From cb405c6da58a1ea39c5502b623fd263f19b4091b Mon Sep 17 00:00:00 2001 From: David Laehnemann Date: Tue, 30 Jan 2024 14:17:46 +0100 Subject: [PATCH] extend CHANGELOG.md for PR overgrowth --- CHANGELOG.md | 5 +++++ 1 file changed, 5 insertions(+) diff --git a/CHANGELOG.md b/CHANGELOG.md index 34e0401b..233f5246 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -6,6 +6,11 @@ ### Bug Fixes * canonical transcript mapped read extraction ([#77](https://github.com/snakemake-workflows/rna-seq-kallisto-sleuth/issues/77)) ([52b56b0](https://github.com/snakemake-workflows/rna-seq-kallisto-sleuth/commit/52b56b022729dac745724cf60266e88f55359cb3)) +* the above pull request also accumulated a number of other bug fixes and updates: + * QuantSeq data now also works with standard canonical transcripts, when MANE transcripts are not available for a species + * some environment and wrapper updates and fixes, e.g. biomart, pysam, sleuth, datavzrd + * some overall cleanup of the QuantSeq parts of the workflow + * proper QuantSeq testing data, [generated with a dedicated workflow](https://github.com/dlaehnemann/create-quant-seq-testing-dataset) and [hosted on Zenodo](https://zenodo.org/doi/10.5281/zenodo.10572745), which enables a quick and useful testing for the respective parts of the workflow ## [2.5.2](https://github.com/snakemake-workflows/rna-seq-kallisto-sleuth/compare/v2.5.1...v2.5.2) (2023-09-14)