diff --git a/man/bcancer.Rd b/man/bcancer.Rd index 9e995ad..1cf7923 100644 --- a/man/bcancer.Rd +++ b/man/bcancer.Rd @@ -4,7 +4,8 @@ \name{bcancer} \alias{bcancer} \title{Breast cancer Wisconsin data set} -\format{A data frame with 699 observations on the following 11 variables. +\format{ +A data frame with 699 observations on the following 11 variables. \describe{ \item{ID}{Sample ID} \item{clump_thickness}{as integer from 1 - 10} @@ -17,7 +18,8 @@ \item{normal_nucleoli}{as integer from 1 - 10} \item{mitoses}{as integer from 1 - 10} \item{class}{benign or malignant} -}} +} +} \description{ Dataset containing the original Wisconsin breast cancer data. } diff --git a/man/brittleness.Rd b/man/brittleness.Rd index 5c48623..3141d77 100644 --- a/man/brittleness.Rd +++ b/man/brittleness.Rd @@ -4,12 +4,14 @@ \name{brittleness} \alias{brittleness} \title{Brittleness index data set} -\format{A data frame with 23 observations on the following 3 variables. +\format{ +A data frame with 23 observations on the following 3 variables. \describe{ \item{TK104}{Brittleness for batches of raw material in reactor 104} \item{TK105}{Brittleness for batches of raw material in reactor 105} \item{TK107}{Brittleness for batches of raw material in reactor 107} -}} +} +} \source{ \url{https://openmv.net/info/brittleness-index} } diff --git a/man/chorizonDL.Rd b/man/chorizonDL.Rd index 461d4a8..c26ba09 100644 --- a/man/chorizonDL.Rd +++ b/man/chorizonDL.Rd @@ -4,7 +4,8 @@ \name{chorizonDL} \alias{chorizonDL} \title{C-horizon of the Kola data with missing values} -\format{A data frame with 606 observations on the following 110 variables. +\format{ +A data frame with 606 observations on the following 110 variables. \describe{ \item{*ID}{a numeric vector} \item{XCOO}{a numeric vector} \item{YCOO}{a numeric vector} \item{Ag}{a numeric vector} \item{Ag_INAA}{a numeric vector} \item{Al}{a @@ -63,7 +64,8 @@ numeric vector} \item{K_XRF}{a numeric vector} \item{Mg_XRF}{a numeric vector} \item{Mn_XRF}{a numeric vector} \item{Na_XRF}{a numeric vector} \item{P_XRF}{a numeric vector} \item{Si_XRF}{a numeric vector} -\item{Ti_XRF}{a numeric vector} }} +\item{Ti_XRF}{a numeric vector} } +} \source{ Kola Project (1993-1998) } diff --git a/man/colic.Rd b/man/colic.Rd index b8e94aa..534f3ef 100644 --- a/man/colic.Rd +++ b/man/colic.Rd @@ -4,7 +4,8 @@ \name{colic} \alias{colic} \title{Colic horse data set} -\format{A training data frame with 300 observations on the following 31 variables. +\format{ +A training data frame with 300 observations on the following 31 variables. \describe{ \item{surgery}{yes or no} \item{age}{1 equals an adult horse, 2 is a horse younger than 6 months} @@ -47,7 +48,8 @@ The higher the level of protein the more likely it is to have a compromised gut. \item{temp_extreme_ordered}{temperature of extremities (ordered)} \item{mucous_membranes_col}{mucous membranes. A subjective measurement of colour } \item{mucous_membranes_group}{different recodings of mucous membrances} -}} +} +} \source{ \url{https://archive.ics.uci.edu/ml/datasets/Horse+Colic} Creators: Mary McLeish & Matt Cecile, Department of Computer Science, University of Guelph, diff --git a/man/diabetes.Rd b/man/diabetes.Rd index 78daa4b..520376e 100644 --- a/man/diabetes.Rd +++ b/man/diabetes.Rd @@ -4,7 +4,8 @@ \name{diabetes} \alias{diabetes} \title{Indian Prime Diabetes Data} -\format{A data frame with 768 observations on the following 9 variables. +\format{ +A data frame with 768 observations on the following 9 variables. \describe{ \item{Pregnancies}{Number of times pregnant} \item{Glucose}{Plasma glucose concentration a 2 hours in an oral glucose tolerance test} @@ -15,7 +16,8 @@ \item{DiabetesPedigreeFunction}{Diabetes pedigree function} \item{Age}{Age in years} \item{Outcome}{Diabetes (yes or no)} -}} +} +} \source{ \url{https://www.kaggle.com/uciml/pima-indians-diabetes-database/data} } diff --git a/man/food.Rd b/man/food.Rd index 53c5f3d..10b44fe 100644 --- a/man/food.Rd +++ b/man/food.Rd @@ -4,7 +4,9 @@ \name{food} \alias{food} \title{Food consumption} -\format{A data frame with 16 observations on the following 21 variables.} +\format{ +A data frame with 16 observations on the following 21 variables. +} \source{ \url{https://openmv.net/info/food-consumption} } diff --git a/man/gowerD.Rd b/man/gowerD.Rd index e12ecd6..3432320 100644 --- a/man/gowerD.Rd +++ b/man/gowerD.Rd @@ -55,12 +55,12 @@ returnIndex=TRUE: a named list with "ind" containing the requested indices and " \examples{ data(sleep) # all variables used as numerical -gowerD(sleep) +gowerD(sleep) -# split in numerical an +# split in numerical an gowerD(sleep, numerical = c("BodyWgt", "BrainWgt", "NonD", "Dream", "Sleep", "Span", "Gest"), orders = c("Pred","Exp","Danger"), levOrders = c(5,5,5)) - + # as before but only returning the index of the closest observation gowerD(sleep, numerical = c("BodyWgt", "BrainWgt", "NonD", "Dream", "Sleep", "Span", "Gest"), orders = c("Pred","Exp","Danger"), levOrders = c(5,5,5), returnIndex = TRUE) diff --git a/man/pulplignin.Rd b/man/pulplignin.Rd index 4ae39b6..552d40f 100644 --- a/man/pulplignin.Rd +++ b/man/pulplignin.Rd @@ -4,7 +4,9 @@ \name{pulplignin} \alias{pulplignin} \title{Pulp lignin content} -\format{A data frame with 301 observations on the following 23 variables.} +\format{ +A data frame with 301 observations on the following 23 variables. +} \source{ \url{https://openmv.net/info/kamyr-digester} } diff --git a/man/sleep.Rd b/man/sleep.Rd index f93510a..98ca9c2 100644 --- a/man/sleep.Rd +++ b/man/sleep.Rd @@ -4,13 +4,15 @@ \name{sleep} \alias{sleep} \title{Mammal sleep data} -\format{A data frame with 62 observations on the following 10 variables. +\format{ +A data frame with 62 observations on the following 10 variables. \describe{ \item{BodyWgt}{a numeric vector} \item{BrainWgt}{a numeric vector} \item{NonD}{a numeric vector} \item{Dream}{a numeric vector} \item{Sleep}{a numeric vector} \item{Span}{a numeric vector} \item{Gest}{a numeric vector} \item{Pred}{a numeric vector} \item{Exp}{a -numeric vector} \item{Danger}{a numeric vector} }} +numeric vector} \item{Danger}{a numeric vector} } +} \source{ Allison, T. and Chichetti, D. (1976) Sleep in mammals: ecological and constitutional correlates. \emph{Science} \strong{194 (4266)}, 732--734. diff --git a/man/tao.Rd b/man/tao.Rd index a8b7f74..8e16382 100644 --- a/man/tao.Rd +++ b/man/tao.Rd @@ -4,13 +4,15 @@ \name{tao} \alias{tao} \title{Tropical Atmosphere Ocean (TAO) project data} -\format{A data frame with 736 observations on the following 8 variables. +\format{ +A data frame with 736 observations on the following 8 variables. \describe{ \item{Year}{a numeric vector} \item{Latitude}{a numeric vector} \item{Longitude}{a numeric vector} \item{Sea.Surface.Temp}{a numeric vector} \item{Air.Temp}{a numeric vector} \item{Humidity}{a numeric vector} \item{UWind}{a numeric vector} \item{VWind}{a numeric -vector} }} +vector} } +} \source{ \url{http://www.pmel.noaa.gov/tao/} } diff --git a/man/testdata.Rd b/man/testdata.Rd index 70bf546..a8bb246 100644 --- a/man/testdata.Rd +++ b/man/testdata.Rd @@ -4,7 +4,8 @@ \name{testdata} \alias{testdata} \title{Simulated data set for testing purpose} -\format{The format is: List of 4 +\format{ +The format is: List of 4 \itemize{ \item \verb{$wna} : a \code{data.frame} with 500 obs. of 8 variables: \itemize{ @@ -30,7 +31,8 @@ } \item \verb{$mixed}: \code{c("m1", "m2")} \item \verb{$outlierInd}: `NULL`` -}} +} +} \description{ 2 numeric, 2 binary, 2 nominal and 2 mixed (semi-continous) variables } diff --git a/man/toydataMiss.Rd b/man/toydataMiss.Rd index 9cbe02e..340586c 100644 --- a/man/toydataMiss.Rd +++ b/man/toydataMiss.Rd @@ -4,8 +4,10 @@ \name{toydataMiss} \alias{toydataMiss} \title{Simulated toy data set for examples} -\format{data frame with 100 observations and 12 variables. The first two -variables represent the fully observed data.} +\format{ +data frame with 100 observations and 12 variables. The first two +variables represent the fully observed data. +} \description{ A 2-dimensional data set with additional information. } diff --git a/man/wine.Rd b/man/wine.Rd index b27d559..6559255 100644 --- a/man/wine.Rd +++ b/man/wine.Rd @@ -4,7 +4,8 @@ \name{wine} \alias{wine} \title{Wine tasting and price} -\format{A data frame with 9627 observations on the following 9 variables. +\format{ +A data frame with 9627 observations on the following 9 variables. \describe{ \item{country}{country of origin} \item{points}{the number of points WineEnthusiast rated the wine on a scale of 1-100 @@ -16,7 +17,8 @@ \item{variety}{the type of grapes used to make the wine (ie pinot noir)} \item{winery}{the winery that made the wine} \item{variety_main}{broader category as variety} -}} +} +} \source{ \url{https://www.kaggle.com/zynicide/wine-reviews} }