package ‘mhurdle’ in Rd xrefs + Packages unavailable to check Rd xrefs: ‘h2o’, ‘spatialreg’, ‘eha’, ‘MuMIn’, ‘Bergm’, ‘mfx’, ‘betareg’, ‘bife’, ‘biglm’, ‘brglm’, ‘brms’, ‘btergm’, ‘ordinal’, ‘dynlm’, ‘ergm’, ‘latentnet’, ‘forecast’, ‘fGarch’, ‘alpaca’, ‘feisr’, ‘lfe’, ‘fixest’, ‘gamlss’, ‘gamlss.inf’, ‘gee’, ‘gmm’, ‘miceadds’, ‘glmmTMB’, ‘gnm’, ‘AER’, ‘robust’, ‘lqmm’, ‘rms’, ‘maxLik’, ‘mhurdle’, ‘mlogit’, ‘oglmx’, ‘plm’, ‘pglm’, ‘relevent’, ‘remstimate’, ‘simex’, ‘speedglm’, ‘truncreg’, ‘VGAM’, ‘metaSEM’ ``` # tip @@ -1676,7 +1939,7 @@ Run `revdepcheck::revdep_details(, "texreg")` for more info * GitHub: NA * Source code: https://github.com/cran/tip * Date/Publication: 2022-11-14 17:30:02 UTC -* Number of recursive dependencies: 112 +* Number of recursive dependencies: 101 Run `revdepcheck::revdep_details(, "tip")` for more info @@ -1691,56 +1954,6 @@ Run `revdepcheck::revdep_details(, "tip")` for more info | ^ ``` -# VineCopula - -
- -* Version: 2.5.0 -* GitHub: https://github.com/tnagler/VineCopula -* Source code: https://github.com/cran/VineCopula -* Date/Publication: 2023-07-10 19:00:11 UTC -* Number of recursive dependencies: 67 - -Run `revdepcheck::revdep_details(, "VineCopula")` for more info - -
- -## In both - -* checking Rd files ... NOTE - ``` - checkRd: (-1) RVineMatrix.Rd:90: Lost braces in \itemize; \value handles \item{}{} directly - checkRd: (-1) RVineMatrix.Rd:91: Lost braces in \itemize; \value handles \item{}{} directly - checkRd: (-1) RVineMatrix.Rd:92: Lost braces in \itemize; \value handles \item{}{} directly - ``` - -* checking Rd cross-references ... NOTE - ``` - Package unavailable to check Rd xrefs: ‘copula’ - ``` - -# webSDM - -
- -* Version: 1.1-4 -* GitHub: https://github.com/giopogg/webSDM -* Source code: https://github.com/cran/webSDM -* Date/Publication: 2023-09-18 17:00:02 UTC -* Number of recursive dependencies: 201 - -Run `revdepcheck::revdep_details(, "webSDM")` for more info - -
- -## In both - -* checking Rd files ... NOTE - ``` - checkRd: (-1) predict.SDMfit.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly - checkRd: (-1) predict.SDMfit.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly - ``` - # WOTPLY
@@ -1749,7 +1962,7 @@ Run `revdepcheck::revdep_details(, "webSDM")` for more info * GitHub: NA * Source code: https://github.com/cran/WOTPLY * Date/Publication: 2022-09-12 07:43:01 UTC -* Number of recursive dependencies: 82 +* Number of recursive dependencies: 71 Run `revdepcheck::revdep_details(, "WOTPLY")` for more info @@ -1771,7 +1984,7 @@ Run `revdepcheck::revdep_details(, "WOTPLY")` for more info * GitHub: NA * Source code: https://github.com/cran/WRSS * Date/Publication: 2022-05-29 18:10:02 UTC -* Number of recursive dependencies: 108 +* Number of recursive dependencies: 85 Run `revdepcheck::revdep_details(, "WRSS")` for more info