From f64dddb33e389e9facddadc362910158bc8a6ca8 Mon Sep 17 00:00:00 2001 From: Tom White Date: Tue, 8 Oct 2024 16:43:47 +0100 Subject: [PATCH] Use dev version of bio2zarr for testing NumPy 2 --- .github/workflows/build-numpy-2.yml | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/.github/workflows/build-numpy-2.yml b/.github/workflows/build-numpy-2.yml index 706500d2a..0374905b8 100644 --- a/.github/workflows/build-numpy-2.yml +++ b/.github/workflows/build-numpy-2.yml @@ -23,7 +23,8 @@ jobs: run: | python -m pip install --upgrade pip pip install -r requirements.txt -r requirements-dev.txt - pip install -U 'numpy<2.1' + # update bio2zarr for NumPy 2, see https://github.com/sgkit-dev/bio2zarr/issues/256 + pip install -U 'numpy<2.1' -U git+https://github.com/sgkit-dev/bio2zarr.git - name: Run pre-commit uses: pre-commit/action@v2.0.0 - name: Test with pytest (numba jit disabled)