pyproject.toml

[build-system]
requires = ["scikit-build-core"]
build-backend = "scikit_build_core.build"

[project]
name = "hammingdist"
version = "1.3.0"
description = "A fast tool to calculate Hamming distances"
readme = "README.md"
license = {text = "MIT"}
authors=[{name="Liam Keegan", email="ssc@iwr.uni-heidelberg.de"}, {name="Dominic Kempf", email="ssc@iwr.uni-heidelberg.de"}]
requires-python = ">=3.7"
classifiers=[
    "Topic :: Scientific/Engineering :: Bio-Informatics",
    "License :: OSI Approved :: MIT License",
    "Intended Audience :: Science/Research",
    "Intended Audience :: Education",
    "Programming Language :: C++",
    "Programming Language :: Python :: 3 :: Only",
    "Programming Language :: Python :: 3.7",
    "Programming Language :: Python :: 3.8",
    "Programming Language :: Python :: 3.9",
    "Programming Language :: Python :: 3.10",
    "Programming Language :: Python :: 3.11",
    "Programming Language :: Python :: 3.12",
    "Programming Language :: Python :: 3.13",
    "Programming Language :: Python :: Implementation :: CPython",
    "Programming Language :: Python :: Implementation :: PyPy",
    "Operating System :: MacOS :: MacOS X",
    "Operating System :: Microsoft :: Windows",
    "Operating System :: POSIX :: Linux",
]

[project.urls]
Github = "https://github.com/ssciwr/hammingdist"
Issues = "https://github.com/ssciwr/hammingdist/issues"

[project.optional-dependencies]
test = ["pytest", "numpy"]

[tool.scikit-build]
cmake.version = ">=3.23"
build.verbose = true

[tool.scikit-build.cmake.define]
BUILD_TESTING = "OFF"
HAMMING_BUILD_BENCHMARKS = "OFF"
HAMMING_BUILD_PYTHON = "ON"

[tool.cibuildwheel]
skip = "*-manylinux_i686 *-musllinux*"
test-skip = "pp* cp313-manylinux_x86_64"
test-extras = "test"
test-command = "pytest {project}/python/tests -v"
environment = { BLAS="None", LAPACK="None", ATLAS="None" }
build-verbosity = 3

[tool.cibuildwheel.linux]
environment = { CMAKE_ARGS="-DHAMMING_WITH_OPENMP=ON -DHAMMING_WITH_CUDA=ON" }

[[tool.cibuildwheel.overrides]]
select = "*-macosx_arm64*"
environment = { CMAKE_ARGS="-DHAMMING_WITH_SSE2=OFF -DHAMMING_WITH_AVX2=OFF -DHAMMING_WITH_AVX512=OFF -DHAMMING_WITH_NEON=ON" }